BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0103.p (270 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773810.1| ABC transporter permease [Herbaspirillum ser... 402 e-110 ref|YP_004754531.1| CcsA-like protein [Collimonas fungivorans Te... 356 2e-96 ref|YP_001354674.1| ABC-type transport system, permease componen... 333 2e-89 ref|YP_001101013.1| hypothetical protein HEAR2775 [Herminiimonas... 326 2e-87 ref|ZP_08272678.1| CcsA-like protein [Oxalobacteraceae bacterium... 311 9e-83 >ref|YP_003773810.1| ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ61902.1| ABC-type transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 270 Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 257/270 (95%), Positives = 262/270 (97%) Query: 1 MQTYFFILAALLYLGCAFMPSERRVPISAGIVVGWMLHGGALLSDMFAPDALRVGFAVML 60 MQTYFFILAALLYL CAFMPS+RR+PIS GIV GW+LHGGALLSDMFAPDALRVGFAVML Sbjct: 1 MQTYFFILAALLYLACAFMPSQRRMPISLGIVAGWVLHGGALLSDMFAPDALRVGFAVML 60 Query: 61 SSTLWISVAAYWLENRNFSLDSMRVLVLPVAAVAVVLPSAFPGNMVALAGKSDWFLAHIA 120 SSTLWISVAAYWLENRNFSLDSMRVLVLPVAA+AVVLPS FPGNMVAL GKSDWFLAHIA Sbjct: 61 SSTLWISVAAYWLENRNFSLDSMRVLVLPVAALAVVLPSIFPGNMVALTGKSDWFLAHIA 120 Query: 121 ISILAYSTLTIAAFHAVLMVLQESRLHTRPGPAAQSGWFGLALDRLPALLTMEKLLFRLI 180 ISILAYSTLTIAAFHAVLMVLQESRLHTRPG A QSGWFGLALDRLPALLTMEKLLFRLI Sbjct: 121 ISILAYSTLTIAAFHAVLMVLQESRLHTRPGLATQSGWFGLALDRLPALLTMEKLLFRLI 180 Query: 181 AFGFTLLTLTVLSGVVFSEQLFGTPFKWDHKTVFTMLSWLLFGLLLAGRRWQGWRGRTAL 240 AFGFTLLTLTVLSGVVFSEQLFGTP KWDHKT+FTMLSWLLFGLLLAGRRWQGWRGRTAL Sbjct: 181 AFGFTLLTLTVLSGVVFSEQLFGTPLKWDHKTIFTMLSWLLFGLLLAGRRWQGWRGRTAL 240 Query: 241 SFTLAGFAILLLAYVGSRFVLEVVLHRVLT 270 SFTLAGFAILLLAYVGSRFVLEVVLHRVLT Sbjct: 241 SFTLAGFAILLLAYVGSRFVLEVVLHRVLT 270 >ref|YP_004754531.1| CcsA-like protein [Collimonas fungivorans Ter331] gb|AEK63708.1| CcsA-like protein [Collimonas fungivorans Ter331] Length = 269 Score = 356 bits (913), Expect = 2e-96, Method: Composition-based stats. Identities = 213/269 (79%), Positives = 237/269 (88%), Gaps = 1/269 (0%) Query: 1 MQTYFFILAALLYLGCAFMPSERRVPISAGIVVGWMLHGGALLSDMFAPDALRVGFAVML 60 MQTY F+L ALLY+GC F+PS RR IS + V W+LHGG L SD+ P+ LRVGF++ML Sbjct: 1 MQTYLFVLVALLYIGCTFLPSSRRQTISIVVAVAWVLHGGVLWSDVVGPEQLRVGFSMML 60 Query: 61 SSTLWISVAAYWLENRNFSLDSMRVLVLPVAAVAVVLPSAFPGNMVALAGKSDWFLAHIA 120 S+TLW+SVAAYWLENRN++LD +RVLVLP+AA+A +LP+ FPGNMV L GKS FL HI Sbjct: 61 SATLWVSVAAYWLENRNYTLDGLRVLVLPMAALAAILPAIFPGNMVPLNGKSPVFLWHIV 120 Query: 121 ISILAYSTLTIAAFHAVLMVLQESRLHTRPGPAAQSGWFGLALDRLPALLTMEKLLFRLI 180 ISILAYSTLTIAAFHAVLMVLQESRLHTRPG A++GWFG+ALDRLPALLTMEKLLFRLI Sbjct: 121 ISILAYSTLTIAAFHAVLMVLQESRLHTRPG-VAKAGWFGVALDRLPALLTMEKLLFRLI 179 Query: 181 AFGFTLLTLTVLSGVVFSEQLFGTPFKWDHKTVFTMLSWLLFGLLLAGRRWQGWRGRTAL 240 AFGF LLTLTVLSGVVFSE+LF FKWDHKT+FTMLSW LFGLLLAGRRWQGWRGRTAL Sbjct: 180 AFGFFLLTLTVLSGVVFSEELFNKAFKWDHKTIFTMLSWALFGLLLAGRRWQGWRGRTAL 239 Query: 241 SFTLAGFAILLLAYVGSRFVLEVVLHRVL 269 SFTL GFA+LLLAYVGSRFVLEVVLHRVL Sbjct: 240 SFTLTGFAVLLLAYVGSRFVLEVVLHRVL 268 >ref|YP_001354674.1| ABC-type transport system, permease component [Janthinobacterium sp. Marseille] gb|ABR90038.1| ABC-type transport system, permease component [Janthinobacterium sp. Marseille] Length = 269 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 192/269 (71%), Positives = 223/269 (82%), Gaps = 1/269 (0%) Query: 1 MQTYFFILAALLYLGCAFMPSERRVPISAGIVVGWMLHGGALLSDMFAPDALRVGFAVML 60 M TYFF+LAAL Y CAF+P+++R IS G ++GW+LHG AL D+ ALR+GFA+ML Sbjct: 1 MYTYFFVLAALFYAACAFLPAKQRTAISTGTLIGWLLHGAALWVDVIGHGALRMGFAIML 60 Query: 61 SSTLWISVAAYWLENRNFSLDSMRVLVLPVAAVAVVLPSAFPGNMVALAGKSDWFLAHIA 120 S LWISVA YWLENRNFSLD +R+LVLP AAV V+LP+ FPG+M+ L GKS F HIA Sbjct: 61 SGALWISVAVYWLENRNFSLDGLRILVLPCAAVGVLLPTVFPGSMIPLDGKSALFPWHIA 120 Query: 121 ISILAYSTLTIAAFHAVLMVLQESRLHTRPGPAAQSGWFGLALDRLPALLTMEKLLFRLI 180 I++LAYSTLTIAAFHAVLM LQES+LHTR ++GWF LA+DRLPALLTMEKLLFRLI Sbjct: 121 IAMLAYSTLTIAAFHAVLMALQESKLHTRLS-VQKTGWFALAIDRLPALLTMEKLLFRLI 179 Query: 181 AFGFTLLTLTVLSGVVFSEQLFGTPFKWDHKTVFTMLSWLLFGLLLAGRRWQGWRGRTAL 240 GF LLTLTVLSGVVFSE+LFG FKW+HKT+FTMLSW+LFG+LLAGRRW+GWRG+TAL Sbjct: 180 GIGFFLLTLTVLSGVVFSEELFGKAFKWEHKTIFTMLSWILFGVLLAGRRWRGWRGKTAL 239 Query: 241 SFTLAGFAILLLAYVGSRFVLEVVLHRVL 269 SFTL GF L LAYVGSRFV EV+LHR L Sbjct: 240 SFTLTGFTTLFLAYVGSRFVFEVILHRSL 268 >ref|YP_001101013.1| hypothetical protein HEAR2775 [Herminiimonas arsenicoxydans] emb|CAL62892.1| Putative cytochrome c assembly protein [Herminiimonas arsenicoxydans] Length = 269 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 197/267 (73%), Positives = 227/267 (85%), Gaps = 1/267 (0%) Query: 1 MQTYFFILAALLYLGCAFMPSERRVPISAGIVVGWMLHGGALLSDMFAPDALRVGFAVML 60 M TY F+LAA Y CA +PS+ R+ IS G + GW+LHGGAL D+ +LR+GFA+ML Sbjct: 1 MYTYLFVLAAFCYAVCACLPSKNRMAISLGTLFGWLLHGGALWVDVVTSGSLRMGFAIML 60 Query: 61 SSTLWISVAAYWLENRNFSLDSMRVLVLPVAAVAVVLPSAFPGNMVALAGKSDWFLAHIA 120 S+TLWISVAAYWLENRNFSLD +R+LVLP AAV+V+LP+ FPGN++ L GKS F HIA Sbjct: 61 SATLWISVAAYWLENRNFSLDGLRILVLPCAAVSVLLPTVFPGNLIPLDGKSALFPWHIA 120 Query: 121 ISILAYSTLTIAAFHAVLMVLQESRLHTRPGPAAQSGWFGLALDRLPALLTMEKLLFRLI 180 I++LAYSTLTIAAFHAVLM LQES+LHTR A ++GWF LALDRLPALLTMEKLLFRLI Sbjct: 121 IAMLAYSTLTIAAFHAVLMALQESKLHTRQS-AQKAGWFALALDRLPALLTMEKLLFRLI 179 Query: 181 AFGFTLLTLTVLSGVVFSEQLFGTPFKWDHKTVFTMLSWLLFGLLLAGRRWQGWRGRTAL 240 FGF LLTLTVLSGVVFSE+LFG FKW+HKT+FTMLSWLLFG+LLAGR+W+GWRG+TAL Sbjct: 180 GFGFFLLTLTVLSGVVFSEELFGKAFKWEHKTIFTMLSWLLFGILLAGRKWRGWRGKTAL 239 Query: 241 SFTLAGFAILLLAYVGSRFVLEVVLHR 267 SFTL GF LLLAYVGSRFVLEVVLHR Sbjct: 240 SFTLTGFTTLLLAYVGSRFVLEVVLHR 266 >ref|ZP_08272678.1| CcsA-like protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF33856.1| CcsA-like protein [Oxalobacteraceae bacterium IMCC9480] Length = 272 Score = 311 bits (796), Expect = 9e-83, Method: Composition-based stats. Identities = 184/272 (67%), Positives = 217/272 (79%), Gaps = 2/272 (0%) Query: 1 MQTYFFILAALLYLGCAFMPSERRVPISAGIVVGWMLHGGALLSDMFAPDALRVGFAVML 60 MQ Y FI AALLY CAF+P+ R+PIS G+ + W LHG L SD+ D+LR+GFA ML Sbjct: 1 MQNYSFIAAALLYASCAFLPARWRLPISGGVALAWALHGLGLWSDVVVQDSLRLGFAQML 60 Query: 61 SSTLWISVAAYWLENRNFSLDSMRVLVLPVAAVAVVLPSAFPGNMVALAGKSDWFLAHIA 120 S+ LWISVA YW+ENRN +LDSMRVL+LPVAAVAV+LP FPGN+VAL GK+ F H+A Sbjct: 61 SAALWISVAVYWVENRNMALDSMRVLMLPVAAVAVLLPIVFPGNVVALDGKTALFPWHVA 120 Query: 121 ISILAYSTLTIAAFHAVLMVLQESRLHTRPG--PAAQSGWFGLALDRLPALLTMEKLLFR 178 +++LAYSTLT AAFHAVLM +QES LH + GW+ A+ RLPALLTMEK+LFR Sbjct: 121 VAMLAYSTLTTAAFHAVLMAVQESHLHAHRALLNERKGGWYASAIARLPALLTMEKMLFR 180 Query: 179 LIAFGFTLLTLTVLSGVVFSEQLFGTPFKWDHKTVFTMLSWLLFGLLLAGRRWQGWRGRT 238 LIA GF LLTLTVLSG++FSEQLFG WDHKT+FT+LSW+LFG+LLAGR W+GWRG+T Sbjct: 181 LIAIGFGLLTLTVLSGLLFSEQLFGKALTWDHKTIFTLLSWVLFGVLLAGRHWRGWRGKT 240 Query: 239 ALSFTLAGFAILLLAYVGSRFVLEVVLHRVLT 270 AL+FTL GF LLLAYVGSRFVLEVVLHR LT Sbjct: 241 ALTFTLTGFVTLLLAYVGSRFVLEVVLHRGLT 272