BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0134.p (287 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773789.1| bifunctional leader peptidase/N-methyltransf... 328 6e-88 ref|ZP_08275773.1| Leader peptidase (Prepilin peptidase) [Oxalob... 283 2e-74 ref|YP_002006703.1| type IV prepilin peptidase [Cupriavidus taiw... 253 2e-65 ref|YP_001354688.1| leader peptidase (prepilin peptidase) / N-me... 252 4e-65 ref|YP_001101028.1| type 4 prepilin-like proteins leader peptide... 252 4e-65 >ref|YP_003773789.1| bifunctional leader peptidase/N-methyltransferase transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ61881.1| bifunctional enzyme: leader peptidase/N-methyltransferase transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 287 Score = 328 bits (841), Expect = 6e-88, Method: Composition-based stats. Identities = 214/287 (74%), Positives = 243/287 (84%) Query: 1 MSFLDALAFPGNAALAGAAALLGLLVGSFLNVVIHRVPLMMLRETANFVAQERGEALPHA 60 M FL+A A PG+ L AALLGLLVGSFLNV+IHR+P+MMLRE+ANFVAQERGE PH Sbjct: 1 MPFLEAYALPGDPILCALAALLGLLVGSFLNVLIHRLPIMMLRESANFVAQERGETPPHQ 60 Query: 61 DRYNLWLPASACPHCAAPLALHHKIPVLSWLLLRGRCAFCANPISARYPLVELLTAMLFA 120 DRY+LWLP+SACPHCA PL HK+PVLSWLLLRGRC C I RYPLVELLTA LFA Sbjct: 61 DRYDLWLPSSACPHCATPLPWRHKLPVLSWLLLRGRCGHCQAAIGLRYPLVELLTAALFA 120 Query: 121 LLGWRFGLGLHGVALMVCASFLIALAVIDARTMLLPDDLTLPLMWLGMLVNVVHRLVPLQ 180 WRFGLG+ G+A+M C + L+ALA IDA+TMLLPDDLTLPLMWLG+LVN+ HRLVPLQ Sbjct: 121 FAAWRFGLGVTGLAVMACTATLVALAFIDAQTMLLPDDLTLPLMWLGLLVNLTHRLVPLQ 180 Query: 181 DAVLGAMAGYGVLWLIYWIFKLATGKEGLGYGDFKLMAALGAWLGWQALPLVLLLASALG 240 DAVLGA AGYGVLWLI+W+FKL TGK+GLGYGDFKLMAALGAWLGWQALP++LLLASA+G Sbjct: 181 DAVLGAAAGYGVLWLIFWLFKLITGKDGLGYGDFKLMAALGAWLGWQALPVILLLASAMG 240 Query: 241 AVLGLALMGLGRHQRGQAIAFGPCLATAGMLTLLMGHGWLTQLLYDF 287 AVLG+ LM GRH+RGQAI FGPCLA+AG+L LL G WL + LYD+ Sbjct: 241 AVLGVVLMAAGRHRRGQAIPFGPCLASAGLLALLQGLDWLWRGLYDY 287 >ref|ZP_08275773.1| Leader peptidase (Prepilin peptidase) [Oxalobacteraceae bacterium IMCC9480] gb|EGF30756.1| Leader peptidase (Prepilin peptidase) [Oxalobacteraceae bacterium IMCC9480] Length = 288 Score = 283 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 153/257 (59%), Positives = 191/257 (74%) Query: 7 LAFPGNAALAGAAALLGLLVGSFLNVVIHRVPLMMLRETANFVAQERGEALPHADRYNLW 66 LA PGNA A A + GLL+GSFLNVVIHR+P MM RE+ N+VA E G LPH DRYNL Sbjct: 7 LATPGNAPGAAIAGIFGLLIGSFLNVVIHRIPKMMQRESDNYVASESGLPLPHTDRYNLM 66 Query: 67 LPASACPHCAAPLALHHKIPVLSWLLLRGRCAFCANPISARYPLVELLTAMLFALLGWRF 126 LP SACP C ++ IPV+S+L L G+C C PISARYP+VEL TA++ A L W F Sbjct: 67 LPRSACPTCKHAISGIENIPVISYLALGGKCKQCRTPISARYPVVELFTALVSAALVWHF 126 Query: 127 GLGLHGVALMVCASFLIALAVIDARTMLLPDDLTLPLMWLGMLVNVVHRLVPLQDAVLGA 186 G G+ G+A +V A LIA++ IDA T LLPDDLT PL+W+G+L+NV VPL DAV+GA Sbjct: 127 GAGITGLATLVFAWLLIAMSGIDADTQLLPDDLTYPLLWIGLLLNVNATFVPLGDAVIGA 186 Query: 187 MAGYGVLWLIYWIFKLATGKEGLGYGDFKLMAALGAWLGWQALPLVLLLASALGAVLGLA 246 AGY LW +YW+FKL TGKEG+GYGDFKL+AALGAWLGWQ LP+++LL+S +GA++G++ Sbjct: 187 AAGYLCLWSVYWVFKLLTGKEGMGYGDFKLLAALGAWLGWQMLPMIILLSSLVGALVGVS 246 Query: 247 LMGLGRHQRGQAIAFGP 263 L+ G+ R I FGP Sbjct: 247 LIVFGKRGRENPIPFGP 263 >ref|YP_002006703.1| type IV prepilin peptidase [Cupriavidus taiwanensis LMG 19424] emb|CAQ70642.1| TYPE 4 PREPILIN PEPTIDASE BIFUNCTIONNAL: LEADER PEPTIDASE AND N-METHYLTRANSFERASE TRANSMEMBRANE PROTEIN [Cupriavidus taiwanensis LMG 19424] Length = 307 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 153/266 (57%), Positives = 190/266 (71%) Query: 15 LAGAAALLGLLVGSFLNVVIHRVPLMMLRETANFVAQERGEALPHADRYNLWLPASACPH 74 L AA LLGL+VGSFLNVVIHRVP MM R+ AN++A+ RG+ LP+ RYNL +P SACPH Sbjct: 37 LVAAAGLLGLVVGSFLNVVIHRVPRMMERDEANYIAELRGDPLPYPGRYNLMVPRSACPH 96 Query: 75 CAAPLALHHKIPVLSWLLLRGRCAFCANPISARYPLVELLTAMLFALLGWRFGLGLHGVA 134 C +A +PVLS+L LRGRC+ C PIS RYPLVEL +L AL+ WRFG +A Sbjct: 97 CGHAIAPWENVPVLSYLFLRGRCSACKAPISVRYPLVELACGVLSALVAWRFGPTAQALA 156 Query: 135 LMVCASFLIALAVIDARTMLLPDDLTLPLMWLGMLVNVVHRLVPLQDAVLGAMAGYGVLW 194 +V L+AL +IDA T LLPD +TLPL+W+G+L+NV V L DAV+GA AGY VLW Sbjct: 157 ALVLVWGLLALTMIDADTQLLPDQITLPLLWIGLLLNVAGLFVALPDAVIGAAAGYLVLW 216 Query: 195 LIYWIFKLATGKEGLGYGDFKLMAALGAWLGWQALPLVLLLASALGAVLGLALMGLGRHQ 254 + YW+F+L GKEG+G+GDFKLMAALGAW GWQALP ++LL+S G + GLA + L R Sbjct: 217 IAYWLFRLLRGKEGMGFGDFKLMAALGAWFGWQALPALVLLSSVAGVLFGLANIALRRQD 276 Query: 255 RGQAIAFGPCLATAGMLTLLMGHGWL 280 R FGP +A AG++ LL G G L Sbjct: 277 RDTPFPFGPFIALAGVVVLLFGPGVL 302 >ref|YP_001354688.1| leader peptidase (prepilin peptidase) / N-methyltransferase [Janthinobacterium sp. Marseille] gb|ABR88497.1| leader peptidase (prepilin peptidase) / N-methyltransferase [Janthinobacterium sp. Marseille] Length = 286 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 148/266 (55%), Positives = 192/266 (72%) Query: 11 GNAALAGAAALLGLLVGSFLNVVIHRVPLMMLRETANFVAQERGEALPHADRYNLWLPAS 70 G+ A A + GLL+GSFLNVVIHR+P MM RE+ N+VA E G+ LPH DRYNL +P S Sbjct: 10 GSVLPAVLAGIFGLLIGSFLNVVIHRIPKMMQRESDNYVASESGQPLPHEDRYNLIVPRS 69 Query: 71 ACPHCAAPLALHHKIPVLSWLLLRGRCAFCANPISARYPLVELLTAMLFALLGWRFGLGL 130 ACP C ++ IPV+S++ + G+C C PIS RYP++ELL+ +L A L W FG G Sbjct: 70 ACPQCGHQISALQNIPVISYVAIGGKCTACKTPISIRYPIIELLSGLLSAFLIWHFGSGW 129 Query: 131 HGVALMVCASFLIALAVIDARTMLLPDDLTLPLMWLGMLVNVVHRLVPLQDAVLGAMAGY 190 G+ ++ LIAL IDA T LLPDDLTL L+WLG+L+N+ VPL +AV+GA AGY Sbjct: 130 LGLGTLLFTYLLIALTFIDADTQLLPDDLTLSLLWLGLLINLNATFVPLHEAVIGAAAGY 189 Query: 191 GVLWLIYWIFKLATGKEGLGYGDFKLMAALGAWLGWQALPLVLLLASALGAVLGLALMGL 250 LW IYW+FKL TGKEG+GYGDFKL+AALGAWLGW+ LP+++LL+S +GAV+G+AL+ L Sbjct: 190 LSLWSIYWLFKLLTGKEGMGYGDFKLLAALGAWLGWKMLPVIILLSSLVGAVVGIALIVL 249 Query: 251 GRHQRGQAIAFGPCLATAGMLTLLMG 276 + R I FGP LA AG++ L+ G Sbjct: 250 AKRGRDIPIPFGPYLAAAGLIALVYG 275 >ref|YP_001101028.1| type 4 prepilin-like proteins leader peptide processing enzyme [Herminiimonas arsenicoxydans] emb|CAL62907.1| type 4 prepilin-like proteins leader peptide processing enzyme (Protein secretion protein XCPA)[Includes: Leader peptidase (Prepilin peptidase); N-methyltransferase ] [Herminiimonas arsenicoxydans] Length = 286 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 147/253 (58%), Positives = 185/253 (73%) Query: 11 GNAALAGAAALLGLLVGSFLNVVIHRVPLMMLRETANFVAQERGEALPHADRYNLWLPAS 70 G+ A A + GLL+GSFLNVVIHR+P MM RE+ N+VA E G+ LPH +RY+L +P S Sbjct: 10 GSVLPAIVAGVFGLLIGSFLNVVIHRIPKMMQRESDNYVAHESGKPLPHEERYDLLMPRS 69 Query: 71 ACPHCAAPLALHHKIPVLSWLLLRGRCAFCANPISARYPLVELLTAMLFALLGWRFGLGL 130 ACP C + IPV S+ LRG+C C IS RYP+VELLT +L A L W FG GL Sbjct: 70 ACPQCGHQITAVENIPVFSYAFLRGKCIACKTHISMRYPVVELLTGVLSAFLIWHFGSGL 129 Query: 131 HGVALMVCASFLIALAVIDARTMLLPDDLTLPLMWLGMLVNVVHRLVPLQDAVLGAMAGY 190 G+A +V A LIA+ IDA T LLPDDLTL L+WLG+L+N+ VPL++AV+GA AGY Sbjct: 130 LGLATLVFAYLLIAMTFIDADTQLLPDDLTLSLLWLGLLLNLNATFVPLEEAVIGATAGY 189 Query: 191 GVLWLIYWIFKLATGKEGLGYGDFKLMAALGAWLGWQALPLVLLLASALGAVLGLALMGL 250 LW IYW+FKLATGKEG+GYGDFKL+AALGAWLGW+ LP+++LL+S +GAV+G+AL+ L Sbjct: 190 MSLWSIYWLFKLATGKEGMGYGDFKLLAALGAWLGWKMLPVIILLSSLVGAVVGIALIML 249 Query: 251 GRHQRGQAIAFGP 263 + R I FGP Sbjct: 250 AKRGRDIPIPFGP 262