BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0152.p (537 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773771.1| UDP-N-acetylmuramate-L-alanine ligase [Herba... 851 0.0 ref|YP_001101045.1| UDP-N-acetylmuramate--L-alanine ligase [Herm... 731 0.0 ref|ZP_08272729.1| UDP-N-acetylmuramate-alanine ligase [Oxalobac... 723 0.0 ref|YP_001354704.1| UDP-N-acetylmuramate--L-alanine ligase [Jant... 722 0.0 ref|YP_004754587.1| UDP-N-acetylmuramate--alanine ligase [Collim... 720 0.0 >ref|YP_003773771.1| UDP-N-acetylmuramate-L-alanine ligase [Herbaspirillum seropedicae SmR1] gb|ADJ61863.1| UDP-N-acetylmuramate-L-alanine ligase protein [Herbaspirillum seropedicae SmR1] Length = 475 Score = 851 bits (2198), Expect = 0.0, Method: Composition-based stats. Identities = 465/475 (97%), Positives = 467/475 (98%) Query: 63 MKHRVKNIHFVGIGGSGMSGIAEVLLNLGYGVSGSDLGSNAATQRLAQLGASIRYGHAAE 122 MKHRVKNIHFVGIGGSGMSGIAEVLLNLGYGVSGSDLGSNAATQRLAQLGA IRYGHAA Sbjct: 1 MKHRVKNIHFVGIGGSGMSGIAEVLLNLGYGVSGSDLGSNAATQRLAQLGACIRYGHAAG 60 Query: 123 NIEGADAIVTSTAVKGDNPEVLAARKKHIPIVPRAVMLGELMRLKKGIAIAGTHGKTTTT 182 NIEGADAIVTSTAVKGDNPEVLAARKKHIPIVPRAVMLGELMRLKKGIAIAGTHGKTTTT Sbjct: 61 NIEGADAIVTSTAVKGDNPEVLAARKKHIPIVPRAVMLGELMRLKKGIAIAGTHGKTTTT 120 Query: 183 SLVASVLAQGGLDPTFVIGGRLTSAGANAKLGTGEFIVAEADESDASFLNLTPVIEVITN 242 SLVASVLAQGGLDPTFVIGGRLTSAGANAKLGTGEFIVAEADESDASFLNLTPVIEVITN Sbjct: 121 SLVASVLAQGGLDPTFVIGGRLTSAGANAKLGTGEFIVAEADESDASFLNLTPVIEVITN 180 Query: 243 IDADHMETYNHDFARLKQAFVEFTQRLPFYGVAVLCLDDPHVREIMPMVSKPILTYGFHE 302 IDADHMETYNHDFARLKQAFVEFTQRLPFYGVAVLCLDDPHVREIMPMVSKPILTYGFHE Sbjct: 181 IDADHMETYNHDFARLKQAFVEFTQRLPFYGVAVLCLDDPHVREIMPMVSKPILTYGFHE 240 Query: 303 DADVRAIDAKAVDGKMEFTVIQDGYAPMQVSLNQPGMHNVQNACAAIAIARELDVDDAAT 362 DADVRAIDAKAVDGKMEFTVIQDGYAPMQVSLNQPGMHNVQNACAAIAIARELDVDDAAT Sbjct: 241 DADVRAIDAKAVDGKMEFTVIQDGYAPMQVSLNQPGMHNVQNACAAIAIARELDVDDAAT 300 Query: 363 QKALTEFNGVGRRFTRYGEVPITDAQGNPAGHFTLVDDYGHHPVETAATIAAARGAYPGR 422 QKALTEFNGVGRRFTRYGEVP+ DA+G PAGHFTLVDDYGHHPVETAATIAAARGAYPGR Sbjct: 301 QKALTEFNGVGRRFTRYGEVPLWDAEGKPAGHFTLVDDYGHHPVETAATIAAARGAYPGR 360 Query: 423 RLVLAFQPHRYTRTRDLFEDFVKVLSSPDVLVLGEVYSAGEAPIVAADGRSLAHALRAAG 482 RLVLAFQPHRYTRTRDLFEDFVKVLSSPDVLVL EVYSAGEAPIVAADGRSLAHALRAAG Sbjct: 361 RLVLAFQPHRYTRTRDLFEDFVKVLSSPDVLVLAEVYSAGEAPIVAADGRSLAHALRAAG 420 Query: 483 KVEPVFVDDIGDMPETIRNVVRDGDVVMTMGAGSISAVPGRLVAQAGGKNEQGAA 537 KVEPVFVDDIGDMPETIRNVVRDGDVVMTMGAGSISAVPGRL AQA KNEQGAA Sbjct: 421 KVEPVFVDDIGDMPETIRNVVRDGDVVMTMGAGSISAVPGRLTAQADVKNEQGAA 475 >ref|YP_001101045.1| UDP-N-acetylmuramate--L-alanine ligase [Herminiimonas arsenicoxydans] sp|A4G8T7|MURC_HERAR RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName: Full=UDP-N-acetylmuramoyl-L-alanine synthetase emb|CAL62924.1| UDP-N-acetylmuramate--L-alanine ligase (UDP-N-acetylmuramoyl-L-alanine synthetase) [Herminiimonas arsenicoxydans] Length = 469 Score = 731 bits (1887), Expect = 0.0, Method: Composition-based stats. Identities = 388/462 (83%), Positives = 418/462 (90%) Query: 63 MKHRVKNIHFVGIGGSGMSGIAEVLLNLGYGVSGSDLGSNAATQRLAQLGASIRYGHAAE 122 MKH+VKNIHFVGIGGSGMSGIAEVLLNLGY +SGSDLGSNAAT+RL +LGA + GHAAE Sbjct: 1 MKHKVKNIHFVGIGGSGMSGIAEVLLNLGYTISGSDLGSNAATRRLVELGAKVTLGHAAE 60 Query: 123 NIEGADAIVTSTAVKGDNPEVLAARKKHIPIVPRAVMLGELMRLKKGIAIAGTHGKTTTT 182 NI ADAIVTSTAV+ DNPEV+AAR+KHIPIVPRA+ML ELMRL++GIAIAGTHGKTTTT Sbjct: 61 NIASADAIVTSTAVQQDNPEVVAAREKHIPIVPRAMMLAELMRLRRGIAIAGTHGKTTTT 120 Query: 183 SLVASVLAQGGLDPTFVIGGRLTSAGANAKLGTGEFIVAEADESDASFLNLTPVIEVITN 242 SLVASVLA+GGLDPTFVIGG L SAGANAKLG GEFIVAEADESDASFLNL+PVIEVITN Sbjct: 121 SLVASVLAEGGLDPTFVIGGLLNSAGANAKLGAGEFIVAEADESDASFLNLSPVIEVITN 180 Query: 243 IDADHMETYNHDFARLKQAFVEFTQRLPFYGVAVLCLDDPHVREIMPMVSKPILTYGFHE 302 IDADHMETY HDF +LKQAFVEFTQRLPFYGVAVLCLDD VREIMP +SK I TYGFHE Sbjct: 181 IDADHMETYEHDFEKLKQAFVEFTQRLPFYGVAVLCLDDATVREIMPRISKLITTYGFHE 240 Query: 303 DADVRAIDAKAVDGKMEFTVIQDGYAPMQVSLNQPGMHNVQNACAAIAIARELDVDDAAT 362 DA VRA+DAKAVDG M+FTVIQDGYAPMQVSLNQPGMHNVQNACAAIAIAREL V D AT Sbjct: 241 DAMVRAVDAKAVDGHMQFTVIQDGYAPMQVSLNQPGMHNVQNACAAIAIARELGVSDHAT 300 Query: 363 QKALTEFNGVGRRFTRYGEVPITDAQGNPAGHFTLVDDYGHHPVETAATIAAARGAYPGR 422 QKALTEF GVGRRFTRYGE+ + PAG F LVDDYGHHPVETAATI+AARGAYPGR Sbjct: 301 QKALTEFTGVGRRFTRYGEISFSAVNDKPAGSFALVDDYGHHPVETAATISAARGAYPGR 360 Query: 423 RLVLAFQPHRYTRTRDLFEDFVKVLSSPDVLVLGEVYSAGEAPIVAADGRSLAHALRAAG 482 RLVLAFQPHRYTRTRDLFEDFVKVLS+ D+L+L EVY+AGE PIVAADGR+LAHALR AG Sbjct: 361 RLVLAFQPHRYTRTRDLFEDFVKVLSTTDMLLLAEVYAAGEQPIVAADGRTLAHALRVAG 420 Query: 483 KVEPVFVDDIGDMPETIRNVVRDGDVVMTMGAGSISAVPGRL 524 KV+PVFV+ I DMP TI N+VRDGDVV+TMGAGSIS VP +L Sbjct: 421 KVDPVFVEHIVDMPATIMNIVRDGDVVITMGAGSISGVPAKL 462 >ref|ZP_08272729.1| UDP-N-acetylmuramate-alanine ligase [Oxalobacteraceae bacterium IMCC9480] gb|EGF33800.1| UDP-N-acetylmuramate-alanine ligase [Oxalobacteraceae bacterium IMCC9480] Length = 471 Score = 723 bits (1865), Expect = 0.0, Method: Composition-based stats. Identities = 382/462 (82%), Positives = 417/462 (90%) Query: 63 MKHRVKNIHFVGIGGSGMSGIAEVLLNLGYGVSGSDLGSNAATQRLAQLGASIRYGHAAE 122 MKH+VK+IHFVGIGGSGMSGIAEVLLNLGY +SGSDLGSNAAT+RL+ LGA + GHAA Sbjct: 1 MKHKVKHIHFVGIGGSGMSGIAEVLLNLGYTISGSDLGSNAATKRLSDLGACVMLGHAAA 60 Query: 123 NIEGADAIVTSTAVKGDNPEVLAARKKHIPIVPRAVMLGELMRLKKGIAIAGTHGKTTTT 182 I+GADAIVTSTAVK DNPEV+A R++HIPIVPRA+ML ELMRLK+GIAIAGTHGKTTTT Sbjct: 61 YIDGADAIVTSTAVKEDNPEVVAGRERHIPIVPRALMLAELMRLKRGIAIAGTHGKTTTT 120 Query: 183 SLVASVLAQGGLDPTFVIGGRLTSAGANAKLGTGEFIVAEADESDASFLNLTPVIEVITN 242 SLVASVLAQGGLDPTFVIGGRLTSAGANAKLG G+FIVAEADESDASFLNL+PVIEVITN Sbjct: 121 SLVASVLAQGGLDPTFVIGGRLTSAGANAKLGAGDFIVAEADESDASFLNLSPVIEVITN 180 Query: 243 IDADHMETYNHDFARLKQAFVEFTQRLPFYGVAVLCLDDPHVREIMPMVSKPILTYGFHE 302 IDADHMETY HDF +LKQAFV+FT RLPFYG+AVLCLDD HVREIMP ++KPI+TYGFHE Sbjct: 181 IDADHMETYEHDFNKLKQAFVDFTLRLPFYGIAVLCLDDVHVREIMPRIAKPIMTYGFHE 240 Query: 303 DADVRAIDAKAVDGKMEFTVIQDGYAPMQVSLNQPGMHNVQNACAAIAIARELDVDDAAT 362 +ADVRAIDA+AV G M+FTVIQDGY P+ +SLNQPGMHNVQNACAAIAIAREL V D T Sbjct: 241 EADVRAIDARAVGGLMQFTVIQDGYPPLPISLNQPGMHNVQNACAAIAIARELSVADCDT 300 Query: 363 QKALTEFNGVGRRFTRYGEVPITDAQGNPAGHFTLVDDYGHHPVETAATIAAARGAYPGR 422 QKAL EFNGVGRRFTRYGE+ G P G F LVDDYGHHPVETAAT++AARGAYPGR Sbjct: 301 QKALAEFNGVGRRFTRYGEIAFAGRDGKPGGTFALVDDYGHHPVETAATLSAARGAYPGR 360 Query: 423 RLVLAFQPHRYTRTRDLFEDFVKVLSSPDVLVLGEVYSAGEAPIVAADGRSLAHALRAAG 482 RLVLAFQPHRYTRTRDLFEDFVKVLSS D LVL EVY+AGE PIVAADGR+LAHALR AG Sbjct: 361 RLVLAFQPHRYTRTRDLFEDFVKVLSSTDALVLAEVYAAGEQPIVAADGRALAHALRVAG 420 Query: 483 KVEPVFVDDIGDMPETIRNVVRDGDVVMTMGAGSISAVPGRL 524 KVEPVFV+ I DMPETI N++RDGDVV+TMGAGSIS VP +L Sbjct: 421 KVEPVFVEVIADMPETIMNMLRDGDVVITMGAGSISGVPAKL 462 >ref|YP_001354704.1| UDP-N-acetylmuramate--L-alanine ligase [Janthinobacterium sp. Marseille] sp|A6T2F7|MURC_JANMA RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; AltName: Full=UDP-N-acetylmuramoyl-L-alanine synthetase gb|ABR88673.1| UDP-N-acetylmuramate--alanine ligase [Janthinobacterium sp. Marseille] Length = 465 Score = 722 bits (1863), Expect = 0.0, Method: Composition-based stats. Identities = 391/463 (84%), Positives = 421/463 (90%) Query: 63 MKHRVKNIHFVGIGGSGMSGIAEVLLNLGYGVSGSDLGSNAATQRLAQLGASIRYGHAAE 122 MKH+VKNIHFVGIGGSGMSGIAEVLLNLGY VSGSDLGSNAAT+RL +LGA + GHAAE Sbjct: 1 MKHKVKNIHFVGIGGSGMSGIAEVLLNLGYTVSGSDLGSNAATRRLIELGAKVTLGHAAE 60 Query: 123 NIEGADAIVTSTAVKGDNPEVLAARKKHIPIVPRAVMLGELMRLKKGIAIAGTHGKTTTT 182 NIE ADAIVTSTAVK DNPEV+AAR+KHIPIVPRAVML ELMRL++GIAIAGTHGKTTTT Sbjct: 61 NIEKADAIVTSTAVKEDNPEVIAAREKHIPIVPRAVMLAELMRLRRGIAIAGTHGKTTTT 120 Query: 183 SLVASVLAQGGLDPTFVIGGRLTSAGANAKLGTGEFIVAEADESDASFLNLTPVIEVITN 242 SLVASVLA+GGLDPTFVIGG L SAGANAKLGTGEFIVAEADESDASFLNL+PVIEVITN Sbjct: 121 SLVASVLAEGGLDPTFVIGGLLNSAGANAKLGTGEFIVAEADESDASFLNLSPVIEVITN 180 Query: 243 IDADHMETYNHDFARLKQAFVEFTQRLPFYGVAVLCLDDPHVREIMPMVSKPILTYGFHE 302 IDADHMETY HDF +LKQAF+EFTQRLPFYGVAVLC+DD VREIMP +SK I TYGFHE Sbjct: 181 IDADHMETYGHDFEKLKQAFIEFTQRLPFYGVAVLCIDDATVREIMPRISKLITTYGFHE 240 Query: 303 DADVRAIDAKAVDGKMEFTVIQDGYAPMQVSLNQPGMHNVQNACAAIAIARELDVDDAAT 362 DA VRAIDAKA+DG M FTV+Q+GYAPMQVSLNQPGMHNVQNACAAIAIAREL V D AT Sbjct: 241 DAQVRAIDAKAIDGHMHFTVLQEGYAPMQVSLNQPGMHNVQNACAAIAIARELGVADHAT 300 Query: 363 QKALTEFNGVGRRFTRYGEVPITDAQGNPAGHFTLVDDYGHHPVETAATIAAARGAYPGR 422 QKALTEFNGVGRRFTRYGE+ + PAG F LVDDYGHHPVETAATIAAARGAYPGR Sbjct: 301 QKALTEFNGVGRRFTRYGEISLPAVNDKPAGTFALVDDYGHHPVETAATIAAARGAYPGR 360 Query: 423 RLVLAFQPHRYTRTRDLFEDFVKVLSSPDVLVLGEVYSAGEAPIVAADGRSLAHALRAAG 482 RLVLAFQPHRYTRTRDLFEDFVKVLS+ D+LVL EVY+AGE PIVAADGR+LAHALR AG Sbjct: 361 RLVLAFQPHRYTRTRDLFEDFVKVLSTTDMLVLAEVYAAGEQPIVAADGRTLAHALRVAG 420 Query: 483 KVEPVFVDDIGDMPETIRNVVRDGDVVMTMGAGSISAVPGRLV 525 KV+PVFV+ I DMP TI N+++DGDVV+TMGAGSIS VP +LV Sbjct: 421 KVDPVFVEKIADMPATIMNIIKDGDVVITMGAGSISGVPAKLV 463 >ref|YP_004754587.1| UDP-N-acetylmuramate--alanine ligase [Collimonas fungivorans Ter331] gb|AEK63764.1| UDP-N-acetylmuramate--alanine ligase [Collimonas fungivorans Ter331] Length = 468 Score = 720 bits (1858), Expect = 0.0, Method: Composition-based stats. Identities = 386/462 (83%), Positives = 419/462 (90%) Query: 63 MKHRVKNIHFVGIGGSGMSGIAEVLLNLGYGVSGSDLGSNAATQRLAQLGASIRYGHAAE 122 MKH+VKNIHFVGIGGSGMSGIAEVLLNLGY +SGSDLG NAAT+RLA LGA + GHAA Sbjct: 1 MKHKVKNIHFVGIGGSGMSGIAEVLLNLGYTISGSDLGDNAATRRLAGLGAKVSRGHAAA 60 Query: 123 NIEGADAIVTSTAVKGDNPEVLAARKKHIPIVPRAVMLGELMRLKKGIAIAGTHGKTTTT 182 NI+ A AIVTSTAV+ DNPEV+AAR+KHIPIVPRAVML ELMRLK+GIAIAGTHGKTTTT Sbjct: 61 NIDQAHAIVTSTAVQADNPEVVAAREKHIPIVPRAVMLAELMRLKRGIAIAGTHGKTTTT 120 Query: 183 SLVASVLAQGGLDPTFVIGGRLTSAGANAKLGTGEFIVAEADESDASFLNLTPVIEVITN 242 SLVASVLAQGGLDPTFVIGGRLTSAGANAKLG+G+FIVAEADESDASFLNL+PVIEVITN Sbjct: 121 SLVASVLAQGGLDPTFVIGGRLTSAGANAKLGSGDFIVAEADESDASFLNLSPVIEVITN 180 Query: 243 IDADHMETYNHDFARLKQAFVEFTQRLPFYGVAVLCLDDPHVREIMPMVSKPILTYGFHE 302 IDADHM+TY+HDF +LKQAFVEFTQRLPFYGVAVLC+DD +VREIMP +SK I TYGFH Sbjct: 181 IDADHMDTYDHDFGKLKQAFVEFTQRLPFYGVAVLCMDDANVREIMPQISKLITTYGFHA 240 Query: 303 DADVRAIDAKAVDGKMEFTVIQDGYAPMQVSLNQPGMHNVQNACAAIAIARELDVDDAAT 362 DADVRAIDAKAV G M+FTVIQ GYA M +SLNQPGMHNVQNACAAIAIAREL V DAA Sbjct: 241 DADVRAIDAKAVAGHMQFTVIQKGYAAMPISLNQPGMHNVQNACAAIAIARELGVADAAI 300 Query: 363 QKALTEFNGVGRRFTRYGEVPITDAQGNPAGHFTLVDDYGHHPVETAATIAAARGAYPGR 422 Q+ALTEFNGVGRRFTRYGE+ + DA G P G F LVDDYGHHPVETAATI+AARGAYPGR Sbjct: 301 QQALTEFNGVGRRFTRYGEIKLQDAAGKPNGEFALVDDYGHHPVETAATISAARGAYPGR 360 Query: 423 RLVLAFQPHRYTRTRDLFEDFVKVLSSPDVLVLGEVYSAGEAPIVAADGRSLAHALRAAG 482 RLVL FQPHRYTRTRDLFEDFVKVLS+ DVLVL EVY+AGEAPI+AADGR+LAHALR AG Sbjct: 361 RLVLVFQPHRYTRTRDLFEDFVKVLSTVDVLVLAEVYAAGEAPIIAADGRALAHALRVAG 420 Query: 483 KVEPVFVDDIGDMPETIRNVVRDGDVVMTMGAGSISAVPGRL 524 E VFV+DI DMP ++ N+VRDGDVVMTMGAGSIS VPG+L Sbjct: 421 MAELVFVEDINDMPASVLNLVRDGDVVMTMGAGSISGVPGKL 462