BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0183.p (255 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773742.1| hypothetical protein Hsero_0308 [Herbaspiril... 318 4e-85 ref|ZP_08506581.1| hypothetical protein METUNv1_03670 [Methylove... 143 2e-32 ref|YP_001351701.1| hypothetical protein mma_0011 [Janthinobacte... 120 3e-25 ref|ZP_08505091.1| hypothetical protein METUNv1_02142 [Methylove... 91 1e-16 ref|ZP_05060886.1| conserved hypothetical protein [gamma proteob... 91 2e-16 >ref|YP_003773742.1| hypothetical protein Hsero_0308 [Herbaspirillum seropedicae SmR1] gb|ADJ61834.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 254 Score = 318 bits (816), Expect = 4e-85, Method: Composition-based stats. Identities = 169/217 (77%), Positives = 188/217 (86%) Query: 39 VVGQVTHLSGVLSVRHADGARVVLSVKSAILQGDTLITERETYARVKFVDNGEIVLRPGS 98 VVGQVTHLSGVL+ RHADG R VLSVKSAILQGDTLITERETY RVKFVDN EIVLRPG+ Sbjct: 38 VVGQVTHLSGVLTARHADGTRAVLSVKSAILQGDTLITERETYTRVKFVDNAEIVLRPGT 97 Query: 99 EVAVSKYLYDEKEPKNDAVAIGLVKGGLRAVTGLVGKRNHDAVNFDTPTATIGIRGTHFG 158 EVAV+KY+YDEK+P+ND+VAIGLVKGGLRAVTGLVGKRNH+AVNFDTPTATIGIRGTHFG Sbjct: 98 EVAVNKYIYDEKKPENDSVAIGLVKGGLRAVTGLVGKRNHEAVNFDTPTATIGIRGTHFG 157 Query: 159 ALYCQDDCAGVPTPSGQPPANGLHVDVVTGAIQVTNPSGSQLYSAGQFGFVPSISQPPVI 218 AL+CQ DC G+PTPSGQ PA+GLHVDV +GAI V+N G+QL++AGQFG+V QPPV+ Sbjct: 158 ALFCQADCGGIPTPSGQAPADGLHVDVASGAILVSNAGGAQLFNAGQFGYVSGPLQPPVV 217 Query: 219 VPPAQGVTVTMPPAISSNGNTGTQKIGAAKLDACVTQ 255 VP GV VTMPPAISSN N G QK+GAA CV Sbjct: 218 VPANIGVPVTMPPAISSNTNNGMQKLGAASAPDCVVH 254 >ref|ZP_08506581.1| hypothetical protein METUNv1_03670 [Methyloversatilis universalis FAM5] gb|EGK70280.1| hypothetical protein METUNv1_03670 [Methyloversatilis universalis FAM5] Length = 258 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 89/246 (36%), Positives = 133/246 (54%), Gaps = 18/246 (7%) Query: 25 LLLAVASAFAQPQPVVGQVTHLSGVLSVRHADGARVVLSVKSAILQGDTLITERETYARV 84 L LA +A P P G+V++LSG + V+ D +L+ SAI GD + TE+ T AR+ Sbjct: 16 LFLAGQAAAQTPSPAAGRVSYLSGTMYVQTNDNKTRILARDSAIYSGDVITTEKSTVARI 75 Query: 85 KFVDNGEIVLRPGSEVAVSKYLYDEKEPKNDAVAIGLVKGGLRAVTGLVGKRNHDAVNFD 144 +F D + L+P S+V + + +DE +P+ D++ LVKGGLRAVTGL+GKRN + Sbjct: 76 EFGDGSSLALKPRSQVKIDGFAFDEAKPEKDSLLYSLVKGGLRAVTGLIGKRNREGYRAS 135 Query: 145 TPTATIGIRGTHFGALYCQDDCAGVPT-----------PSGQPPANGLHVDVVTGAIQVT 193 T TATIGIRGT FG L C ++ P +G+P L DV G+I+V Sbjct: 136 TVTATIGIRGTRFGMLLCDENSKDDPACLKALEEAKDRKAGEP---ALVFDVEEGSIEVK 192 Query: 194 NPSGSQLYSAGQFGFVPSISQPPVIVPPAQGVTVTMPPAISSN----GNTGTQKIGAAKL 249 N GS+ + GQ G V + P +P G+ ++P + ++ G G+ +G+ Sbjct: 193 NEGGSKTFEVGQAGVVSNSKSAPQSLPENPGLDQSLPSSTAARPGPAGMGGSTGLGSDSD 252 Query: 250 DACVTQ 255 +C Q Sbjct: 253 ASCTVQ 258 >ref|YP_001351701.1| hypothetical protein mma_0011 [Janthinobacterium sp. Marseille] gb|ABR90895.1| Hypothetical protein mma_0011 [Janthinobacterium sp. Marseille] Length = 297 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 86/258 (33%), Positives = 126/258 (48%), Gaps = 51/258 (19%) Query: 22 ALLLLLAVASAFAQPQPVVGQVTHLSGVLSVRHADGARVVLSVKSAILQGDTLITERETY 81 ++LLL A+ +A VG VTHLSG L + A+G+ VL +KSA+ GDTL T+ ++Y Sbjct: 12 SVLLLAALCTATVVQAAGVGTVTHLSGPLLAKKANGSVRVLGMKSAVEPGDTLSTQNKSY 71 Query: 82 ARVKFVDNGEIVLRPGSEVAVSKYLYDEKEPKNDAVAIGLVKGGLRAVTGLVGKRNHDAV 141 A++KF D ++L+P + + + K+ YD +P D +A LV+GG+RA GL+GKR+ D+V Sbjct: 72 AQIKFSDGSALILQPDTVLTIDKFSYDAAKPSADNIAYTLVQGGVRANAGLLGKRSKDSV 131 Query: 142 NFDTPTATIGIRGTHFGALYCQDDCA---------------------------------- 167 TP A I ++ Y + D Sbjct: 132 QMVTPMANISMQAASVVVQYVKPDEEAVAAAREAYLLASTAVLDVAMQATRSDMPAPAAI 191 Query: 168 --------GVPTPSGQPPAN---------GLHVDVVTGAIQVTNPSGSQLYSAGQFGFVP 210 +P P+G P GL+V V+ G I VTN G+Q ++ GQFGF P Sbjct: 192 QPLMLAQINIPLPTGLTPKATGSTPPLPPGLYVQVIDGLINVTNKGGAQTFAPGQFGFTP 251 Query: 211 SISQPPVIVPPAQGVTVT 228 + Q PVIVP + T Sbjct: 252 TPIQAPVIVPKNPALQFT 269 >ref|ZP_08505091.1| hypothetical protein METUNv1_02142 [Methyloversatilis universalis FAM5] gb|EGK71637.1| hypothetical protein METUNv1_02142 [Methyloversatilis universalis FAM5] Length = 460 Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 75/219 (34%), Positives = 104/219 (47%), Gaps = 31/219 (14%) Query: 25 LLLAVASAF---AQPQPVVGQVTHLSGVLSVRHADGARVVLSVKSAILQGDTLITERETY 81 + LAVASAF A P +V +G + ADG+ VL+ + + GDT+ T Sbjct: 10 IALAVASAFPLCALANPA-ARVEFTAGEVRATGADGSSRVLARGAQVGSGDTIDTG-SGR 67 Query: 82 ARVKFVDNGEIVLRPGSEVAVSKYLYDEKEPKNDAVAIGLVKGGLRAVTGLVGKRNHDAV 141 A+++F D + L+P ++ + +Y + K P D L+KGGLR +TGLVGK N DA Sbjct: 68 AQMRFTDGALVSLQPQTQFRIDQYAFAGK-PAEDRGFFSLIKGGLRTITGLVGKGNRDAY 126 Query: 142 NFDTPTATIGIRGTHFGALYCQDDCAGVPTPSGQPPANGLHVDVVTGAIQVTNPSGSQLY 201 T ATIGIRGT + Y N ++V GAI V N G Sbjct: 127 KLTTSVATIGIRGTEYSVAY----------------GNSINVTTGDGAIDVCNGGGCLTV 170 Query: 202 SAGQFGFVPSISQPPVIV---------PPAQGVTVTMPP 231 + GQ +V + PPVI+ PP+ VT PP Sbjct: 171 TDGQSAYVADQNTPPVIIEVKTDLPPPPPSNAGMVTPPP 209 >ref|ZP_05060886.1| conserved hypothetical protein [gamma proteobacterium HTCC5015] gb|EDY87042.1| conserved hypothetical protein [gamma proteobacterium HTCC5015] Length = 655 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 61/185 (32%), Positives = 90/185 (48%), Gaps = 12/185 (6%) Query: 40 VGQVTHLSGVLSVRHADGARVVLSVKSAILQGDTLITERETYARVKFVDNGEIVLRPGSE 99 VG+V +G + +G+ L + +GDTL TE+ + A+V+F D + LRP ++ Sbjct: 102 VGRVIVSTGKSTAVSENGSERELKRGDVVYKGDTLKTEK-SRAQVRFSDGSLLALRPDTQ 160 Query: 100 VAVSKYLYDEKEPKNDAVAIGLVKGGLRAVTGLVGKRNHDAVNFDTPTATIGIRGTHFGA 159 V +Y Y ++ + L+KGG R ++G +G+ N T ATIGIRGTH+G Sbjct: 161 FKVEEYNYQGEQNGEERGFFSLIKGGFRTISGAIGQFNKQNYRVKTAVATIGIRGTHYGL 220 Query: 160 LYCQDDCAGVPTPSGQPPANGLHVDVVTGAIQVTNPSGSQLYSAGQFGFVPSISQPP--V 217 CQ +C G NGL VV G I V N G + ++ VP P + Sbjct: 221 TICQGECNG---------ENGLFGGVVDGEIVVKNDQGEFTFGNDEYFHVPGEGGKPKGL 271 Query: 218 IVPPA 222 I PP Sbjct: 272 IAPPG 276