BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0074.p (209 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_05137007.1| transporter, LysE family [Stenotrophomonas sp... 269 2e-70 ref|YP_001668492.1| lysine exporter protein LysE/YggA [Pseudomon... 265 3e-69 ref|YP_004702574.1| lysine exporter protein LysE/YggA [Pseudomon... 265 4e-69 gb|ADR59773.1| Lysine exporter protein LysE/YggA [Pseudomonas pu... 264 7e-69 ref|NP_745788.1| amino acid transporter LysE [Pseudomonas putida... 261 3e-68 >ref|ZP_05137007.1| transporter, LysE family [Stenotrophomonas sp. SKA14] gb|EED41068.1| transporter, LysE family [Stenotrophomonas sp. SKA14] Length = 211 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 158/210 (75%), Positives = 178/210 (84%), Gaps = 1/210 (0%) Query: 1 MPTVSTLLAFAALCLGMVLTPGPNMLYLVSRSVCQGRKAGLISLAGIALGLVFYMLCTAL 60 MP S LLAFA + LGMVLTPGPNM+YLVSRS+CQGR AGLISL G+ALG VFYMLC AL Sbjct: 1 MPATSDLLAFALISLGMVLTPGPNMIYLVSRSICQGRHAGLISLGGVALGFVFYMLCAAL 60 Query: 61 GISALLMTLPLAYDALRLAGALYLLYLAWQALKPGGRSTFALRTLPPDRPRKLFSMGLLT 120 GI+ALLMT+PLAYDALR+ GALYLLYLAWQALKPGGRS FA+R LPPD PR+LF+MG LT Sbjct: 61 GITALLMTVPLAYDALRIGGALYLLYLAWQALKPGGRSPFAVRDLPPDGPRRLFAMGFLT 120 Query: 121 SLLNPKIAVMYLSLLPQFIQPE-HGSVLLQSFALGLTQIVVGVSMNAVITLSAASISALL 179 +LLNPKIAVMYLSLLPQF+ PE HGSVL+QS LG TQI V VS+NAVI + A SI+ L Sbjct: 121 NLLNPKIAVMYLSLLPQFLHPEGHGSVLVQSLVLGFTQIAVSVSVNAVIAVMAGSIAGFL 180 Query: 180 AGRPHWQRLQRWLMGSVLAGLAVHMLIQRR 209 A RP WQ +QRWLMG+VLAGLAV M ++ R Sbjct: 181 AARPTWQAVQRWLMGTVLAGLAVRMAVEGR 210 >ref|YP_001668492.1| lysine exporter protein LysE/YggA [Pseudomonas putida GB-1] gb|ABY98156.1| Lysine exporter protein (LYSE/YGGA) [Pseudomonas putida GB-1] Length = 210 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 148/209 (70%), Positives = 175/209 (83%) Query: 1 MPTVSTLLAFAALCLGMVLTPGPNMLYLVSRSVCQGRKAGLISLAGIALGLVFYMLCTAL 60 MP ++ LL FA +CLGMVLTPGPNM+YL+SRS+CQGRKAGLISL G+ALG V YM C AL Sbjct: 1 MPDITQLLTFALICLGMVLTPGPNMIYLISRSICQGRKAGLISLGGVALGFVIYMFCAAL 60 Query: 61 GISALLMTLPLAYDALRLAGALYLLYLAWQALKPGGRSTFALRTLPPDRPRKLFSMGLLT 120 GI+AL+M +P AYDALR+ GALYLLYLAWQAL+PGGRS F +R LP D PR+LF+MG T Sbjct: 61 GITALVMAVPFAYDALRIGGALYLLYLAWQALRPGGRSPFQVRDLPADSPRRLFTMGFAT 120 Query: 121 SLLNPKIAVMYLSLLPQFIQPEHGSVLLQSFALGLTQIVVGVSMNAVITLSAASISALLA 180 SLLNPKIAVMYLSL+PQFI+P HGSVLLQS LG TQI + V++NA+I + A SI+ LA Sbjct: 121 SLLNPKIAVMYLSLMPQFIEPGHGSVLLQSLVLGSTQIAISVTVNAMIAIMAGSIAVFLA 180 Query: 181 GRPHWQRLQRWLMGSVLAGLAVHMLIQRR 209 GRP WQ++QRWLMG+VLAGLAV ML + R Sbjct: 181 GRPLWQQVQRWLMGTVLAGLAVRMLAEGR 209 >ref|YP_004702574.1| lysine exporter protein LysE/YggA [Pseudomonas putida S16] gb|AEJ13694.1| lysine exporter protein LysE/YggA [Pseudomonas putida S16] Length = 227 Score = 265 bits (676), Expect = 4e-69, Method: Composition-based stats. Identities = 149/209 (71%), Positives = 174/209 (83%) Query: 1 MPTVSTLLAFAALCLGMVLTPGPNMLYLVSRSVCQGRKAGLISLAGIALGLVFYMLCTAL 60 MP + LL FA +CLGMVLTPGPNM+YL+SRS+CQGRKAGLISL G+ALG V YM C AL Sbjct: 18 MPETTQLLTFALICLGMVLTPGPNMIYLISRSICQGRKAGLISLGGVALGFVIYMFCAAL 77 Query: 61 GISALLMTLPLAYDALRLAGALYLLYLAWQALKPGGRSTFALRTLPPDRPRKLFSMGLLT 120 GI+AL+M +P AYDALR+ GALYLLYLAWQAL+PGGRS F +R LP D PR+LF+MG T Sbjct: 78 GITALVMAVPFAYDALRIGGALYLLYLAWQALRPGGRSPFQVRDLPADSPRRLFTMGFAT 137 Query: 121 SLLNPKIAVMYLSLLPQFIQPEHGSVLLQSFALGLTQIVVGVSMNAVITLSAASISALLA 180 SLLNPKIAVMYLSL+PQFI+P HGSVLLQS LG TQI + VS+NA+I + A SI+ LA Sbjct: 138 SLLNPKIAVMYLSLMPQFIEPGHGSVLLQSLVLGSTQIAISVSVNALIAIMAGSIAVFLA 197 Query: 181 GRPHWQRLQRWLMGSVLAGLAVHMLIQRR 209 GRP WQ++QRWLMG+VLAGLAV ML + R Sbjct: 198 GRPLWQQVQRWLMGTVLAGLAVRMLAEGR 226 >gb|ADR59773.1| Lysine exporter protein LysE/YggA [Pseudomonas putida BIRD-1] Length = 210 Score = 264 bits (674), Expect = 7e-69, Method: Composition-based stats. Identities = 150/209 (71%), Positives = 175/209 (83%) Query: 1 MPTVSTLLAFAALCLGMVLTPGPNMLYLVSRSVCQGRKAGLISLAGIALGLVFYMLCTAL 60 MP S LL FA +CLGMVLTPGPNM+YL+SRS+CQGRKAGLISL G+ALG V YMLC A+ Sbjct: 1 MPETSQLLTFALICLGMVLTPGPNMIYLISRSICQGRKAGLISLGGVALGFVIYMLCAAM 60 Query: 61 GISALLMTLPLAYDALRLAGALYLLYLAWQALKPGGRSTFALRTLPPDRPRKLFSMGLLT 120 GI+AL+M +P AYDALR+ GALYLLYLAWQAL+PGGRS F LR LP D PR+LF+MG T Sbjct: 61 GITALVMAVPFAYDALRIGGALYLLYLAWQALRPGGRSPFQLRELPADSPRRLFTMGFAT 120 Query: 121 SLLNPKIAVMYLSLLPQFIQPEHGSVLLQSFALGLTQIVVGVSMNAVITLSAASISALLA 180 SLLNPKIAVMYLSL+PQFI+P HGSVLLQS LG TQI + V++NA+I + A SI+ LA Sbjct: 121 SLLNPKIAVMYLSLMPQFIEPGHGSVLLQSLVLGSTQIAISVTVNALIAIMAGSIAVFLA 180 Query: 181 GRPHWQRLQRWLMGSVLAGLAVHMLIQRR 209 GRP WQ++QRWLMG+VLAGLAV ML + R Sbjct: 181 GRPLWQQVQRWLMGTVLAGLAVRMLSEGR 209 >ref|NP_745788.1| amino acid transporter LysE [Pseudomonas putida KT2440] gb|AAN69252.1|AE016559_11 transporter, LysE family [Pseudomonas putida KT2440] Length = 210 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 147/209 (70%), Positives = 175/209 (83%) Query: 1 MPTVSTLLAFAALCLGMVLTPGPNMLYLVSRSVCQGRKAGLISLAGIALGLVFYMLCTAL 60 MP + LL FA +CLGMVLTPGPNM+YL+SRS+CQGR+AGLISL G+ALG V YM C A+ Sbjct: 1 MPEATQLLTFALICLGMVLTPGPNMIYLISRSICQGRQAGLISLGGVALGFVIYMFCAAM 60 Query: 61 GISALLMTLPLAYDALRLAGALYLLYLAWQALKPGGRSTFALRTLPPDRPRKLFSMGLLT 120 GI+AL+M +P AYDALR+ GALYLLYLAWQAL+PGG+S F LR LP D PR+LF+MG T Sbjct: 61 GITALVMAVPFAYDALRIGGALYLLYLAWQALRPGGQSPFQLRELPADSPRRLFTMGFAT 120 Query: 121 SLLNPKIAVMYLSLLPQFIQPEHGSVLLQSFALGLTQIVVGVSMNAVITLSAASISALLA 180 SLLNPKIAVMYLSL+PQFI+P HGSVLLQS LG TQI + V++NA+IT+ A SI+ LA Sbjct: 121 SLLNPKIAVMYLSLMPQFIEPGHGSVLLQSLVLGSTQIAISVTVNALITIMAGSIAVFLA 180 Query: 181 GRPHWQRLQRWLMGSVLAGLAVHMLIQRR 209 GRP WQ++QRWLMG+VLAGLAV ML + R Sbjct: 181 GRPLWQQVQRWLMGTVLAGLAVRMLAEGR 209