BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0137.p         (61 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773786.1| hypothetical protein Hsero_0352 [Herbaspiril...   113   7e-24
ref|YP_001101031.1| hypothetical protein HEAR2794 [Herminiimonas...    88   6e-16
ref|YP_004754573.1| Zinc-binding protein yacG [Collimonas fungiv...    87   7e-16
ref|YP_001354691.1| hypothetical protein mma_3001 [Janthinobacte...    82   2e-14
ref|ZP_08275776.1| zinc-binding protein [Oxalobacteraceae bacter...    79   2e-13

>ref|YP_003773786.1| hypothetical protein Hsero_0352 [Herbaspirillum seropedicae SmR1]
 gb|ADJ61878.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 61

 Score =  113 bits (283), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 58/61 (95%), Positives = 60/61 (98%)

Query: 1  MATIVDCPTCGTKVEWSEKNKYRPFCSERCKQIDLGAWAEEKYTIPAVNLPLEDEGDKPV 60
          MATIVDCPTCG KVEWSEKNK+RPFCSERCKQIDLGAWAEEKYTIPAVNLPL+DEGDKPV
Sbjct: 1  MATIVDCPTCGAKVEWSEKNKFRPFCSERCKQIDLGAWAEEKYTIPAVNLPLDDEGDKPV 60

Query: 61 Q 61
          Q
Sbjct: 61 Q 61


>ref|YP_001101031.1| hypothetical protein HEAR2794 [Herminiimonas arsenicoxydans]
 emb|CAL62910.1| conserved hypothetical protein; putative glucocorticoid receptor
          domain [Herminiimonas arsenicoxydans]
          Length = 66

 Score = 87.8 bits (216), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 44/54 (81%), Positives = 47/54 (87%), Gaps = 1/54 (1%)

Query: 1  MATIVDCPTCGTKVEWSEKNKYRPFCSERCKQIDLGAWAEEKYTIPAVNLPLED 54
          M TIVDCPTCGTKVEWSE +K+RPFCS RCKQIDLGAWAEEKY IP  N PL+D
Sbjct: 1  MVTIVDCPTCGTKVEWSETSKFRPFCSNRCKQIDLGAWAEEKYVIPVAN-PLDD 53


>ref|YP_004754573.1| Zinc-binding protein yacG [Collimonas fungivorans Ter331]
 gb|AEK63750.1| Zinc-binding UPF0243 protein yacG [Collimonas fungivorans Ter331]
          Length = 62

 Score = 87.0 bits (214), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 45/61 (73%), Positives = 50/61 (81%), Gaps = 2/61 (3%)

Query: 1  MATIVDCPTCGTKVEWSEKNKYRPFCSERCKQIDLGAWAEEKYTIPAVNLP--LEDEGDK 58
          M T VDCPTCGTKVEW   N++RPFCSERCKQIDLGAWAEEKY IPAVN P  ++D+G  
Sbjct: 1  MTTTVDCPTCGTKVEWIAANRFRPFCSERCKQIDLGAWAEEKYAIPAVNPPDEIDDDGKL 60

Query: 59 P 59
          P
Sbjct: 61 P 61


>ref|YP_001354691.1| hypothetical protein mma_3001 [Janthinobacterium sp. Marseille]
 gb|ABR91789.1| Uncharacterized conserved protein [Janthinobacterium sp.
          Marseille]
          Length = 64

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/49 (79%), Positives = 43/49 (87%)

Query: 1  MATIVDCPTCGTKVEWSEKNKYRPFCSERCKQIDLGAWAEEKYTIPAVN 49
          M T V+CPTCGTKVEW+E +K+RPFCS RCKQIDLGAWAEEKY IP VN
Sbjct: 1  MVTTVNCPTCGTKVEWTELSKFRPFCSNRCKQIDLGAWAEEKYVIPVVN 49


>ref|ZP_08275776.1| zinc-binding protein [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF30759.1| zinc-binding protein [Oxalobacteraceae bacterium IMCC9480]
          Length = 60

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/43 (90%), Positives = 41/43 (95%)

Query: 5  VDCPTCGTKVEWSEKNKYRPFCSERCKQIDLGAWAEEKYTIPA 47
          +DCPTCGTKVEWSE +KYRPFCSERCKQIDLGAWAEEKYTIP 
Sbjct: 1  MDCPTCGTKVEWSEASKYRPFCSERCKQIDLGAWAEEKYTIPG 43