BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0076.p         (173 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773520.1| hypothetical protein Hsero_0082 [Herbaspiril...   144   5e-33
ref|YP_004754809.1| hypothetical protein CFU_4164 [Collimonas fu...   130   5e-29
ref|YP_001351857.1| hypothetical protein mma_0167 [Janthinobacte...   118   3e-25
ref|ZP_08275435.1| hypothetical protein IMCC9480_367 [Oxalobacte...   116   1e-24
ref|YP_001098505.1| hypothetical protein HEAR0141 [Herminiimonas...   116   1e-24

>ref|YP_003773520.1| hypothetical protein Hsero_0082 [Herbaspirillum seropedicae SmR1]
 gb|ADJ61612.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 81

 Score =  144 bits (363), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 80/81 (98%), Positives = 81/81 (100%)

Query: 93  MDKPPFFEDLQSKINKAIENSPAKDIEKNVKAMLSQGFAKLDLVTREEFDVQAQVLAKTR 152
           MDKPPFFEDLQSKINKAIENSPAKDIEKNVKAMLSQGFAKLDLVTREEFD+QAQVLAKTR
Sbjct: 1   MDKPPFFEDLQSKINKAIENSPAKDIEKNVKAMLSQGFAKLDLVTREEFDIQAQVLAKTR 60

Query: 153 ARLEALEARVAELEAQQKQTP 173
           ARLEALEARVAELEAQQKQTP
Sbjct: 61  ARLEALEARVAELEAQQKQTP 81


>ref|YP_004754809.1| hypothetical protein CFU_4164 [Collimonas fungivorans Ter331]
 gb|AEK63986.1| hypothetical protein CFU_4164 [Collimonas fungivorans Ter331]
          Length = 96

 Score =  130 bits (328), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 67/79 (84%), Positives = 74/79 (93%)

Query: 93  MDKPPFFEDLQSKINKAIENSPAKDIEKNVKAMLSQGFAKLDLVTREEFDVQAQVLAKTR 152
           M+KP FF+D+Q+KIN+AIENSPAKDIEKNVKAML QGF+KLDLVTREEFDVQAQVLA TR
Sbjct: 17  MNKPNFFDDIQAKINQAIENSPAKDIEKNVKAMLGQGFSKLDLVTREEFDVQAQVLASTR 76

Query: 153 ARLEALEARVAELEAQQKQ 171
           A+LEALEARV ELEAQ KQ
Sbjct: 77  AKLEALEARVTELEAQLKQ 95


>ref|YP_001351857.1| hypothetical protein mma_0167 [Janthinobacterium sp. Marseille]
 gb|ABR91682.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 79

 Score =  118 bits (295), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 62/79 (78%), Positives = 72/79 (91%)

Query: 93  MDKPPFFEDLQSKINKAIENSPAKDIEKNVKAMLSQGFAKLDLVTREEFDVQAQVLAKTR 152
           M+KP FF ++Q KIN+ +ENSPAKDIEKNVKAM+SQGF+KLDLVTREEFDVQAQVLA TR
Sbjct: 1   MEKPNFFNEMQDKINQVLENSPAKDIEKNVKAMMSQGFSKLDLVTREEFDVQAQVLANTR 60

Query: 153 ARLEALEARVAELEAQQKQ 171
           A+LEALEA+VA LEAQ K+
Sbjct: 61  AKLEALEAQVAALEAQLKK 79


>ref|ZP_08275435.1| hypothetical protein IMCC9480_367 [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF31100.1| hypothetical protein IMCC9480_367 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 81

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 60/76 (78%), Positives = 68/76 (89%)

Query: 93  MDKPPFFEDLQSKINKAIENSPAKDIEKNVKAMLSQGFAKLDLVTREEFDVQAQVLAKTR 152
           MDK  FF D+Q+KI++AIENSPAKDIEKNVKAM+SQGF+KLDLVTREEFD+QAQVL KTR
Sbjct: 1   MDKSNFFTDMQNKISQAIENSPAKDIEKNVKAMMSQGFSKLDLVTREEFDIQAQVLEKTR 60

Query: 153 ARLEALEARVAELEAQ 168
            RLEALE +V  LEAQ
Sbjct: 61  TRLEALELQVTALEAQ 76


>ref|YP_001098505.1| hypothetical protein HEAR0141 [Herminiimonas arsenicoxydans]
 emb|CAL60376.1| conserved hypothetical protein [Herminiimonas arsenicoxydans]
          Length = 81

 Score =  116 bits (290), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 60/79 (75%), Positives = 68/79 (86%)

Query: 93  MDKPPFFEDLQSKINKAIENSPAKDIEKNVKAMLSQGFAKLDLVTREEFDVQAQVLAKTR 152
           MDK  FF D+Q KIN+ +ENSP KDIEKNVKAM+ QGF+KLDLVTREEFD QAQVLA TR
Sbjct: 1   MDKFNFFNDMQEKINQVLENSPVKDIEKNVKAMMGQGFSKLDLVTREEFDTQAQVLATTR 60

Query: 153 ARLEALEARVAELEAQQKQ 171
           A+LEALEA+VA LEAQ K+
Sbjct: 61  AKLEALEAQVAALEAQMKK 79