BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0109.p         (143 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773804.1| hypothetical protein Hsero_0371 [Herbaspiril...   195   2e-48
ref|YP_001101173.1| hypothetical protein HEAR2939 [Herminiimonas...    91   5e-17
ref|ZP_08274819.1| hypothetical protein IMCC9480_3499 [Oxalobact...    84   7e-15
ref|YP_003979477.1| hypothetical protein AXYL_03442 [Achromobact...    84   9e-15
ref|NP_889575.1| hypothetical protein BB3039 [Bordetella bronchi...    81   6e-14

>ref|YP_003773804.1| hypothetical protein Hsero_0371 [Herbaspirillum seropedicae SmR1]
 emb|CAM32652.1| Exported protein [Herbaspirillum seropedicae]
 gb|ADJ61896.1| exported protein [Herbaspirillum seropedicae SmR1]
          Length = 137

 Score =  195 bits (495), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 117/134 (87%), Positives = 129/134 (96%)

Query: 9   MPNQTATLRHQLLRSASALVIGLAALGGASHVFAAGKAGNSEYQQQIAACKSGASTEDRA 68
           MPN TATLRHQLLRSASALVIGLAALGGASHV AAGK  NS+YQQQ+AACK+G+S+EDRA
Sbjct: 1   MPNSTATLRHQLLRSASALVIGLAALGGASHVLAAGKTDNSDYQQQVAACKNGSSSEDRA 60

Query: 69  TCLREAGAAQQAAARGTLTDPGAAQLKENALRRCEGLPQSDRIDCEKRVNGQGRVDGSVA 128
           TCLREAGAA+QAA+RG LTDPGAAQLKENA++RCEGLPQSDRIDCEKRVNG+GRV+GSV+
Sbjct: 61  TCLREAGAARQAASRGNLTDPGAAQLKENAMKRCEGLPQSDRIDCEKRVNGEGRVEGSVS 120

Query: 129 EGGILRETVTIVPA 142
           EGGILRETVTIVPA
Sbjct: 121 EGGILRETVTIVPA 134


>ref|YP_001101173.1| hypothetical protein HEAR2939 [Herminiimonas arsenicoxydans]
 emb|CAL63052.1| Conserved hypothetical protein; putative exported protein
           [Herminiimonas arsenicoxydans]
          Length = 148

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 59/119 (49%), Positives = 74/119 (62%), Gaps = 1/119 (0%)

Query: 22  RSASALVIGLAALGGASHVFAAGKAGNSEYQQQIAACKSGASTEDRATCLREAGAAQQAA 81
           + A AL +    L   S    A  A  S YQQ+ AAC  G + ED+ATCL+EAGAA   A
Sbjct: 13  QRALALAVFAVGLSLGSTAALAADAATSTYQQERAACLKGQTYEDKATCLKEAGAALNDA 72

Query: 82  ARGTLTDPGAAQLKENALRRCEGLPQSDRIDCEKRVNGQGRVDGSVAEGGILRETVTIV 140
            RG L++ GAA  ++NAL RC  LP +DR DC +RV G+G V GSV  GGI RET T++
Sbjct: 73  RRGRLSE-GAASYEQNALMRCNALPAADREDCARRVRGEGTVSGSVGTGGIYRETTTVI 130


>ref|ZP_08274819.1| hypothetical protein IMCC9480_3499 [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF31726.1| hypothetical protein IMCC9480_3499 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 126

 Score = 84.0 bits (206), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 52/118 (44%), Positives = 70/118 (59%), Gaps = 1/118 (0%)

Query: 25  SALVIGLAALGGASHVFAAGKAGNSEYQQQIAACKSGASTEDRATCLREAGAAQQAAARG 84
           +A+V+     G A+    +  +    YQ     C +G S +  ATCL+EAGAA+  A R 
Sbjct: 6   TAVVLAATLGGNANAAEPSATSAEERYQSDRVICLTGQSNQSEATCLKEAGAARDEAIRH 65

Query: 85  TLTDPGAAQLKENALRRCEGLPQSDRIDCEKRVNGQGRVDGSVAEGGILRETVTIVPA 142
            L D G A    NA+RRC  LP +D+ DCE R+ G+G V GSV +GG++RET TIVPA
Sbjct: 66  QLGD-GNAPYDANAMRRCATLPPADKRDCESRIRGEGSVSGSVRDGGLIRETTTIVPA 122


>ref|YP_003979477.1| hypothetical protein AXYL_03442 [Achromobacter xylosoxidans A8]
 gb|ADP16762.1| exported protein [Achromobacter xylosoxidans A8]
          Length = 160

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 50/97 (51%), Positives = 65/97 (67%)

Query: 46  AGNSEYQQQIAACKSGASTEDRATCLREAGAAQQAAARGTLTDPGAAQLKENALRRCEGL 105
           +  S+YQQ +AACKSGA+ +D+A C+REAGAA+Q + R  L D G  QL++N L RC  L
Sbjct: 37  SAQSQYQQDVAACKSGATGQDQAACMREAGAARQESGRNNLKDGGTDQLQQNMLDRCNRL 96

Query: 106 PQSDRIDCEKRVNGQGRVDGSVAEGGILRETVTIVPA 142
           P + R DC  ++     V GSV  GG+LRETV  VPA
Sbjct: 97  PAASRQDCVTQMTSPTNVRGSVQGGGVLRETVIQVPA 133


>ref|NP_889575.1| hypothetical protein BB3039 [Bordetella bronchiseptica RB50]
 emb|CAE33531.1| putative exported protein [Bordetella bronchiseptica RB50]
          Length = 189

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 52/125 (41%), Positives = 73/125 (58%), Gaps = 1/125 (0%)

Query: 19  QLLRSASALVIGLAALGGASHVFAAGKAGNSEYQQQIAACKSGASTEDRATCLREAGAAQ 78
           ++ R   AL +G  +L       A   +G S+YQ  +  C SG +++DRATCLREAGAA+
Sbjct: 16  RIQRWCGALALGAGSLMAFGAHAAGTGSGQSQYQMDVQRCNSGDTSQDRATCLREAGAAR 75

Query: 79  QAAARGTLTDPGAAQLKENALRRCEGLPQSDRIDC-EKRVNGQGRVDGSVAEGGILRETV 137
           Q + R  L D    + ++NA+ RC+ LP S + DC  +  +G     GSV  GG+LRETV
Sbjct: 76  QESQRNRLDDKQEGRYQDNAMMRCKNLPASQQQDCITQMTSGNTTTRGSVGGGGVLRETV 135

Query: 138 TIVPA 142
             VPA
Sbjct: 136 IQVPA 140