BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0117.p (316 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773796.1| octaprenyldiphosphate synthase [Herbaspirill... 562 e-158 ref|YP_004754566.1| octaprenyl diphosphate synthase [Collimonas ... 503 e-140 ref|YP_001354685.1| octaprenyl-diphosphate synthase [Janthinobac... 467 e-130 gb|ACN58969.1| octaprenyl diphosphate synthase [uncultured bacte... 466 e-129 ref|YP_001101025.1| octaprenyl diphosphate synthase [Herminiimon... 448 e-124 >ref|YP_003773796.1| octaprenyldiphosphate synthase [Herbaspirillum seropedicae SmR1] gb|ADJ61888.1| octaprenyldiphosphate synthase protein [Herbaspirillum seropedicae SmR1] Length = 309 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 307/309 (99%), Positives = 307/309 (99%) Query: 8 MEAVNAVIRRQLYSEVPLVNQVAEYIISAGGKRLRPVLVVLIANAFGYKGEHHHSLAAVI 67 MEAVNAVIRRQLYSEVPLVNQVAEYIISAGGKRLRPVLVVLIANAFGYKGEHHHSLAAVI Sbjct: 1 MEAVNAVIRRQLYSEVPLVNQVAEYIISAGGKRLRPVLVVLIANAFGYKGEHHHSLAAVI 60 Query: 68 EFIHTATLLHDDVVDESSLRRGKQTANAMFGNAASVLVGDFLYSRAFQMMVAVGNPRVME 127 EFIHTATLLHDDVVDESSLRRGKQTANAMFGNAASVLVGDFLYSRAFQMMVAVGNPRVME Sbjct: 61 EFIHTATLLHDDVVDESSLRRGKQTANAMFGNAASVLVGDFLYSRAFQMMVAVGNPRVME 120 Query: 128 IVADATNVIAEGEVLQLLNMHNPDVDEAGYLQVIRSKTAKLFEAASQIGALIAGADEAGI 187 IVADATNVIAEGEVLQLLNMHNPDVDE GYLQVIRSKTAKLFEAASQIGALIAGADEAGI Sbjct: 121 IVADATNVIAEGEVLQLLNMHNPDVDENGYLQVIRSKTAKLFEAASQIGALIAGADEAGI 180 Query: 188 EAAGEYGRSIGTAFQLIDDVLDYSGNSAEIGKNVGDDLREGKPTLPLIWLMQHGTPQQRE 247 EAA EYGRSIGTAFQLIDDVLDYSGNSAEIGKNVGDDLREGKPTLPLIWLMQHGTPQQRE Sbjct: 181 EAAAEYGRSIGTAFQLIDDVLDYSGNSAEIGKNVGDDLREGKPTLPLIWLMQHGTPQQRE 240 Query: 248 LVRTCIENGDEQHFDEVLSAITHSGALAYTREQAEIAARRAADAIISLPDSQFKKSLLEL 307 LVRTCIENGDEQHFDEVLSAITHSGALAYTREQAEIAARRAADAIISLPDSQFKKSLLEL Sbjct: 241 LVRTCIENGDEQHFDEVLSAITHSGALAYTREQAEIAARRAADAIISLPDSQFKKSLLEL 300 Query: 308 SAFAVDRNH 316 SAFAVDRNH Sbjct: 301 SAFAVDRNH 309 >ref|YP_004754566.1| octaprenyl diphosphate synthase [Collimonas fungivorans Ter331] gb|AEK63743.1| octaprenyl diphosphate synthase [Collimonas fungivorans Ter331] Length = 329 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 263/316 (83%), Positives = 291/316 (92%) Query: 1 MHPIVADMEAVNAVIRRQLYSEVPLVNQVAEYIISAGGKRLRPVLVVLIANAFGYKGEHH 60 M PI ADMEAVNAVIRRQL+S+VPLVNQ+AEYIISAGGKRLRPVLV+L+A A+GY GE H Sbjct: 14 MSPIAADMEAVNAVIRRQLHSDVPLVNQIAEYIISAGGKRLRPVLVLLMAQAYGYSGEKH 73 Query: 61 HSLAAVIEFIHTATLLHDDVVDESSLRRGKQTANAMFGNAASVLVGDFLYSRAFQMMVAV 120 H LAAVIEFIHTATLLHDDVVDESSLRRG+QTANA+FGNAASVLVGDFLYSRAFQMMVAV Sbjct: 74 HELAAVIEFIHTATLLHDDVVDESSLRRGRQTANALFGNAASVLVGDFLYSRAFQMMVAV 133 Query: 121 GNPRVMEIVADATNVIAEGEVLQLLNMHNPDVDEAGYLQVIRSKTAKLFEAASQIGALIA 180 N RVM+IVADATNVIAEGEVLQLLNMHNPDV E YLQVIRSKTAKLFEAA+Q+GALIA Sbjct: 134 DNARVMQIVADATNVIAEGEVLQLLNMHNPDVSEENYLQVIRSKTAKLFEAAAQLGALIA 193 Query: 181 GADEAGIEAAGEYGRSIGTAFQLIDDVLDYSGNSAEIGKNVGDDLREGKPTLPLIWLMQH 240 GA + I+AAGEYGRS+GTAFQLIDDVLDYSGN+ +IGKNVGDDLREGKPTLPLI+LM+H Sbjct: 194 GAGDDAIDAAGEYGRSLGTAFQLIDDVLDYSGNAGDIGKNVGDDLREGKPTLPLIYLMEH 253 Query: 241 GTPQQRELVRTCIENGDEQHFDEVLSAITHSGALAYTREQAEIAARRAADAIISLPDSQF 300 G+ +QR LVR+CIENGDEQHFDE+L+AIT SGAL YTR +AE A++RAA AI LP+SQF Sbjct: 254 GSAEQRALVRSCIENGDEQHFDEILAAITSSGALNYTRHEAEKASQRAAAAISGLPNSQF 313 Query: 301 KKSLLELSAFAVDRNH 316 K SLL+LSAFAVDRNH Sbjct: 314 KDSLLQLSAFAVDRNH 329 >ref|YP_001354685.1| octaprenyl-diphosphate synthase [Janthinobacterium sp. Marseille] gb|ABR88769.1| octaprenyl-diphosphate synthase [Janthinobacterium sp. Marseille] Length = 334 Score = 467 bits (1202), Expect = e-130, Method: Composition-based stats. Identities = 240/316 (75%), Positives = 282/316 (89%) Query: 1 MHPIVADMEAVNAVIRRQLYSEVPLVNQVAEYIISAGGKRLRPVLVVLIANAFGYKGEHH 60 + PI AD+ AV+ VIR++L+SEV LVNQ+A+YIISAGGKR+RPVLV+L+ANA+GY+G H Sbjct: 19 IQPIAADLNAVDTVIRQKLHSEVALVNQIADYIISAGGKRIRPVLVLLMANAYGYRGTDH 78 Query: 61 HSLAAVIEFIHTATLLHDDVVDESSLRRGKQTANAMFGNAASVLVGDFLYSRAFQMMVAV 120 H LAAV+EFIHTATLLHDDVVDESSLRRG++TANA+FGNAASVLVGDFLYSRAFQMMV+V Sbjct: 79 HQLAAVVEFIHTATLLHDDVVDESSLRRGRKTANALFGNAASVLVGDFLYSRAFQMMVSV 138 Query: 121 GNPRVMEIVADATNVIAEGEVLQLLNMHNPDVDEAGYLQVIRSKTAKLFEAASQIGALIA 180 G+ R+M+I+ADATNVIAEGEVLQLLNMH+PDV E Y QVIRSKTAKLFEAA+Q+G LIA Sbjct: 139 GDIRIMQILADATNVIAEGEVLQLLNMHDPDVSEERYTQVIRSKTAKLFEAAAQLGTLIA 198 Query: 181 GADEAGIEAAGEYGRSIGTAFQLIDDVLDYSGNSAEIGKNVGDDLREGKPTLPLIWLMQH 240 GA + IEAA EYGRS+GTAFQLIDDVLDYSG + +IGKNVGDDLREGK TLPLI+LM+H Sbjct: 199 GASDDEIEAAAEYGRSLGTAFQLIDDVLDYSGQADDIGKNVGDDLREGKATLPLIYLMEH 258 Query: 241 GTPQQRELVRTCIENGDEQHFDEVLSAITHSGALAYTREQAEIAARRAADAIISLPDSQF 300 GTP+QRELVR+CIENGDEQHFD VL A+T SGAL YT+ +AE A+ RA +I LPD+ F Sbjct: 259 GTPEQRELVRSCIENGDEQHFDAVLQAVTTSGALDYTKRKAEEASARATASIAGLPDNAF 318 Query: 301 KKSLLELSAFAVDRNH 316 K +LL+LSAFAV+RNH Sbjct: 319 KDALLKLSAFAVNRNH 334 >gb|ACN58969.1| octaprenyl diphosphate synthase [uncultured bacterium BLR10] Length = 348 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 243/315 (77%), Positives = 287/315 (91%) Query: 2 HPIVADMEAVNAVIRRQLYSEVPLVNQVAEYIISAGGKRLRPVLVVLIANAFGYKGEHHH 61 H I ADM+AVN VIRR+L+SEV LVNQ+AEYIISAGGKR+RPVLV+L+ANA+ YKG HH Sbjct: 34 HTIAADMDAVNTVIRRKLHSEVSLVNQIAEYIISAGGKRIRPVLVLLVANAYSYKGTAHH 93 Query: 62 SLAAVIEFIHTATLLHDDVVDESSLRRGKQTANAMFGNAASVLVGDFLYSRAFQMMVAVG 121 LAAV+EFIHTATLLHDDVVDESSLRRG+ TANA+FGNAASVLVGDFLYSRAFQMMV + Sbjct: 94 ELAAVVEFIHTATLLHDDVVDESSLRRGRATANALFGNAASVLVGDFLYSRAFQMMVGLN 153 Query: 122 NPRVMEIVADATNVIAEGEVLQLLNMHNPDVDEAGYLQVIRSKTAKLFEAASQIGALIAG 181 N RVM+I++DATNVIAEGEVLQLLNMH+PDV + YLQVIRSKTAKLFEAA+++GAL++G Sbjct: 154 NMRVMQILSDATNVIAEGEVLQLLNMHDPDVSQERYLQVIRSKTAKLFEAAAELGALVSG 213 Query: 182 ADEAGIEAAGEYGRSIGTAFQLIDDVLDYSGNSAEIGKNVGDDLREGKPTLPLIWLMQHG 241 A++A IEAAGEYGRS+GTAFQLIDDVLDY+G++ EIGKNVGDDLREGKPTLPLI+LM++G Sbjct: 214 ANDAQIEAAGEYGRSLGTAFQLIDDVLDYAGDANEIGKNVGDDLREGKPTLPLIYLMENG 273 Query: 242 TPQQRELVRTCIENGDEQHFDEVLSAITHSGALAYTREQAEIAARRAADAIISLPDSQFK 301 TP+QRELVR+CIE GDEQHFD +L+AIT SGAL YTR+QA AA+RAA+AI LPDS +K Sbjct: 274 TPEQRELVRSCIEQGDEQHFDTILAAITSSGALEYTRQQAVTAAKRAAEAIAGLPDSIYK 333 Query: 302 KSLLELSAFAVDRNH 316 +SLL+L+ F+V+R H Sbjct: 334 ESLLQLADFSVNRTH 348 >ref|YP_001101025.1| octaprenyl diphosphate synthase [Herminiimonas arsenicoxydans] emb|CAL62904.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase) (OPP synthetase) [Herminiimonas arsenicoxydans] Length = 329 Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats. Identities = 240/316 (75%), Positives = 279/316 (88%) Query: 1 MHPIVADMEAVNAVIRRQLYSEVPLVNQVAEYIISAGGKRLRPVLVVLIANAFGYKGEHH 60 + PI ADM AV+AVIR++L+SEV LVNQ+A+YIISAGGKR+RPVLV+L+ANA GY+G H Sbjct: 14 IQPIAADMSAVDAVIRQKLHSEVALVNQIADYIISAGGKRIRPVLVLLMANALGYRGTHQ 73 Query: 61 HSLAAVIEFIHTATLLHDDVVDESSLRRGKQTANAMFGNAASVLVGDFLYSRAFQMMVAV 120 + LAAV+EFIHTATLLHDDVVDES LRRG++TANA+FGNAASVLVGDFL+SRAFQMMV V Sbjct: 74 YDLAAVVEFIHTATLLHDDVVDESELRRGRKTANALFGNAASVLVGDFLHSRAFQMMVTV 133 Query: 121 GNPRVMEIVADATNVIAEGEVLQLLNMHNPDVDEAGYLQVIRSKTAKLFEAASQIGALIA 180 GN R M+I+ADATNVIAEGEVLQLLNMH+PD+ E Y QVIRSKTAKLFEAA+Q+GALIA Sbjct: 134 GNIRAMQILADATNVIAEGEVLQLLNMHDPDISEERYTQVIRSKTAKLFEAAAQLGALIA 193 Query: 181 GADEAGIEAAGEYGRSIGTAFQLIDDVLDYSGNSAEIGKNVGDDLREGKPTLPLIWLMQH 240 GA E IEAA EYGRS+GTAFQLIDDVLDYSG++ +IGKNVGDDLREGK TLPLI+LM+H Sbjct: 194 GASEDEIEAAAEYGRSLGTAFQLIDDVLDYSGHAEDIGKNVGDDLREGKATLPLIYLMEH 253 Query: 241 GTPQQRELVRTCIENGDEQHFDEVLSAITHSGALAYTREQAEIAARRAADAIISLPDSQF 300 G +QRELVR+CIENGDE+HFD VL A+T SGAL YT+ +AE AA RAA +I LP+SQF Sbjct: 254 GNTEQRELVRSCIENGDEEHFDAVLLAVTTSGALDYTKRKAEEAAARAAASIAGLPESQF 313 Query: 301 KKSLLELSAFAVDRNH 316 K +LL LS+FAV RNH Sbjct: 314 KDALLNLSSFAVHRNH 329