BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0079.p (511 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773523.1| ammonium transporter transmembrane protein [... 758 0.0 ref|YP_004754805.1| ammonium transporter [Collimonas fungivorans... 654 0.0 ref|YP_002980198.1| ammonium transporter [Ralstonia pickettii 12... 635 e-180 emb|CCA88659.1| ammonium transport protein (Amt family) [Ralston... 632 e-179 emb|CCA80491.1| ammonium transport protein (Amt family) [blood d... 632 e-179 >ref|YP_003773523.1| ammonium transporter transmembrane protein [Herbaspirillum seropedicae SmR1] gb|AAZ43076.1| AmtB precursor [Herbaspirillum seropedicae SmR1] gb|ADJ61615.1| ammonium transporter transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 510 Score = 758 bits (1957), Expect = 0.0, Method: Composition-based stats. Identities = 486/511 (95%), Positives = 489/511 (95%), Gaps = 1/511 (0%) Query: 1 MSMKKMFSGALAIGALLLAVGFTAPAQAQDAPKPEAAAAAAAAPAAAAPAAPKADAAAPA 60 MSMKKMFSGALAIGALL AV FTAPAQAQDAPKPEAAAAAAAAPAAA A AA A Sbjct: 1 MSMKKMFSGALAIGALLFAVSFTAPAQAQDAPKPEAAAAAAAAPAAAPAAPKAEAAAPAA 60 Query: 61 AAAPAAPAAAAAAPAPVPNKGDTAWMLVCTAFVILMTLPGLGLFYGGLVRSKNMLSVLMQ 120 AA A AAAAA VPNKGDTAWMLVCTAFVILMTLPGLGLFYGGLVRSKNMLSVLMQ Sbjct: 61 AAPAAPAAAAAAPAP-VPNKGDTAWMLVCTAFVILMTLPGLGLFYGGLVRSKNMLSVLMQ 119 Query: 121 CFMIFSLIYILWFVYGYSIAFTEGSAFFGGFDRLFLHGLTGDSNTATFSKGVVIPELVFV 180 CFMIFSLIYILWFVYGYSIAFTEG+AFFGGFDRLFLHGLTGDSNT TFSKGVVIPELVFV Sbjct: 120 CFMIFSLIYILWFVYGYSIAFTEGNAFFGGFDRLFLHGLTGDSNTGTFSKGVVIPELVFV 179 Query: 181 AFQGAFAAITVALIIGAFAERVKFSAVILFSILWFTFSYLPMAHMVWFWPGPDAFTDTAA 240 AFQGAFAAITVALIIGAFAERVKFSAVILFSILWFTFSYLPMAHMVWFWPGPDAFTD AA Sbjct: 180 AFQGAFAAITVALIIGAFAERVKFSAVILFSILWFTFSYLPMAHMVWFWPGPDAFTDAAA 239 Query: 241 AEKATAISGWLFQKGALDYAGGTVVHINAAIAGLVGSYVIGKRIGFGKEAFKPHSLTLTM 300 EKATAISGWLFQKGALDYAGGTVVHINAAIAGLVGSYVIGKRIGFGKEAFKPHSLTLTM Sbjct: 240 GEKATAISGWLFQKGALDYAGGTVVHINAAIAGLVGSYVIGKRIGFGKEAFKPHSLTLTM 299 Query: 301 VGASLLWFGWFGFNAGSGLEANGTAALAFVNTILATAAAVLSWSFGEWIGKGKPSMLGAA 360 VGASLLWFGWFGFNAGSGLEANGTAALAFVNTILATAAAVLSWSFGEWIGKGKPSMLGAA Sbjct: 300 VGASLLWFGWFGFNAGSGLEANGTAALAFVNTILATAAAVLSWSFGEWIGKGKPSMLGAA 359 Query: 361 SGAVAGLVAITPAAGFVGVIGAVVMGLLAGLLCLWGVSGLKKILGSDDALDVFGVHGVGG 420 SGAVAGLVAITPAAGFVGVIGAVVMGL+AGLLCLWGVSGLKKILGSDDALDVFGVHGVGG Sbjct: 360 SGAVAGLVAITPAAGFVGVIGAVVMGLIAGLLCLWGVSGLKKILGSDDALDVFGVHGVGG 419 Query: 421 ILGAILTGVFAAPSLGGTGIYDYVANAVAPDYSIGGQVWIQFQGVLTTVILSGVVSFIAY 480 ILGAILTGVFAAPSLGGTGIYDYVANAVAPDYSIGGQVWIQFQGVLTTV+LSGVVSFIAY Sbjct: 420 ILGAILTGVFAAPSLGGTGIYDYVANAVAPDYSIGGQVWIQFQGVLTTVVLSGVVSFIAY 479 Query: 481 KIVDVVIGLRVTEEEEREGLDISSHGESAYH 511 KIVDVVIGLRVTEEEEREGLDISSHGESAYH Sbjct: 480 KIVDVVIGLRVTEEEEREGLDISSHGESAYH 510 >ref|YP_004754805.1| ammonium transporter [Collimonas fungivorans Ter331] gb|AEK63982.1| Ammonium transporter [Collimonas fungivorans Ter331] Length = 495 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 369/433 (85%), Positives = 406/433 (93%) Query: 79 NKGDTAWMLVCTAFVILMTLPGLGLFYGGLVRSKNMLSVLMQCFMIFSLIYILWFVYGYS 138 NKGDTAW+LVCTAFVILMTLPGLGLFYGGLVRSKNMLSVLMQCF +FSLI +LW +YGYS Sbjct: 62 NKGDTAWLLVCTAFVILMTLPGLGLFYGGLVRSKNMLSVLMQCFTVFSLIIVLWILYGYS 121 Query: 139 IAFTEGSAFFGGFDRLFLHGLTGDSNTATFSKGVVIPELVFVAFQGAFAAITVALIIGAF 198 IAFTEG+AFFGGF RLFLHG+T DS ATFSKGVV+PE +V FQGAFAAIT ALIIGAF Sbjct: 122 IAFTEGNAFFGGFSRLFLHGMTPDSAAATFSKGVVVPEFAYVVFQGAFAAITCALIIGAF 181 Query: 199 AERVKFSAVILFSILWFTFSYLPMAHMVWFWPGPDAFTDTAAAEKATAISGWLFQKGALD 258 AER KFSA+++F++LWFTF+YLPMAHMVWFWPGPD FTD AAAEK TA GWLFQKGALD Sbjct: 182 AERAKFSAILVFTVLWFTFAYLPMAHMVWFWPGPDGFTDAAAAEKLTATGGWLFQKGALD 241 Query: 259 YAGGTVVHINAAIAGLVGSYVIGKRIGFGKEAFKPHSLTLTMVGASLLWFGWFGFNAGSG 318 +AGGTVVHINAAIAGLVGSYVIGKR+GFGKEAFKPHSLTLTMVGASLLWFGWFGFNAGS Sbjct: 242 FAGGTVVHINAAIAGLVGSYVIGKRVGFGKEAFKPHSLTLTMVGASLLWFGWFGFNAGSA 301 Query: 319 LEANGTAALAFVNTILATAAAVLSWSFGEWIGKGKPSMLGAASGAVAGLVAITPAAGFVG 378 LEANG+AALAF+NT+LATAAAVLSWS GEWIGKGKPSMLG ASGAVAGLVAITPAAGFVG Sbjct: 302 LEANGSAALAFINTLLATAAAVLSWSAGEWIGKGKPSMLGGASGAVAGLVAITPAAGFVG 361 Query: 379 VIGAVVMGLLAGLLCLWGVSGLKKILGSDDALDVFGVHGVGGILGAILTGVFAAPSLGGT 438 +GA++MGLLAG +CLWGV+GLK++LG+DDALDVFGVHGVGGI+GA+LTGVFAAPSLGGT Sbjct: 362 PMGALIMGLLAGFVCLWGVTGLKRLLGADDALDVFGVHGVGGIMGALLTGVFAAPSLGGT 421 Query: 439 GIYDYVANAVAPDYSIGGQVWIQFQGVLTTVILSGVVSFIAYKIVDVVIGLRVTEEEERE 498 GIYDYV NAV PDYSI GQ+WIQF+GVLTT++ SGVVS IA+K+VD+V+GLRVTEEEERE Sbjct: 422 GIYDYVTNAVLPDYSIPGQLWIQFEGVLTTLVWSGVVSLIAFKLVDIVMGLRVTEEEERE 481 Query: 499 GLDISSHGESAYH 511 GLDISSHGESAYH Sbjct: 482 GLDISSHGESAYH 494 >ref|YP_002980198.1| ammonium transporter [Ralstonia pickettii 12D] gb|ACS61526.1| ammonium transporter [Ralstonia pickettii 12D] Length = 524 Score = 635 bits (1637), Expect = e-180, Method: Composition-based stats. Identities = 361/435 (82%), Positives = 394/435 (90%) Query: 76 PVPNKGDTAWMLVCTAFVILMTLPGLGLFYGGLVRSKNMLSVLMQCFMIFSLIYILWFVY 135 PVPNKGDTAW+LV TAFVILMTLPGL LFYGGLVR KNMLSVLMQC IFSLI ILW +Y Sbjct: 88 PVPNKGDTAWLLVSTAFVILMTLPGLALFYGGLVRKKNMLSVLMQCTGIFSLIIILWAIY 147 Query: 136 GYSIAFTEGSAFFGGFDRLFLHGLTGDSNTATFSKGVVIPELVFVAFQGAFAAITVALII 195 GYS AFTEG+AFFGG DRLFL GLT DS ATFSKGVV+PE + AFQGAFAAIT ALII Sbjct: 148 GYSFAFTEGNAFFGGLDRLFLKGLTPDSVAATFSKGVVVPEYAYFAFQGAFAAITCALII 207 Query: 196 GAFAERVKFSAVILFSILWFTFSYLPMAHMVWFWPGPDAFTDTAAAEKATAISGWLFQKG 255 GAFAER KFSAV+LF +LWFTFSYLP+AHMVWFWPGPD FTD AAE TA SGWLFQKG Sbjct: 208 GAFAERAKFSAVLLFVVLWFTFSYLPIAHMVWFWPGPDGFTDAKAAEVMTAKSGWLFQKG 267 Query: 256 ALDYAGGTVVHINAAIAGLVGSYVIGKRIGFGKEAFKPHSLTLTMVGASLLWFGWFGFNA 315 ALD+AGGTVVHINAA+AGLVG+++ GKRIGFG+EA KPHSLTLTMVGASLLWFGWFGFNA Sbjct: 268 ALDFAGGTVVHINAAVAGLVGAFLFGKRIGFGREALKPHSLTLTMVGASLLWFGWFGFNA 327 Query: 316 GSGLEANGTAALAFVNTILATAAAVLSWSFGEWIGKGKPSMLGAASGAVAGLVAITPAAG 375 GS LEANG+AALAFVNT+LATAAAVLSWSFGEW GK KPSMLGAASGAVAGLVAITPAAG Sbjct: 328 GSALEANGSAALAFVNTLLATAAAVLSWSFGEWFGKSKPSMLGAASGAVAGLVAITPAAG 387 Query: 376 FVGVIGAVVMGLLAGLLCLWGVSGLKKILGSDDALDVFGVHGVGGILGAILTGVFAAPSL 435 FVG +G++ +G++AGLLCLWGV+GLK++LG DD LDVFGVHGVGGILGA+LTGVFAAPSL Sbjct: 388 FVGPMGSIALGIIAGLLCLWGVNGLKRMLGMDDTLDVFGVHGVGGILGALLTGVFAAPSL 447 Query: 436 GGTGIYDYVANAVAPDYSIGGQVWIQFQGVLTTVILSGVVSFIAYKIVDVVIGLRVTEEE 495 GGTGIYDYVAN VA DYSIGGQ+WIQFQGV TTVI S VV+FI+YKIVD ++GLRV EEE Sbjct: 448 GGTGIYDYVANKVADDYSIGGQLWIQFQGVATTVIWSAVVAFISYKIVDAIVGLRVPEEE 507 Query: 496 EREGLDISSHGESAY 510 EREGLDI+SHGE+AY Sbjct: 508 EREGLDITSHGETAY 522 >emb|CCA88659.1| ammonium transport protein (Amt family) [Ralstonia syzygii R24] Length = 513 Score = 632 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 391/488 (80%), Positives = 429/488 (87%) Query: 23 TAPAQAQDAPKPEAAAAAAAAPAAAAPAAPKADAAAPAAAAPAAPAAAAAAPAPVPNKGD 82 +APA AQD P A AA A+APAAAA A+ AAAPAAAA A A+A AA PVPNKGD Sbjct: 24 SAPAMAQDKPAASAPAAEASAPAAAAAASEPVAAAAPAAAAAPAAASAPAAATPVPNKGD 83 Query: 83 TAWMLVCTAFVILMTLPGLGLFYGGLVRSKNMLSVLMQCFMIFSLIYILWFVYGYSIAFT 142 TAW+LV TAFVILMTLPGL LFYGGLVR KNMLSVLMQC IFSL+ ILW +YGYSIAFT Sbjct: 84 TAWLLVSTAFVILMTLPGLALFYGGLVRKKNMLSVLMQCTGIFSLVMILWAIYGYSIAFT 143 Query: 143 EGSAFFGGFDRLFLHGLTGDSNTATFSKGVVIPELVFVAFQGAFAAITVALIIGAFAERV 202 EG+AFFGG DRLFL GLT DS ATFSKGVV+PE + AFQGAFAAIT ALIIGAFAER Sbjct: 144 EGNAFFGGLDRLFLKGLTPDSVAATFSKGVVVPEYAYFAFQGAFAAITCALIIGAFAERA 203 Query: 203 KFSAVILFSILWFTFSYLPMAHMVWFWPGPDAFTDTAAAEKATAISGWLFQKGALDYAGG 262 KFSAV++F +LWFTF+YLP+AHMVWFWPGPD FTD AAE TA GWLFQKGALD+AGG Sbjct: 204 KFSAVLVFVVLWFTFAYLPIAHMVWFWPGPDGFTDAKAAEVMTAKGGWLFQKGALDFAGG 263 Query: 263 TVVHINAAIAGLVGSYVIGKRIGFGKEAFKPHSLTLTMVGASLLWFGWFGFNAGSGLEAN 322 TVVHINAA+AGLVG+++ GKRIGFG+EA KPHSLTLTMVGASLLWFGWFGFNAGS LEAN Sbjct: 264 TVVHINAAVAGLVGAFLFGKRIGFGREALKPHSLTLTMVGASLLWFGWFGFNAGSALEAN 323 Query: 323 GTAALAFVNTILATAAAVLSWSFGEWIGKGKPSMLGAASGAVAGLVAITPAAGFVGVIGA 382 G+AALAFVNT+LATAAAVLSWSFGEWIGK KPSMLGAASGAVAGLVAITPAAGFVG +GA Sbjct: 324 GSAALAFVNTLLATAAAVLSWSFGEWIGKSKPSMLGAASGAVAGLVAITPAAGFVGPMGA 383 Query: 383 VVMGLLAGLLCLWGVSGLKKILGSDDALDVFGVHGVGGILGAILTGVFAAPSLGGTGIYD 442 + +G+LAGLLCLWGV+GLK++LG DD LDVFGVHGVGGILGA+LTGVFA+PSLGGTGIYD Sbjct: 384 IALGILAGLLCLWGVNGLKRMLGMDDTLDVFGVHGVGGILGALLTGVFASPSLGGTGIYD 443 Query: 443 YVANAVAPDYSIGGQVWIQFQGVLTTVILSGVVSFIAYKIVDVVIGLRVTEEEEREGLDI 502 YVAN VA YSIGGQ+WIQ QGVLTT++ S VV+FIAYKIVD VIGLRV EEEEREGLDI Sbjct: 444 YVANKVADGYSIGGQLWIQLQGVLTTIVWSAVVAFIAYKIVDAVIGLRVPEEEEREGLDI 503 Query: 503 SSHGESAY 510 +SHGE+AY Sbjct: 504 TSHGETAY 511 >emb|CCA80491.1| ammonium transport protein (Amt family) [blood disease bacterium R229] Length = 513 Score = 632 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 391/488 (80%), Positives = 429/488 (87%) Query: 23 TAPAQAQDAPKPEAAAAAAAAPAAAAPAAPKADAAAPAAAAPAAPAAAAAAPAPVPNKGD 82 +APA AQD P A AA A+APAAAA AA A A+A AAAA A A+A AA PVPNKGD Sbjct: 24 SAPAMAQDKPAASAPAAEASAPAAAAAAAESAAASASAAAAAPAAASAPAAATPVPNKGD 83 Query: 83 TAWMLVCTAFVILMTLPGLGLFYGGLVRSKNMLSVLMQCFMIFSLIYILWFVYGYSIAFT 142 TAW+LV TAFVILMTLPGL LFYGGLVR KNMLSVLMQC IFSL+ ILW +YGYSIAFT Sbjct: 84 TAWLLVSTAFVILMTLPGLALFYGGLVRKKNMLSVLMQCTGIFSLVMILWAIYGYSIAFT 143 Query: 143 EGSAFFGGFDRLFLHGLTGDSNTATFSKGVVIPELVFVAFQGAFAAITVALIIGAFAERV 202 EG+AFFGG DRLFL GLT DS ATFSKGVV+PE + AFQGAFAAIT ALIIGAFAER Sbjct: 144 EGNAFFGGLDRLFLKGLTPDSVAATFSKGVVVPEYAYFAFQGAFAAITCALIIGAFAERA 203 Query: 203 KFSAVILFSILWFTFSYLPMAHMVWFWPGPDAFTDTAAAEKATAISGWLFQKGALDYAGG 262 KFSAV++F +LWFTF+YLP+AHMVWFWPGPD FTD AAE TA GWLFQKGALD+AGG Sbjct: 204 KFSAVLVFVVLWFTFAYLPIAHMVWFWPGPDGFTDAKAAEVMTAKGGWLFQKGALDFAGG 263 Query: 263 TVVHINAAIAGLVGSYVIGKRIGFGKEAFKPHSLTLTMVGASLLWFGWFGFNAGSGLEAN 322 TVVHINAA+AGLVG+++ GKRIGFG+EA KPHSLTLTMVGASLLWFGWFGFNAGS LEAN Sbjct: 264 TVVHINAAVAGLVGAFLFGKRIGFGREALKPHSLTLTMVGASLLWFGWFGFNAGSALEAN 323 Query: 323 GTAALAFVNTILATAAAVLSWSFGEWIGKGKPSMLGAASGAVAGLVAITPAAGFVGVIGA 382 G+AALAFVNT+LATAAAVLSWSFGEWIGK KPSMLGAASGAVAGLVAITPAAGFVG +GA Sbjct: 324 GSAALAFVNTLLATAAAVLSWSFGEWIGKSKPSMLGAASGAVAGLVAITPAAGFVGPMGA 383 Query: 383 VVMGLLAGLLCLWGVSGLKKILGSDDALDVFGVHGVGGILGAILTGVFAAPSLGGTGIYD 442 + +G+LAGLLCLWGV+GLK++LG DD LDVFGVHGVGGILGA+LTGVFA+PSLGGTGIYD Sbjct: 384 IALGILAGLLCLWGVNGLKRMLGMDDTLDVFGVHGVGGILGALLTGVFASPSLGGTGIYD 443 Query: 443 YVANAVAPDYSIGGQVWIQFQGVLTTVILSGVVSFIAYKIVDVVIGLRVTEEEEREGLDI 502 YVAN VA YSIGGQ+WIQ QGVLTT++ S VV+FIAYKIVD VIGLRV EEEEREGLDI Sbjct: 444 YVANKVADGYSIGGQLWIQLQGVLTTIVWSAVVAFIAYKIVDAVIGLRVPEEEEREGLDI 503 Query: 503 SSHGESAY 510 +SHGE+AY Sbjct: 504 TSHGETAY 511