BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0122.p (347 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_995552.1| extracellular solute-binding protein [Vermineph... 448 e-124 ref|YP_002942231.1| family 1 extracellular solute-binding protei... 443 e-122 ref|YP_004152648.1| family 1 extracellular solute-binding protei... 441 e-122 ref|YP_550733.1| extracellular solute-binding protein [Polaromon... 441 e-121 ref|ZP_08874182.1| family 1 extracellular solute-binding protein... 432 e-119 >ref|YP_995552.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gb|ABM56534.1| extracellular solute-binding protein, family 1 [Verminephrobacter eiseniae EF01-2] Length = 374 Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats. Identities = 221/340 (65%), Positives = 274/340 (80%), Gaps = 3/340 (0%) Query: 8 AALGLLLAATAAQGQAQTRTLYVGMNGGNMEKTFTQAVFAPFEQKYNVKIAVVPGGSADI 67 AA+ +LA +A QT+TLY+GMNGG ME+T+TQ F FE++Y V++ VVPG S+DI Sbjct: 38 AAVASMLAGSAV---GQTKTLYIGMNGGLMERTYTQHAFPAFEKQYGVRVVVVPGTSSDI 94 Query: 68 LAKAQAAKDKPQMHLMFLDDGVMYRAVGMGLCEKQKPNPNLANLLPVAHIKDDLATGVTI 127 LAKA+A K++PQMHLMFLDDG+M RA+GMGLCE+Q+PNP+L ++ P A +DDLA+GV++ Sbjct: 95 LAKARAHKERPQMHLMFLDDGIMVRAIGMGLCERQRPNPHLNDIHPAARFRDDLASGVSL 154 Query: 128 SVTGLAYNTKVYAEKGWAPPTSWLDLADPKLKGRVVFQSLPSSTFGLHAFLAFNQLKGGT 187 ++TGLAYNTK++A+KGWA P SW+DLADPK KGRVVFQSLPSSTFGLH F+ FN+++GG Sbjct: 155 TMTGLAYNTKMFADKGWAAPASWMDLADPKYKGRVVFQSLPSSTFGLHGFMMFNRIQGGN 214 Query: 188 DANVDPGFKAWPSTIGPNVLEYISNSAKISEMAQTGEAALFPYTPTQSTLLKSKGVPVEY 247 D NV+PGFKAW TIGPNVLEYI+NSAKISEM QTGEAALFP TPT LK KG+PVEY Sbjct: 215 DKNVEPGFKAWGHTIGPNVLEYIANSAKISEMVQTGEAALFPLTPTAVVALKLKGIPVEY 274 Query: 248 VQPKEGAIVLMVAQCVIANNTEPQLAQELAAYLLSPQAQALALENGNYNPTNTKVQVSGT 307 QPKEGA++L+ AQCVIA N+EP+LAQ+LA +LL PQAQA AL+ G PTN KV SG Sbjct: 275 AQPKEGAVMLLTAQCVIAKNSEPELAQKLAEFLLGPQAQANALQFGAQIPTNPKVAASGE 334 Query: 308 AAAEQARMNGFVKAARAVDWDEINKNRAVWNTRWSRTIER 347 +AA AR N ++ A VDWD IN +R WN RW++TIER Sbjct: 335 SAALVARFNQWMGNAVTVDWDSINASRPAWNVRWNKTIER 374 >ref|YP_002942231.1| family 1 extracellular solute-binding protein [Variovorax paradoxus S110] gb|ACS16965.1| extracellular solute-binding protein family 1 [Variovorax paradoxus S110] Length = 358 Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 211/324 (65%), Positives = 261/324 (80%) Query: 24 QTRTLYVGMNGGNMEKTFTQAVFAPFEQKYNVKIAVVPGGSADILAKAQAAKDKPQMHLM 83 QT+TLY+GMNGG MEK +TQ VF FE+ Y K+ VVPG S+DILAKAQA KD+PQMH+M Sbjct: 35 QTKTLYIGMNGGTMEKAYTQYVFPAFEKLYGAKVVVVPGTSSDILAKAQANKDRPQMHVM 94 Query: 84 FLDDGVMYRAVGMGLCEKQKPNPNLANLLPVAHIKDDLATGVTISVTGLAYNTKVYAEKG 143 FLDDG+M RA+GMGLC+KQ+PNP+LA + P A KDD+A+GV++ +TGLAYN K++ EKG Sbjct: 95 FLDDGIMVRAIGMGLCQKQRPNPSLAEIYPAARFKDDMASGVSLGMTGLAYNAKMFKEKG 154 Query: 144 WAPPTSWLDLADPKLKGRVVFQSLPSSTFGLHAFLAFNQLKGGTDANVDPGFKAWPSTIG 203 WAPPTSW+DLADPK KG+VVFQS+ SS+FGLH FL FN+++GG D NV+PGFKAWP+TIG Sbjct: 155 WAPPTSWMDLADPKYKGKVVFQSMSSSSFGLHGFLMFNRIQGGNDKNVEPGFKAWPTTIG 214 Query: 204 PNVLEYISNSAKISEMAQTGEAALFPYTPTQSTLLKSKGVPVEYVQPKEGAIVLMVAQCV 263 PNVLEYI +SAK+SEM QTGEAA+FP TPT LK+KG+PVEY PKEGA+VLMV QCV Sbjct: 215 PNVLEYIPSSAKLSEMVQTGEAAIFPLTPTAVAALKTKGIPVEYAPPKEGAVVLMVGQCV 274 Query: 264 IANNTEPQLAQELAAYLLSPQAQALALENGNYNPTNTKVQVSGTAAAEQARMNGFVKAAR 323 IANN+EP+L+Q+LA +LLSP AQA L+ G PTN K G A+ A +N ++K A Sbjct: 275 IANNSEPELSQKLAEFLLSPLAQANVLQYGAQIPTNPKAPAVGDGVAQVADINKWMKTAV 334 Query: 324 AVDWDEINKNRAVWNTRWSRTIER 347 +DWD IN NR WN RW++TIE+ Sbjct: 335 TIDWDSINANRPAWNARWNKTIEK 358 >ref|YP_004152648.1| family 1 extracellular solute-binding protein [Variovorax paradoxus EPS] gb|ADU34537.1| extracellular solute-binding protein family 1 [Variovorax paradoxus EPS] Length = 355 Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats. Identities = 222/348 (63%), Positives = 274/348 (78%), Gaps = 4/348 (1%) Query: 3 SLSRT---AALGLLLAATAAQGQAQTRTLYVGMNGGNMEKTFTQAVFAPFEQKYNVKIAV 59 SL RT AA LLAAT A AQT+TLY+GMNGG MEK +TQ VF FE+ Y K+ V Sbjct: 9 SLRRTLLGAAAVSLLAATGA-ASAQTKTLYIGMNGGTMEKAYTQYVFPAFEKLYGAKVVV 67 Query: 60 VPGGSADILAKAQAAKDKPQMHLMFLDDGVMYRAVGMGLCEKQKPNPNLANLLPVAHIKD 119 VPG S+DILAKAQA KD+PQMH+MFLDDG+M RA+GMGLC+KQKPNP+LA + P A KD Sbjct: 68 VPGTSSDILAKAQANKDRPQMHVMFLDDGIMVRAIGMGLCQKQKPNPSLAEIYPAARFKD 127 Query: 120 DLATGVTISVTGLAYNTKVYAEKGWAPPTSWLDLADPKLKGRVVFQSLPSSTFGLHAFLA 179 D+A+GV++ +TGLAYN K++ EKGWA PTSW+DLADPK KG+VVFQS+ SS+FGLH FL Sbjct: 128 DMASGVSLGMTGLAYNAKMFKEKGWAAPTSWMDLADPKFKGKVVFQSMSSSSFGLHGFLM 187 Query: 180 FNQLKGGTDANVDPGFKAWPSTIGPNVLEYISNSAKISEMAQTGEAALFPYTPTQSTLLK 239 FN+++GG D NV+PGFKAWP+T+GPNVLEYI +SAK+SEM QTGEAA+FP TPT LK Sbjct: 188 FNRIQGGNDKNVEPGFKAWPTTVGPNVLEYIPSSAKLSEMVQTGEAAIFPLTPTAVAALK 247 Query: 240 SKGVPVEYVQPKEGAIVLMVAQCVIANNTEPQLAQELAAYLLSPQAQALALENGNYNPTN 299 +KG+PVEY PKEGA+VLMV QCVIANN+EP+L+Q+LA +LLSP AQA L+ G PTN Sbjct: 248 TKGIPVEYAPPKEGAVVLMVGQCVIANNSEPELSQKLAEFLLSPLAQANVLQYGAQIPTN 307 Query: 300 TKVQVSGTAAAEQARMNGFVKAARAVDWDEINKNRAVWNTRWSRTIER 347 K G A + A +N ++K A +DW+ IN NR WN+RW++TIE+ Sbjct: 308 PKAPAVGEGATQVADINKWMKTAITIDWESINANRPAWNSRWNKTIEK 355 >ref|YP_550733.1| extracellular solute-binding protein [Polaromonas sp. JS666] gb|ABE45835.1| extracellular solute-binding protein, family 1 [Polaromonas sp. JS666] Length = 355 Score = 441 bits (1133), Expect = e-121, Method: Composition-based stats. Identities = 219/325 (67%), Positives = 265/325 (81%) Query: 23 AQTRTLYVGMNGGNMEKTFTQAVFAPFEQKYNVKIAVVPGGSADILAKAQAAKDKPQMHL 82 AQT+TLY+GMNGG MEKT+T VF FE+ NVK+ VVPG S+DILAKAQA KD PQMH+ Sbjct: 31 AQTKTLYIGMNGGTMEKTYTGHVFGAFEKANNVKVVVVPGTSSDILAKAQANKDNPQMHV 90 Query: 83 MFLDDGVMYRAVGMGLCEKQKPNPNLANLLPVAHIKDDLATGVTISVTGLAYNTKVYAEK 142 MFLDDG+MYRA+GMGLCEK +P+P L +L P A K D+A GV + +TGLAYN K++ EK Sbjct: 91 MFLDDGIMYRAIGMGLCEKMQPSPALNDLFPTARFKGDMAAGVNVGMTGLAYNKKMFTEK 150 Query: 143 GWAPPTSWLDLADPKLKGRVVFQSLPSSTFGLHAFLAFNQLKGGTDANVDPGFKAWPSTI 202 GWAPPTSW+DLADPK KG+VVFQSL SSTFGLH FL FN+++GGTD NV+PGFKAWP+TI Sbjct: 151 GWAPPTSWMDLADPKFKGKVVFQSLSSSTFGLHGFLLFNRIQGGTDKNVEPGFKAWPTTI 210 Query: 203 GPNVLEYISNSAKISEMAQTGEAALFPYTPTQSTLLKSKGVPVEYVQPKEGAIVLMVAQC 262 GPNVLEYI +SAK++EM QTGEAA+FP TPT +LK KG+PVEYVQPKEG+ VL V +C Sbjct: 211 GPNVLEYIPSSAKLAEMVQTGEAAMFPLTPTAVGVLKDKGLPVEYVQPKEGSAVLTVGEC 270 Query: 263 VIANNTEPQLAQELAAYLLSPQAQALALENGNYNPTNTKVQVSGTAAAEQARMNGFVKAA 322 VIA N+EP LA +LA YLLSP+AQA ALE+G+ P+N K + SGTAAA +MN ++K A Sbjct: 271 VIAKNSEPALAHKLAQYLLSPEAQAAALEHGDQIPSNPKTKASGTAAALVKQMNDYMKTA 330 Query: 323 RAVDWDEINKNRAVWNTRWSRTIER 347 VDWD IN+NR WN RW++T+ER Sbjct: 331 VTVDWDAINENRPAWNARWNKTVER 355 >ref|ZP_08874182.1| family 1 extracellular solute-binding protein [Verminephrobacter sp. At4] Length = 356 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 205/325 (63%), Positives = 261/325 (80%) Query: 23 AQTRTLYVGMNGGNMEKTFTQAVFAPFEQKYNVKIAVVPGGSADILAKAQAAKDKPQMHL 82 AQTRTLYVGMNGG MEKT+T VF FE+ + VK+ VVPG S+DILAKAQA KD+PQMH+ Sbjct: 32 AQTRTLYVGMNGGIMEKTYTHHVFPIFEKLHAVKVVVVPGTSSDILAKAQANKDRPQMHV 91 Query: 83 MFLDDGVMYRAVGMGLCEKQKPNPNLANLLPVAHIKDDLATGVTISVTGLAYNTKVYAEK 142 M LDDGVM RA+ +GLCEKQ+PNP+L ++ P A +DD+A+GV + +TG+AYNT+++AEK Sbjct: 92 MLLDDGVMMRAISLGLCEKQRPNPHLNDIYPTARFRDDMASGVGLGMTGIAYNTRMFAEK 151 Query: 143 GWAPPTSWLDLADPKLKGRVVFQSLPSSTFGLHAFLAFNQLKGGTDANVDPGFKAWPSTI 202 GWA P+SW+D ADPK KG+VVFQS+PSS+FGLH F+ FN+++GG + NV+PGF AW TI Sbjct: 152 GWAAPSSWMDFADPKYKGKVVFQSIPSSSFGLHGFMMFNRIQGGNERNVEPGFNAWAKTI 211 Query: 203 GPNVLEYISNSAKISEMAQTGEAALFPYTPTQSTLLKSKGVPVEYVQPKEGAIVLMVAQC 262 GPNVLEYI +SAKISEM QTGEAALFP TPT + +LK+KG+PVEYVQP+EG++VLM+ QC Sbjct: 212 GPNVLEYIPSSAKISEMVQTGEAALFPLTPTAAAVLKTKGIPVEYVQPREGSVVLMIGQC 271 Query: 263 VIANNTEPQLAQELAAYLLSPQAQALALENGNYNPTNTKVQVSGTAAAEQARMNGFVKAA 322 VIA N+ P+LAQ+L +LLSPQAQA L+ G PTN K G AA+ A++ ++K A Sbjct: 272 VIAKNSAPELAQKLTEFLLSPQAQANVLQFGAQIPTNPKAPAVGEGAAQVAQIKQWLKNA 331 Query: 323 RAVDWDEINKNRAVWNTRWSRTIER 347 +DWD +N NR WN RW++TIER Sbjct: 332 VTLDWDSVNANRPAWNARWNKTIER 356