BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0083.p         (89 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773527.1| phosphocarrier protein HPr [Herbaspirillum s...   152   1e-35
ref|YP_001098512.1| putative phosphotransferase system, phosphoc...   135   1e-30
ref|ZP_08275247.1| Phosphocarrier protein, nitrogen regulation a...   131   3e-29
ref|YP_001351864.1| sugar transport PTS system phosphocarrier pr...   130   6e-29
ref|YP_004754800.1| phosphocarrier protein, nitrogen regulation ...   129   1e-28

>ref|YP_003773527.1| phosphocarrier protein HPr [Herbaspirillum seropedicae SmR1]
 gb|ADJ61619.1| phosphocarrier protein HPr (Histidine-containing protein) protein
          [Herbaspirillum seropedicae SmR1]
          Length = 89

 Score =  152 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 87/89 (97%), Positives = 89/89 (100%)

Query: 1  MIQKELEIVNKLGLHARASAKLTQLAGKFKSEVWLTFNKRRVNAKSIMGVMMLAAGKGSI 60
          MIQKELEIVNKLGLHARASAKLTQLAGKFKSEVW+TFNKRRVNAKSIMGVMMLAAGKGSI
Sbjct: 1  MIQKELEIVNKLGLHARASAKLTQLAGKFKSEVWMTFNKRRVNAKSIMGVMMLAAGKGSI 60

Query: 61 VTLETNGADEQECFTALEALIADKFGEGQ 89
          VTLETNGADEQECF+ALEALIADKFGEGQ
Sbjct: 61 VTLETNGADEQECFSALEALIADKFGEGQ 89


>ref|YP_001098512.1| putative phosphotransferase system, phosphocarrier HPr protein
          [Herminiimonas arsenicoxydans]
 emb|CAL60383.1| Phosphocarrier protein HPr (Histidine-containing protein)
          (Protein H) [Herminiimonas arsenicoxydans]
          Length = 89

 Score =  135 bits (341), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 74/89 (83%), Positives = 82/89 (92%)

Query: 1  MIQKELEIVNKLGLHARASAKLTQLAGKFKSEVWLTFNKRRVNAKSIMGVMMLAAGKGSI 60
          MI++E+EI+NKLGLHARASAKLTQLA K+KSEVW+T NKRRVNAKSIMGVMMLAAGKGS 
Sbjct: 1  MIEQEIEIINKLGLHARASAKLTQLAAKYKSEVWMTRNKRRVNAKSIMGVMMLAAGKGSK 60

Query: 61 VTLETNGADEQECFTALEALIADKFGEGQ 89
          VTLETNG DE+ECF ALE LI DKFGEG+
Sbjct: 61 VTLETNGPDERECFDALELLIQDKFGEGE 89


>ref|ZP_08275247.1| Phosphocarrier protein, nitrogen regulation associated
          [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF31283.1| Phosphocarrier protein, nitrogen regulation associated
          [Oxalobacteraceae bacterium IMCC9480]
          Length = 89

 Score =  131 bits (330), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 73/89 (82%), Positives = 81/89 (91%)

Query: 1  MIQKELEIVNKLGLHARASAKLTQLAGKFKSEVWLTFNKRRVNAKSIMGVMMLAAGKGSI 60
          MIQ+ELEI+NKLGLHARASAKLTQLA KF+SEVWLT NKRRVNAKSIMGVMMLAAGKG+ 
Sbjct: 1  MIQQELEIINKLGLHARASAKLTQLAAKFQSEVWLTRNKRRVNAKSIMGVMMLAAGKGTK 60

Query: 61 VTLETNGADEQECFTALEALIADKFGEGQ 89
          V LET+G DEQ CFTAL+ LI +KFGEG+
Sbjct: 61 VLLETDGPDEQACFTALQELIDNKFGEGE 89


>ref|YP_001351864.1| sugar transport PTS system phosphocarrier protein HPr
          [Janthinobacterium sp. Marseille]
 gb|ABR91646.1| sugar transport PTS system phosphocarrier protein HPR
          [Janthinobacterium sp. Marseille]
          Length = 89

 Score =  130 bits (327), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 71/89 (79%), Positives = 82/89 (92%)

Query: 1  MIQKELEIVNKLGLHARASAKLTQLAGKFKSEVWLTFNKRRVNAKSIMGVMMLAAGKGSI 60
          MI++E+EI+NKLGLHARASAKLTQLA K+KSEVW+T NKRRVNAKSIMGVMMLAAGKG+ 
Sbjct: 1  MIEQEIEIINKLGLHARASAKLTQLAAKYKSEVWMTRNKRRVNAKSIMGVMMLAAGKGAK 60

Query: 61 VTLETNGADEQECFTALEALIADKFGEGQ 89
          VTLET+G DE+ECF ALE LI +KFGEG+
Sbjct: 61 VTLETDGPDEKECFDALELLIQNKFGEGE 89


>ref|YP_004754800.1| phosphocarrier protein, nitrogen regulation associated [Collimonas
           fungivorans Ter331]
 gb|AEK63977.1| Phosphocarrier protein, nitrogen regulation associated [Collimonas
           fungivorans Ter331]
          Length = 106

 Score =  129 bits (324), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 69/89 (77%), Positives = 76/89 (85%)

Query: 1   MIQKELEIVNKLGLHARASAKLTQLAGKFKSEVWLTFNKRRVNAKSIMGVMMLAAGKGSI 60
           MIQ+E+EI+NKLGLHARASAK TQLA KFKSEVW+T NKRRVNAKSIMGVMMLAAGKGS 
Sbjct: 18  MIQQEIEIINKLGLHARASAKFTQLASKFKSEVWMTRNKRRVNAKSIMGVMMLAAGKGST 77

Query: 61  VTLETNGADEQECFTALEALIADKFGEGQ 89
           + LE  G DE+ CF AL  LI DKFGEG+
Sbjct: 78  ILLEAEGEDEKTCFDALYQLIQDKFGEGE 106