BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0139.p (325 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773784.1| ATPase AAA [Herbaspirillum seropedicae SmR1]... 572 e-161 ref|YP_004754575.1| putative ATP/GTP-binding protein [Collimonas... 479 e-133 ref|YP_001354693.1| hypothetical protein mma_3003 [Janthinobacte... 474 e-132 ref|YP_001101033.1| hypothetical protein HEAR2796 [Herminiimonas... 470 e-130 ref|YP_003908285.1| hypothetical protein BC1003_3045 [Burkholder... 444 e-123 >ref|YP_003773784.1| ATPase AAA [Herbaspirillum seropedicae SmR1] gb|ADJ61876.1| AAA+ superfamily ATPase protein [Herbaspirillum seropedicae SmR1] Length = 291 Score = 572 bits (1473), Expect = e-161, Method: Composition-based stats. Identities = 285/290 (98%), Positives = 288/290 (99%) Query: 35 MTQLDQFLQRAEALLARVEAILPNAAAREPDWNAAVAFRWRGATAQRPGYLQAVGQISKI 94 MTQLDQFLQRAEALLARVEAILP AAAREPDWNAAVAFRWRGATAQRPGYLQAVG IS+I Sbjct: 1 MTQLDQFLQRAEALLARVEAILPQAAAREPDWNAAVAFRWRGATAQRPGYLQAVGHISQI 60 Query: 95 GLSDLHNIGPQKEQIDQNTRQFVEGRPANNVLLTGARGTGKSSLIKACLNQYADRGLRLI 154 GLSDLHNIGPQKEQIDQNTRQFVEGRPANNVLLTGARGTGKSSLIKACLNQYADRGLRLI Sbjct: 61 GLSDLHNIGPQKEQIDQNTRQFVEGRPANNVLLTGARGTGKSSLIKACLNQYADRGLRLI 120 Query: 155 EVDKDDLHDLQDIVELVAARPERFIVFCDDLSFEEGEGGYKALKVALDGSIAAQSDNVLI 214 EVDKDDLHDLQDIVELVAARPERFIVFCDDLSFEEGEGGYKALKVALDGSIAAQSDNVLI Sbjct: 121 EVDKDDLHDLQDIVELVAARPERFIVFCDDLSFEEGEGGYKALKVALDGSIAAQSDNVLI 180 Query: 215 YATSNRRHLMPERLSDNNTYTHTEDGDLHPGETVEEKISLSERFGLWVTFYPFKQDDFLD 274 YATSNRRHLMPERLSDN+TYTHTEDGDLHPGETVEEKISLSERFGLWVTFYPFKQDDFL+ Sbjct: 181 YATSNRRHLMPERLSDNSTYTHTEDGDLHPGETVEEKISLSERFGLWVTFYPFKQDDFLE 240 Query: 275 IVAHWLRHFGCNDAQIAEARADALRWALQRSSRSGRVAWQFARDYAGKAQ 324 IVAHWLRHFGCNDAQIAEARADALRWALQRSSRSGRVAWQFARDYAGKAQ Sbjct: 241 IVAHWLRHFGCNDAQIAEARADALRWALQRSSRSGRVAWQFARDYAGKAQ 290 >ref|YP_004754575.1| putative ATP/GTP-binding protein [Collimonas fungivorans Ter331] gb|AEK63752.1| putative ATP/GTP-binding protein [Collimonas fungivorans Ter331] Length = 305 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 240/288 (83%), Positives = 254/288 (88%), Gaps = 1/288 (0%) Query: 35 MTQLDQFLQRAEALLARVEAILPNAAAREPDWNAAVAFRWRGATAQRPGYLQAVGQISKI 94 MTQLDQFL RAEALL R+E+ILP A A PDW AA AFRWR GYLQAVG IS I Sbjct: 15 MTQLDQFLLRAEALLTRLESILPQAKA-APDWQAATAFRWRHRGGSAGGYLQAVGHISDI 73 Query: 95 GLSDLHNIGPQKEQIDQNTRQFVEGRPANNVLLTGARGTGKSSLIKACLNQYADRGLRLI 154 LSDLHNI QK+QIDQNTRQFV+GRPANNVLLTGARGTGKSSLIKACLNQYA +GLRLI Sbjct: 74 ALSDLHNIEVQKQQIDQNTRQFVDGRPANNVLLTGARGTGKSSLIKACLNQYAPQGLRLI 133 Query: 155 EVDKDDLHDLQDIVELVAARPERFIVFCDDLSFEEGEGGYKALKVALDGSIAAQSDNVLI 214 EVDKDDL L DIV+LVA RPERFI+FCDDLSFEEGE GYKALKVALDGSIAAQSDNVLI Sbjct: 134 EVDKDDLAALPDIVDLVAERPERFIIFCDDLSFEEGESGYKALKVALDGSIAAQSDNVLI 193 Query: 215 YATSNRRHLMPERLSDNNTYTHTEDGDLHPGETVEEKISLSERFGLWVTFYPFKQDDFLD 274 YATSNRRHL+PER+SDN +Y TEDGDLHPGETVEEKISLSERFGLWV+FYPFKQDD+LD Sbjct: 194 YATSNRRHLLPERMSDNASYKTTEDGDLHPGETVEEKISLSERFGLWVSFYPFKQDDYLD 253 Query: 275 IVAHWLRHFGCNDAQIAEARADALRWALQRSSRSGRVAWQFARDYAGK 322 IV HWL HFGCN QIAEAR DALRWALQR+SRSGRVAWQFARDYAG+ Sbjct: 254 IVGHWLSHFGCNAEQIAEARGDALRWALQRASRSGRVAWQFARDYAGR 301 >ref|YP_001354693.1| hypothetical protein mma_3003 [Janthinobacterium sp. Marseille] gb|ABR89734.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 291 Score = 474 bits (1221), Expect = e-132, Method: Composition-based stats. Identities = 231/289 (79%), Positives = 257/289 (88%), Gaps = 2/289 (0%) Query: 35 MTQLDQFLQRAEALLARVEAILPNAAAREPDWNAAVAFRWRGATAQR-PGYLQAVGQISK 93 MTQLDQFL RAEALL R+E+ILP A PDWNA +AFRWR ++ + GYLQ V +S Sbjct: 1 MTQLDQFLIRAEALLERLESILPPAVP-TPDWNAGIAFRWRKSSGKNGRGYLQPVAHLSP 59 Query: 94 IGLSDLHNIGPQKEQIDQNTRQFVEGRPANNVLLTGARGTGKSSLIKACLNQYADRGLRL 153 I L+DLHNIGPQK+QI+QNTRQFVEG PANNVLLTGARGTGKSSLIKACLNQ+AD+GLRL Sbjct: 60 IALTDLHNIGPQKQQIEQNTRQFVEGVPANNVLLTGARGTGKSSLIKACLNQFADQGLRL 119 Query: 154 IEVDKDDLHDLQDIVELVAARPERFIVFCDDLSFEEGEGGYKALKVALDGSIAAQSDNVL 213 IEVDKDDL DL DIV+LVA RPERFI+FCDDLSFEEGEGGYKALKVALDGSI+AQSDNVL Sbjct: 120 IEVDKDDLGDLADIVDLVAGRPERFIIFCDDLSFEEGEGGYKALKVALDGSISAQSDNVL 179 Query: 214 IYATSNRRHLMPERLSDNNTYTHTEDGDLHPGETVEEKISLSERFGLWVTFYPFKQDDFL 273 IYATSNRRHL+PER+SDN Y ++GDLHPGETVEEKISLSERFGLWVTFYPF+QDD+L Sbjct: 180 IYATSNRRHLLPERMSDNAGYKTDDNGDLHPGETVEEKISLSERFGLWVTFYPFRQDDYL 239 Query: 274 DIVAHWLRHFGCNDAQIAEARADALRWALQRSSRSGRVAWQFARDYAGK 322 DIVAHWL+HFGCN QI EAR +AL+WALQR SRSGRVAWQFA+D+AGK Sbjct: 240 DIVAHWLKHFGCNPQQIEEARTEALQWALQRGSRSGRVAWQFAKDHAGK 288 >ref|YP_001101033.1| hypothetical protein HEAR2796 [Herminiimonas arsenicoxydans] emb|CAL62912.1| Conserved hypothetical protein; putative ATPase of the AAA+ class [Herminiimonas arsenicoxydans] Length = 310 Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats. Identities = 232/291 (79%), Positives = 257/291 (88%), Gaps = 2/291 (0%) Query: 35 MTQLDQFLQRAEALLARVEAILPNAAAREPDWNAAVAFRWRGATAQR-PGYLQAVGQISK 93 MTQL+QFL RAEALL R+EAILP A A P+W+A +AFRWR + + GYLQ V IS Sbjct: 20 MTQLEQFLTRAEALLGRLEAILPPAHA-VPNWDAGIAFRWRKPSGKDGRGYLQPVAHISP 78 Query: 94 IGLSDLHNIGPQKEQIDQNTRQFVEGRPANNVLLTGARGTGKSSLIKACLNQYADRGLRL 153 I LSDLHNIG QK+QI+QNTRQFVEG PANNVLLTGARGTGKSSLIKACLNQYAD+GLRL Sbjct: 79 IALSDLHNIGTQKQQIEQNTRQFVEGLPANNVLLTGARGTGKSSLIKACLNQYADQGLRL 138 Query: 154 IEVDKDDLHDLQDIVELVAARPERFIVFCDDLSFEEGEGGYKALKVALDGSIAAQSDNVL 213 IEVDK+DL DL DIV+LVA RPERFI+FCDDLSFEEGEGGYKALKVALDGSI+AQSDNVL Sbjct: 139 IEVDKNDLGDLADIVDLVAGRPERFIIFCDDLSFEEGEGGYKALKVALDGSISAQSDNVL 198 Query: 214 IYATSNRRHLMPERLSDNNTYTHTEDGDLHPGETVEEKISLSERFGLWVTFYPFKQDDFL 273 IYATSNRRHL+PER+SDN +Y ++GDLHPGETVEEKISLSERFGLWVTFYPF+QDD+L Sbjct: 199 IYATSNRRHLLPERMSDNASYKTDDNGDLHPGETVEEKISLSERFGLWVTFYPFRQDDYL 258 Query: 274 DIVAHWLRHFGCNDAQIAEARADALRWALQRSSRSGRVAWQFARDYAGKAQ 324 DIVAHWL HFGCN QI AR +AL+WALQR SRSGRVAWQFA+D+AGKAQ Sbjct: 259 DIVAHWLTHFGCNAQQIEAARTEALQWALQRGSRSGRVAWQFAKDHAGKAQ 309 >ref|YP_003908285.1| hypothetical protein BC1003_3045 [Burkholderia sp. CCGE1003] gb|ADN58994.1| protein of unknown function DUF815 [Burkholderia sp. CCGE1003] Length = 289 Score = 444 bits (1142), Expect = e-123, Method: Composition-based stats. Identities = 221/288 (76%), Positives = 245/288 (85%), Gaps = 3/288 (1%) Query: 35 MTQLDQFLQRAEALLARVEAILPNAAAREPDWNAAVAFRWRGATAQRPGYLQAVGQISKI 94 M +L+QFL RAEA+L R+EA+LP AA E DW+AAVAFRWR Q GYLQAV IS I Sbjct: 1 MDKLEQFLTRAEAVLVRLEAMLPPAAP-EIDWSAAVAFRWR--KRQGRGYLQAVPAISTI 57 Query: 95 GLSDLHNIGPQKEQIDQNTRQFVEGRPANNVLLTGARGTGKSSLIKACLNQYADRGLRLI 154 L DL NI QK I+QNTRQFV PANNVLLTGARGTGKSSLIKACLN YA GLRLI Sbjct: 58 TLDDLQNIDRQKALIEQNTRQFVHKLPANNVLLTGARGTGKSSLIKACLNAYAKDGLRLI 117 Query: 155 EVDKDDLHDLQDIVELVAARPERFIVFCDDLSFEEGEGGYKALKVALDGSIAAQSDNVLI 214 EVDKDDLHDL DIVEL+A RPERF+VFCDDLSFE+GE GYKALKVALDGS+AAQSDNVLI Sbjct: 118 EVDKDDLHDLGDIVELIAQRPERFVVFCDDLSFEDGESGYKALKVALDGSVAAQSDNVLI 177 Query: 215 YATSNRRHLMPERLSDNNTYTHTEDGDLHPGETVEEKISLSERFGLWVTFYPFKQDDFLD 274 YATSNRRHL+PE +SDN TY HT DG++HPGE VEEKISLSERFGLWV+FYPFKQDD+L Sbjct: 178 YATSNRRHLLPEYMSDNETYKHTSDGEIHPGELVEEKISLSERFGLWVSFYPFKQDDYLS 237 Query: 275 IVAHWLRHFGCNDAQIAEARADALRWALQRSSRSGRVAWQFARDYAGK 322 I+AHWLRHFGCNDA++ AR DAL WAL+R SRSGRVAWQFARD++G+ Sbjct: 238 IIAHWLRHFGCNDAEVEAARGDALVWALERGSRSGRVAWQFARDWSGR 285