BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0160.p (327 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773762.1| S-adenosyl-methionine-dependent methyltransf... 516 e-144 ref|YP_001101054.1| S-adenosyl-methyltransferase MraW [Herminiim... 448 e-124 ref|YP_004754596.1| S-adenosyl-methyltransferase mraW [Collimona... 442 e-122 ref|YP_001354713.1| S-adenosyl-methyltransferase MraW [Janthinob... 442 e-122 ref|ZP_08274578.1| S-adenosyl-methyltransferase MraW [Oxalobacte... 433 e-119 >ref|YP_003773762.1| S-adenosyl-methionine-dependent methyltransferase MraW protein [Herbaspirillum seropedicae SmR1] gb|ADJ61854.1| S-adenosyl-methionine-dependent methyltransferase MraW protein [Herbaspirillum seropedicae SmR1] Length = 324 Score = 516 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 304/327 (92%), Positives = 311/327 (95%), Gaps = 3/327 (0%) Query: 1 MNLQPVPELQHRTVLLEEAVDALAIAGERANGIYLDGTFGRGGHSRAILSRLGPQGRLIA 60 MNLQPVPELQHRTVLLEEAVDALAI GERANG+YLDGTFGRGGHSRAILSRLGPQGRLIA Sbjct: 1 MNLQPVPELQHRTVLLEEAVDALAIEGERANGVYLDGTFGRGGHSRAILSRLGPQGRLIA 60 Query: 61 FDKDPLAIATAQKIDDARFEIVHDSFATMDEALAARGIAQVDGVLMDLGISSPQVDDAAR 120 FDKDPLAIATAQKI D RFEIVHDSFATMD+ALA RGIA+VDGVLMDLGISSPQVDDAAR Sbjct: 61 FDKDPLAIATAQKIADPRFEIVHDSFATMDQALAERGIARVDGVLMDLGISSPQVDDAAR 120 Query: 121 GFSFRLDGPLDMRMDTTRGVSAAEWLATADEQQIAKVIRDYGEERFALQIAKKIVAGRAI 180 GFSFRLDGPLDMRMDTTRGVSAAEWLATADEQQIAKVIRDYGEERFALQIAKKIVAGRA+ Sbjct: 121 GFSFRLDGPLDMRMDTTRGVSAAEWLATADEQQIAKVIRDYGEERFALQIAKKIVAGRAV 180 Query: 181 EPISSTRQLAALVAQAVKTREKGKDPATRTFQAVRIFVNQELEELEVGLDKAFAQMAQHG 240 EPISSTRQLAALVAQAVKTREKGKDPATRTFQAVRIFVNQELEELEVGL+KAFAQMAQHG Sbjct: 181 EPISSTRQLAALVAQAVKTREKGKDPATRTFQAVRIFVNQELEELEVGLEKAFAQMAQHG 240 Query: 241 RLVVISFHSLEDRIVKQFMASKAHAPQPDRRLPIRAVDLPQAPARLLPRVMPSTDEVTAN 300 RLVVISFHSLEDRIVKQFMASKAHAPQPDRRLPIRAVDLPQAPARLLPRVMPS EV AN Sbjct: 241 RLVVISFHSLEDRIVKQFMASKAHAPQPDRRLPIRAVDLPQAPARLLPRVMPSAGEVEAN 300 Query: 301 PRARSAVMRGLERVTPVSSTTTQGAPA 327 PRARSAVMRGLE + + QGA A Sbjct: 301 PRARSAVMRGLELIV---AAPAQGASA 324 >ref|YP_001101054.1| S-adenosyl-methyltransferase MraW [Herminiimonas arsenicoxydans] sp|A4G8U6|RSMH_HERAR RecName: Full=Ribosomal RNA small subunit methyltransferase H; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH emb|CAL62933.1| S-adenosyl-dependent methyl transferase MraW [Herminiimonas arsenicoxydans] Length = 321 Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats. Identities = 243/314 (77%), Positives = 274/314 (87%) Query: 1 MNLQPVPELQHRTVLLEEAVDALAIAGERANGIYLDGTFGRGGHSRAILSRLGPQGRLIA 60 MN++ V + QHRTVLLEEAVDALA+ GERANG+Y+DGTFGRGGHSR IL RLG G L+A Sbjct: 1 MNVEAVQQYQHRTVLLEEAVDALALDGERANGMYVDGTFGRGGHSRLILQRLGENGCLLA 60 Query: 61 FDKDPLAIATAQKIDDARFEIVHDSFATMDEALAARGIAQVDGVLMDLGISSPQVDDAAR 120 FDKD AIA A I+D RF IVHDSFAT+ ALA RGIAQV+GVL+DLGISSPQVDDAAR Sbjct: 61 FDKDTQAIANAATIEDKRFAIVHDSFATLSTALAERGIAQVNGVLLDLGISSPQVDDAAR 120 Query: 121 GFSFRLDGPLDMRMDTTRGVSAAEWLATADEQQIAKVIRDYGEERFALQIAKKIVAGRAI 180 GFSFR DGPLDMRMDTTRG+SAAEWLAT EQ+I KVIR+YGEERFA QIAK IVAGRA+ Sbjct: 121 GFSFRADGPLDMRMDTTRGISAAEWLATETEQKIEKVIREYGEERFAFQIAKAIVAGRAV 180 Query: 181 EPISSTRQLAALVAQAVKTREKGKDPATRTFQAVRIFVNQELEELEVGLDKAFAQMAQHG 240 +PISSTRQLA +VA+AVKTREKGKDPATRTFQA+RIF+NQELEELEV L++A+ +A HG Sbjct: 181 QPISSTRQLAEIVARAVKTREKGKDPATRTFQAIRIFINQELEELEVVLNEAYRHLAPHG 240 Query: 241 RLVVISFHSLEDRIVKQFMASKAHAPQPDRRLPIRAVDLPQAPARLLPRVMPSTDEVTAN 300 RLVVISFHSLEDRIVKQFMASKA+ PQPDRRLPIRAVDLPQ +L+ R+ PS E++AN Sbjct: 241 RLVVISFHSLEDRIVKQFMASKANVPQPDRRLPIRAVDLPQPEMKLIARIKPSAAEISAN 300 Query: 301 PRARSAVMRGLERV 314 PRARSAVMR ER+ Sbjct: 301 PRARSAVMRVAERL 314 >ref|YP_004754596.1| S-adenosyl-methyltransferase mraW [Collimonas fungivorans Ter331] gb|AEK63773.1| S-adenosyl-methyltransferase mraW [Collimonas fungivorans Ter331] Length = 322 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 246/314 (78%), Positives = 270/314 (85%) Query: 1 MNLQPVPELQHRTVLLEEAVDALAIAGERANGIYLDGTFGRGGHSRAILSRLGPQGRLIA 60 M+ VPE QHRTVLL+EAV ALAI G RA+GIY+DGTFGRGGHSR IL LGP+GRLIA Sbjct: 1 MSESVVPEFQHRTVLLDEAVSALAITGARADGIYVDGTFGRGGHSRKILQSLGPRGRLIA 60 Query: 61 FDKDPLAIATAQKIDDARFEIVHDSFATMDEALAARGIAQVDGVLMDLGISSPQVDDAAR 120 FDKDP AIATA +I D RFEIVHDSFATM +AL RGI QVDGVL+DLGISSPQVDDA+R Sbjct: 61 FDKDPQAIATAAEIADPRFEIVHDSFATMAQALQERGIQQVDGVLLDLGISSPQVDDASR 120 Query: 121 GFSFRLDGPLDMRMDTTRGVSAAEWLATADEQQIAKVIRDYGEERFALQIAKKIVAGRAI 180 GFSFR DGPLDMRMDTTRG+SAA WLA ADEQ I KV+RDYGEERFA+QIAK IVAGR + Sbjct: 121 GFSFRADGPLDMRMDTTRGMSAAAWLAVADEQTIGKVVRDYGEERFAVQIAKAIVAGRTV 180 Query: 181 EPISSTRQLAALVAQAVKTREKGKDPATRTFQAVRIFVNQELEELEVGLDKAFAQMAQHG 240 +PI+ TRQLA +VA AVKTREKGKDPATRTFQA+RIF+NQELEELE+ LD+AF QMAQ G Sbjct: 181 QPITGTRQLAQIVANAVKTREKGKDPATRTFQAIRIFINQELEELEIVLDQAFRQMAQQG 240 Query: 241 RLVVISFHSLEDRIVKQFMASKAHAPQPDRRLPIRAVDLPQAPARLLPRVMPSTDEVTAN 300 RLVVISFHSLEDRIVKQFMASKA PQPDRRLPIRAVDLPQ +L+ RV PS EV N Sbjct: 241 RLVVISFHSLEDRIVKQFMASKARLPQPDRRLPIRAVDLPQPELKLVARVKPSDTEVADN 300 Query: 301 PRARSAVMRGLERV 314 PRARSA+MR ER+ Sbjct: 301 PRARSAIMRVGERL 314 >ref|YP_001354713.1| S-adenosyl-methyltransferase MraW [Janthinobacterium sp. Marseille] sp|A6T2G6|RSMH_JANMA RecName: Full=Ribosomal RNA small subunit methyltransferase H; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH gb|ABR88828.1| S-adenosyl-methyltransferase [Janthinobacterium sp. Marseille] Length = 322 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 241/318 (75%), Positives = 270/318 (84%) Query: 1 MNLQPVPELQHRTVLLEEAVDALAIAGERANGIYLDGTFGRGGHSRAILSRLGPQGRLIA 60 MN V + QHRTVLL+EAVDALA+ GERANG+Y+DGTFGRGGHSR IL +LG RL+A Sbjct: 1 MNADAVQQYQHRTVLLDEAVDALALGGERANGVYVDGTFGRGGHSRKILQQLGSGARLLA 60 Query: 61 FDKDPLAIATAQKIDDARFEIVHDSFATMDEALAARGIAQVDGVLMDLGISSPQVDDAAR 120 FDKD AIA A IDD RFEI HDSFAT+ EALA RGI QVDGVL+DLGISSPQVDDA R Sbjct: 61 FDKDTQAIANAATIDDQRFEIAHDSFATLSEALAVRGIKQVDGVLLDLGISSPQVDDATR 120 Query: 121 GFSFRLDGPLDMRMDTTRGVSAAEWLATADEQQIAKVIRDYGEERFALQIAKKIVAGRAI 180 GFSFR DGPLDMRMDTTRG+SAAEWLAT EQ+I KVIR+YGEERFA QIAK IVA RA+ Sbjct: 121 GFSFRADGPLDMRMDTTRGMSAAEWLATETEQKIEKVIREYGEERFAFQIAKAIVARRAV 180 Query: 181 EPISSTRQLAALVAQAVKTREKGKDPATRTFQAVRIFVNQELEELEVGLDKAFAQMAQHG 240 EPISSTRQLA +VA+ VKTREKGKDPATRTFQA+RIF+NQELEELEV L++A+ +A HG Sbjct: 181 EPISSTRQLAEIVARTVKTREKGKDPATRTFQAIRIFINQELEELEVVLNEAYRYLAPHG 240 Query: 241 RLVVISFHSLEDRIVKQFMASKAHAPQPDRRLPIRAVDLPQAPARLLPRVMPSTDEVTAN 300 RLVVISFHSLEDRIVKQFMA KA+ PQPDRRLPIRA+DLPQ +LL RV PS E++ N Sbjct: 241 RLVVISFHSLEDRIVKQFMAGKANVPQPDRRLPIRAIDLPQPEMKLLSRVKPSAAEISEN 300 Query: 301 PRARSAVMRGLERVTPVS 318 PRARSAVMR ER++P + Sbjct: 301 PRARSAVMRVAERLSPAA 318 >ref|ZP_08274578.1| S-adenosyl-methyltransferase MraW [Oxalobacteraceae bacterium IMCC9480] gb|EGF31946.1| S-adenosyl-methyltransferase MraW [Oxalobacteraceae bacterium IMCC9480] Length = 316 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 236/308 (76%), Positives = 265/308 (86%) Query: 7 PELQHRTVLLEEAVDALAIAGERANGIYLDGTFGRGGHSRAILSRLGPQGRLIAFDKDPL 66 PE HRTVLLEEAV+ALA+ G R +GIYLDGTFGRGGHSR ILS LG GRLIAFDKDP Sbjct: 3 PEFLHRTVLLEEAVEALALQGARTDGIYLDGTFGRGGHSRRILSALGAGGRLIAFDKDPQ 62 Query: 67 AIATAQKIDDARFEIVHDSFATMDEALAARGIAQVDGVLMDLGISSPQVDDAARGFSFRL 126 AIA+A +I D RF+IVHDSFAT+D AL+ARG+ VDGVL+DLGISSPQVDDAARGFSFR Sbjct: 63 AIASAGEIADPRFDIVHDSFATLDLALSARGVGLVDGVLLDLGISSPQVDDAARGFSFRA 122 Query: 127 DGPLDMRMDTTRGVSAAEWLATADEQQIAKVIRDYGEERFALQIAKKIVAGRAIEPISST 186 DGPLDMRMDTTRG+SAAEWLAT EQ I KVIR+YGEERFA QIAK I A R IEPISST Sbjct: 123 DGPLDMRMDTTRGLSAAEWLATETEQNIEKVIRNYGEERFAFQIAKAIAASRTIEPISST 182 Query: 187 RQLAALVAQAVKTREKGKDPATRTFQAVRIFVNQELEELEVGLDKAFAQMAQHGRLVVIS 246 RQLA +VA+ VKTREKGKDPATRTFQA+RI++NQELEELE+GL +A+A++A HGRLVVIS Sbjct: 183 RQLAQIVARTVKTREKGKDPATRTFQAIRIYINQELEELEIGLQQAYARLAPHGRLVVIS 242 Query: 247 FHSLEDRIVKQFMASKAHAPQPDRRLPIRAVDLPQAPARLLPRVMPSTDEVTANPRARSA 306 FHSLEDRIVK+FMASKAH QPDRRLPIRAVDLPQ L+ + PST+EV NPR+RSA Sbjct: 243 FHSLEDRIVKRFMASKAHVEQPDRRLPIRAVDLPQPEMILISKAKPSTEEVAGNPRSRSA 302 Query: 307 VMRGLERV 314 VMR +R+ Sbjct: 303 VMRVAQRL 310