BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0106.p (325 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773807.1| nitrate/sulfonate/bicarbonate ABC transporte... 581 e-164 ref|ZP_08272673.1| ABC transporter, perplasmic taurine/sulfonate... 465 e-129 ref|YP_001418931.1| NMT1/THI5-like domain-containing protein [Xa... 392 e-107 ref|YP_001923919.1| NMT1/THI5 like domain-containing protein [Me... 384 e-104 ref|YP_002420231.1| family 3 extracellular solute-binding protei... 382 e-104 >ref|YP_003773807.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ61899.1| ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 319 Score = 581 bits (1497), Expect = e-164, Method: Composition-based stats. Identities = 312/318 (98%), Positives = 314/318 (98%) Query: 8 QKQWIALALLACAGFSGASHAADDVIRLGNLKFAHYGAVSYIKEIAPKCGIKVDEKVFAK 67 QK+ IALALLA AGFS ASHAADDVIRLGNLKFAHYGAVSYIKEIAPKCGIKVDEKVFAK Sbjct: 2 QKKLIALALLASAGFSAASHAADDVIRLGNLKFAHYGAVSYIKEIAPKCGIKVDEKVFAK 61 Query: 68 GPDVMQGILAGELDVGTTASEAAISGRANGAPIYVVAGFAKGGARLVAGKDSGIKSVKDL 127 GPDVMQGILAGELDVGTTASEAAISGRANGAPIYVVAGFAKGGARLVAGKDSGIKSVKDL Sbjct: 62 GPDVMQGILAGELDVGTTASEAAISGRANGAPIYVVAGFAKGGARLVAGKDSGIKSVKDL 121 Query: 128 KGKKVGVTRGGIHEVLLDAELGQNGLSAKDVTIVYLAFADLNQALLGKNIDAMMQSEPQS 187 KGKKVGVTRGGIHEVLLDAELGQNGLSAKDVTIVYLAFADLNQALLGKNIDAMMQSEPQS Sbjct: 122 KGKKVGVTRGGIHEVLLDAELGQNGLSAKDVTIVYLAFADLNQALLGKNIDAMMQSEPQS 181 Query: 188 SQAINKGFGVEVMKPYDTPIGEPYRTMVMTEKFYTEKRPLAEKFMRCFLEATKTFIDKPE 247 SQAINKGFGVEVMKPYDTPIGEPYRTMVMTEKFY EKRPLAEKFMRCFLEATKTFIDKPE Sbjct: 182 SQAINKGFGVEVMKPYDTPIGEPYRTMVMTEKFYNEKRPLAEKFMRCFLEATKTFIDKPE 241 Query: 248 VAEKYVREVIFKNQISKEDFYDAIGNSPYAYDITAEHIQVTTDTMAKYGTGKMAKPPVAK 307 VAEKYVREVIFKNQISKEDFYDAIGNSPYAYDITAEHIQ+TTDTMAKYGTGKMAKPPVAK Sbjct: 242 VAEKYVREVIFKNQISKEDFYDAIGNSPYAYDITAEHIQITTDTMAKYGTGKMAKPPVAK 301 Query: 308 DWVKTDLLEQAKKSMNLK 325 DWVKTDLLEQAKKSMNLK Sbjct: 302 DWVKTDLLEQAKKSMNLK 319 >ref|ZP_08272673.1| ABC transporter, perplasmic taurine/sulfonate binding protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF33851.1| ABC transporter, perplasmic taurine/sulfonate binding protein [Oxalobacteraceae bacterium IMCC9480] Length = 325 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 242/314 (77%), Positives = 275/314 (87%), Gaps = 6/314 (1%) Query: 17 LACAGFSGASHAADDVIRLGNLKFAHYGAVSYIKEIAPKCGIKVDEKVFAKGPDVMQGIL 76 +A AG + S A +VIRLGNLK AH+GAVSYIKEIAP+CGIK++E+ FAKG DVMQ I+ Sbjct: 13 VAIAG-TALSAQAQEVIRLGNLKLAHFGAVSYIKEIAPQCGIKIEERTFAKGLDVMQAII 71 Query: 77 AGELDVGTTASEAAISGRANGAPIYVVAGFAKGGARLVAGKDSGIKSVKDLKGKKVGVTR 136 AGELDVG TASEAAI+GRANG PIY+VAGFAKGGA+LVA D+GIKSVKDLKGKKVGVTR Sbjct: 72 AGELDVGATASEAAIAGRANGTPIYIVAGFAKGGAQLVARPDAGIKSVKDLKGKKVGVTR 131 Query: 137 GGIHEVLLDAELGQNGLSA-----KDVTIVYLAFADLNQALLGKNIDAMMQSEPQSSQAI 191 GGI EVLL AELGQNGL++ KDV ++YLA+ DLNQALLGKN+DA+MQ+EPQSSQAI Sbjct: 132 GGIQEVLLAAELGQNGLTSSDSPGKDVQLIYLAYPDLNQALLGKNLDAIMQTEPQSSQAI 191 Query: 192 NKGFGVEVMKPYDTPIGEPYRTMVMTEKFYTEKRPLAEKFMRCFLEATKTFIDKPEVAEK 251 NKGFGV VMKPYDTPIGEP RT+VMTEKFYTEKR +AEKFMRCF++ATKTFID AEK Sbjct: 192 NKGFGVSVMKPYDTPIGEPVRTLVMTEKFYTEKRVVAEKFMRCFVQATKTFIDTKGAAEK 251 Query: 252 YVREVIFKNQISKEDFYDAIGNSPYAYDITAEHIQVTTDTMAKYGTGKMAKPPVAKDWVK 311 YV E IFK QISKEDF DAIGNSPY++DIT EHIQ+TTDTM KYG G+MAKPPVAKD+VK Sbjct: 252 YVTETIFKGQISKEDFNDAIGNSPYSFDITPEHIQITTDTMYKYGVGRMAKPPVAKDFVK 311 Query: 312 TDLLEQAKKSMNLK 325 TDLL+ AKKS+N+K Sbjct: 312 TDLLDLAKKSLNVK 325 >ref|YP_001418931.1| NMT1/THI5-like domain-containing protein [Xanthobacter autotrophicus Py2] gb|ABS69274.1| NMT1/THI5 like domain protein [Xanthobacter autotrophicus Py2] Length = 354 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 201/311 (64%), Positives = 241/311 (77%) Query: 14 LALLACAGFSGASHAADDVIRLGNLKFAHYGAVSYIKEIAPKCGIKVDEKVFAKGPDVMQ 73 LA A F +A +VIR+GNLK AH+ VSYIKEIA CGI VD K+FAKGPDVMQ Sbjct: 43 LAASAVLAFGALPASAQEVIRVGNLKLAHFAGVSYIKEIASSCGITVDLKIFAKGPDVMQ 102 Query: 74 GILAGELDVGTTASEAAISGRANGAPIYVVAGFAKGGARLVAGKDSGIKSVKDLKGKKVG 133 ILAGELDVG TASEAAISGR NGAPIY+V GFA GGARL+A DSGIK+V DLKGKKVG Sbjct: 103 AILAGELDVGATASEAAISGRGNGAPIYIVGGFASGGARLLAVPDSGIKTVADLKGKKVG 162 Query: 134 VTRGGIHEVLLDAELGQNGLSAKDVTIVYLAFADLNQALLGKNIDAMMQSEPQSSQAINK 193 VTRG I EVLL AE+G+ GL+ KD+TI+YL + DLNQALL K +DA+MQ+EPQS+QAI + Sbjct: 163 VTRGSIQEVLLAAEMGKVGLTPKDLTIIYLGYPDLNQALLQKQVDAIMQTEPQSAQAIAR 222 Query: 194 GFGVEVMKPYDTPIGEPYRTMVMTEKFYTEKRPLAEKFMRCFLEATKTFIDKPEVAEKYV 253 GFG E++KPYDTPIG P RT+VM+EKFY A+KFM CF++A KTF+D P+ AEK+V Sbjct: 223 GFGTEMLKPYDTPIGAPVRTLVMSEKFYNGSPEAAKKFMACFVKAQKTFMDDPKAAEKFV 282 Query: 254 REVIFKNQISKEDFYDAIGNSPYAYDITAEHIQVTTDTMAKYGTGKMAKPPVAKDWVKTD 313 + +FK Q++ E+F +A+ NSPY ITA+HIQ TTD MAKYG GKM+ P A DWVK D Sbjct: 283 TQDVFKGQLTAEEFQEALANSPYTLSITADHIQKTTDVMAKYGIGKMSTPAKAADWVKLD 342 Query: 314 LLEQAKKSMNL 324 LL+ AK S + Sbjct: 343 LLDAAKASAGI 353 >ref|YP_001923919.1| NMT1/THI5 like domain-containing protein [Methylobacterium populi BJ001] gb|ACB79384.1| NMT1/THI5 like domain protein [Methylobacterium populi BJ001] Length = 326 Score = 384 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 188/295 (63%), Positives = 239/295 (81%) Query: 28 AADDVIRLGNLKFAHYGAVSYIKEIAPKCGIKVDEKVFAKGPDVMQGILAGELDVGTTAS 87 +A +V+R+GNLK AH+ VSY+KEIA CGI VD K+FAKGPD+MQ +LAGELDVG TAS Sbjct: 29 SAQEVVRVGNLKLAHFAGVSYVKEIAKTCGIAVDLKIFAKGPDIMQAMLAGELDVGATAS 88 Query: 88 EAAISGRANGAPIYVVAGFAKGGARLVAGKDSGIKSVKDLKGKKVGVTRGGIHEVLLDAE 147 EAAIS R NGAP+ +V GFAKGGARL+A +SGIKS DLKGKKVGVTRG I EVLL AE Sbjct: 89 EAAISARGNGAPVTIVGGFAKGGARLLATPESGIKSAADLKGKKVGVTRGSIQEVLLAAE 148 Query: 148 LGQNGLSAKDVTIVYLAFADLNQALLGKNIDAMMQSEPQSSQAINKGFGVEVMKPYDTPI 207 + ++GL ++DV ++YL + DLNQALL K +DA+MQ+EPQS+QAI +GFGVEV+KPYDTP+ Sbjct: 149 MAKHGLKSRDVNLIYLGYPDLNQALLQKQVDAIMQTEPQSAQAIARGFGVEVIKPYDTPV 208 Query: 208 GEPYRTMVMTEKFYTEKRPLAEKFMRCFLEATKTFIDKPEVAEKYVREVIFKNQISKEDF 267 G P RT+VMTEKFY EK+P+A KFM CF++A KTF+D P+ AE +V + +FK Q++ +F Sbjct: 209 GSPIRTLVMTEKFYGEKKPVATKFMECFVKAQKTFMDDPKAAETFVTQDVFKGQVTAAEF 268 Query: 268 YDAIGNSPYAYDITAEHIQVTTDTMAKYGTGKMAKPPVAKDWVKTDLLEQAKKSM 322 +A+ NSPY +++A+HIQ TTD MA++G GKM+KP A DWVK DLLE AK S+ Sbjct: 269 QEALANSPYTLEMSADHIQKTTDVMAEHGIGKMSKPAKAADWVKLDLLEAAKASV 323 >ref|YP_002420231.1| family 3 extracellular solute-binding protein [Methylobacterium chloromethanicum CM4] ref|YP_002962218.1| Extracellular solute-binding protein, family 3 precursor [methylobacterium extorquens AM1] gb|ACK82303.1| extracellular solute-binding protein family 3 [Methylobacterium chloromethanicum CM4] gb|ACS38941.1| Extracellular solute-binding protein, family 3 precursor [Methylobacterium extorquens AM1] Length = 326 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 187/294 (63%), Positives = 238/294 (80%) Query: 28 AADDVIRLGNLKFAHYGAVSYIKEIAPKCGIKVDEKVFAKGPDVMQGILAGELDVGTTAS 87 +A +V+R+GNLK AH+ VSY+KEIA CG+ VD K+FAKGPD+MQ +LAGELDVG TAS Sbjct: 29 SAQEVVRVGNLKLAHFAGVSYVKEIAKTCGLTVDLKIFAKGPDIMQAMLAGELDVGATAS 88 Query: 88 EAAISGRANGAPIYVVAGFAKGGARLVAGKDSGIKSVKDLKGKKVGVTRGGIHEVLLDAE 147 EAAIS R NGA +++V GFAKGGARL+A +SGIKS DLKGKKVGVTRG I EVLL AE Sbjct: 89 EAAISARGNGAQVFIVGGFAKGGARLLATPESGIKSAADLKGKKVGVTRGSIQEVLLGAE 148 Query: 148 LGQNGLSAKDVTIVYLAFADLNQALLGKNIDAMMQSEPQSSQAINKGFGVEVMKPYDTPI 207 + ++GL A+DV ++YL + DLNQALL K +DA+MQ+EPQS+QAI +GFGVEV+KPYDTP+ Sbjct: 149 MAKHGLKARDVNLIYLGYPDLNQALLQKQVDAIMQTEPQSAQAIARGFGVEVIKPYDTPV 208 Query: 208 GEPYRTMVMTEKFYTEKRPLAEKFMRCFLEATKTFIDKPEVAEKYVREVIFKNQISKEDF 267 G P RT+VMTEKFY EK+P+A KFM CF++A KTF+D P+ AE +V + +FK Q++ +F Sbjct: 209 GSPIRTLVMTEKFYGEKKPVAAKFMECFVKAQKTFMDDPKAAETFVTQDVFKGQVTAAEF 268 Query: 268 YDAIGNSPYAYDITAEHIQVTTDTMAKYGTGKMAKPPVAKDWVKTDLLEQAKKS 321 +A+ NSPY +++A+HIQ TTD MA++G GKM+KP A DWVK DLLE AK S Sbjct: 269 QEALANSPYTLEMSADHIQRTTDVMAEHGIGKMSKPAKAVDWVKLDLLEAAKAS 322