BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0068.p (313 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773514.1| phosphatidate cytidiltransferase [Herbaspiri... 548 e-154 ref|YP_932172.1| phosphatidate cytidylyltransferase [Azoarcus sp... 408 e-112 ref|YP_004157557.1| phosphatidate cytidylyltransferase [Variovor... 406 e-111 ref|YP_002946534.1| phosphatidate cytidylyltransferase [Variovor... 405 e-111 ref|YP_002005722.1| phosphatidate cytidylyltransferase [Cupriavi... 389 e-106 >ref|YP_003773514.1| phosphatidate cytidiltransferase [Herbaspirillum seropedicae SmR1] gb|ADJ61606.1| phosphatidate cytidiltransferase protein [Herbaspirillum seropedicae SmR1] Length = 313 Score = 548 bits (1412), Expect = e-154, Method: Composition-based stats. Identities = 302/312 (96%), Positives = 306/312 (98%) Query: 1 MTPQDTLFALFGGVFAVLALASSVGGLLRWRLAGRSSSVIDNLNARIKAWWWMIGALAIA 60 MT QDTL ALF GVFAVLALASSVGGLLRWRLAGR+SSV+DNLNARIKAWWWMIGALA+A Sbjct: 1 MTAQDTLIALFAGVFAVLALASSVGGLLRWRLAGRNSSVVDNLNARIKAWWWMIGALALA 60 Query: 61 FWIGKTGVVVLFAFISLQALREFISVTYTRVGDHRALLWCFFVFLPLQYVLIGMDWYGLF 120 FW+GKTGVVVLFAFISLQALREFISVTYTRVGDHRALLWCFFVFLPLQYVLIGMDWYGLF Sbjct: 61 FWMGKTGVVVLFAFISLQALREFISVTYTRVGDHRALLWCFFVFLPLQYVLIGMDWYGLF 120 Query: 121 SILIPVYAFLLLPISASLSTDTKHFLERAAKVQWGLMICVYCISHVPALLTLPIEGFEGR 180 SILIPVYAFLLLPISASLS DTKHFLERAAKVQWGLMICVYCISHVPALLTL I GFEGR Sbjct: 121 SILIPVYAFLLLPISASLSADTKHFLERAAKVQWGLMICVYCISHVPALLTLAIPGFEGR 180 Query: 181 NLQLIVFLVLTVQSSDVFQYVWGKLFGKRKLAPQISPSKTLEGLVGGVLTSTAVGAALYW 240 NLQLIVFLVLTVQSSDVFQYVWGKLFGKRKLAPQISPSKTLEGLVGGVLTSTAVGAALYW Sbjct: 181 NLQLIVFLVLTVQSSDVFQYVWGKLFGKRKLAPQISPSKTLEGLVGGVLTSTAVGAALYW 240 Query: 241 ITPFNVWQAALVALTINILGFFGGFVLSAIKRDRGLKDWGAMIEGHGGMLDRVDSISFSA 300 ITPFNVWQAALVALTINILGFFGGFVLSAIKRDRGLKDWGAMIEGHGGMLDRVDSISFSA Sbjct: 241 ITPFNVWQAALVALTINILGFFGGFVLSAIKRDRGLKDWGAMIEGHGGMLDRVDSISFSA 300 Query: 301 PIFFHILRYWWV 312 PIFFHILRYWWV Sbjct: 301 PIFFHILRYWWV 312 >ref|YP_932172.1| phosphatidate cytidylyltransferase [Azoarcus sp. BH72] emb|CAL93285.1| conserved hypothetical phosphatidate cytidylyltransferase [Azoarcus sp. BH72] Length = 314 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 234/313 (74%), Positives = 268/313 (85%), Gaps = 1/313 (0%) Query: 1 MTPQDTLFALFGGVFAVLALASSVGGLLRWRLA-GRSSSVIDNLNARIKAWWWMIGALAI 59 M +TL A+FGGVFAVLA AS VG +L++RLA R +VIDNLNAR+KAWW MIG +A+ Sbjct: 1 MNLSETLVAVFGGVFAVLAAASLVGAVLKFRLAPARPHAVIDNLNARLKAWWVMIGLIAL 60 Query: 60 AFWIGKTGVVVLFAFISLQALREFISVTYTRVGDHRALLWCFFVFLPLQYVLIGMDWYGL 119 A W G GV+ LFAFIS Q LREF+S+T+TR GDHRALLW FFV LPLQY LI + WYGL Sbjct: 61 AIWAGDGGVIGLFAFISFQCLREFVSLTHTRRGDHRALLWSFFVLLPLQYYLIAIGWYGL 120 Query: 120 FSILIPVYAFLLLPISASLSTDTKHFLERAAKVQWGLMICVYCISHVPALLTLPIEGFEG 179 FSILIPVY FLLLPISA+L +DT FLERAAKVQWGLMICVYC+SHVPALLTL I G+EG Sbjct: 121 FSILIPVYGFLLLPISAALGSDTTRFLERAAKVQWGLMICVYCLSHVPALLTLQIPGYEG 180 Query: 180 RNLQLIVFLVLTVQSSDVFQYVWGKLFGKRKLAPQISPSKTLEGLVGGVLTSTAVGAALY 239 + LIVFLVL VQSSDVFQYVWGKL G+ KL P +SPSKT+EGL+GGV +STAVGAA++ Sbjct: 181 KGALLIVFLVLVVQSSDVFQYVWGKLCGRHKLNPAVSPSKTVEGLLGGVASSTAVGAAMW 240 Query: 240 WITPFNVWQAALVALTINILGFFGGFVLSAIKRDRGLKDWGAMIEGHGGMLDRVDSISFS 299 WITPF+ QAA VAL +N+LGFFGGFVLSAIKRDRG+KDWG++IEGHGGMLDRVDSISFS Sbjct: 241 WITPFSPLQAAAVALVVNVLGFFGGFVLSAIKRDRGVKDWGSLIEGHGGMLDRVDSISFS 300 Query: 300 APIFFHILRYWWV 312 AP+FFHI+RYWWV Sbjct: 301 APVFFHIVRYWWV 313 >ref|YP_004157557.1| phosphatidate cytidylyltransferase [Variovorax paradoxus EPS] gb|ADU39446.1| phosphatidate cytidylyltransferase [Variovorax paradoxus EPS] Length = 318 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 215/308 (69%), Positives = 256/308 (83%), Gaps = 1/308 (0%) Query: 6 TLFALFGGVFAVLALASSVGGLLRWRLA-GRSSSVIDNLNARIKAWWWMIGALAIAFWIG 64 T LFGGVF VL LAS++G LL+WR+A G+ SVIDNLN+R+ AWW M+ + +AF +G Sbjct: 10 TTLKLFGGVFGVLVLASAIGALLKWRVAHGQPHSVIDNLNSRVNAWWVMVAVIGVAFALG 69 Query: 65 KTGVVVLFAFISLQALREFISVTYTRVGDHRALLWCFFVFLPLQYVLIGMDWYGLFSILI 124 K GV+VLF IS ALREFIS+ YTR GDH A+ FFV LP QY LI +DWYGL+SI I Sbjct: 70 KGGVIVLFYLISFYALREFISLAYTRRGDHGAIALAFFVALPGQYFLIWIDWYGLYSIYI 129 Query: 125 PVYAFLLLPISASLSTDTKHFLERAAKVQWGLMICVYCISHVPALLTLPIEGFEGRNLQL 184 PVYAFLLLPI A++ DT+ FLER +K+QWGLM+CV+CISHVPALLTL I GFEGRNL L Sbjct: 130 PVYAFLLLPILATMGGDTQRFLERTSKIQWGLMVCVFCISHVPALLTLQIPGFEGRNLLL 189 Query: 185 IVFLVLTVQSSDVFQYVWGKLFGKRKLAPQISPSKTLEGLVGGVLTSTAVGAALYWITPF 244 I FLV+ VQ SDV QYVWGKL GKRK+AP++SPSKT EGL+GGV ++TA+GAALYW TPF Sbjct: 190 IAFLVIVVQGSDVLQYVWGKLLGKRKVAPELSPSKTWEGLIGGVASATALGAALYWATPF 249 Query: 245 NVWQAALVALTINILGFFGGFVLSAIKRDRGLKDWGAMIEGHGGMLDRVDSISFSAPIFF 304 N WQAAL+ALTI ++GFFGG V+SAIKRDRG+KDWG+MIEGHGGMLDR+DS+ F+API+F Sbjct: 250 NPWQAALMALTICLMGFFGGLVMSAIKRDRGVKDWGSMIEGHGGMLDRLDSVIFAAPIYF 309 Query: 305 HILRYWWV 312 H LRYWWV Sbjct: 310 HALRYWWV 317 >ref|YP_002946534.1| phosphatidate cytidylyltransferase [Variovorax paradoxus S110] gb|ACS21268.1| phosphatidate cytidylyltransferase [Variovorax paradoxus S110] Length = 317 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 211/308 (68%), Positives = 256/308 (83%), Gaps = 1/308 (0%) Query: 6 TLFALFGGVFAVLALASSVGGLLRWRLAG-RSSSVIDNLNARIKAWWWMIGALAIAFWIG 64 T LFGGV VL LASS+G LL+WR+A + +SVIDNLNAR+ AWW M+ + ++F G Sbjct: 9 TTLQLFGGVAGVLILASSIGALLKWRVAAEQPNSVIDNLNARVNAWWVMVAVIGLSFAFG 68 Query: 65 KTGVVVLFAFISLQALREFISVTYTRVGDHRALLWCFFVFLPLQYVLIGMDWYGLFSILI 124 K GV+VLF IS ALREFIS+ YTR GDH A+ F++ LP+QY L+ +DWYGL+SI I Sbjct: 69 KGGVIVLFYLISFYALREFISLAYTRRGDHHAIAAAFYIGLPVQYFLVWIDWYGLYSIFI 128 Query: 125 PVYAFLLLPISASLSTDTKHFLERAAKVQWGLMICVYCISHVPALLTLPIEGFEGRNLQL 184 PVYAFL+LPI A++ DT+ FLER +K+QWGLM+CV+CISHVPALLTL I GFEGRNL L Sbjct: 129 PVYAFLVLPILAAVGGDTQRFLERTSKIQWGLMVCVFCISHVPALLTLQIPGFEGRNLLL 188 Query: 185 IVFLVLTVQSSDVFQYVWGKLFGKRKLAPQISPSKTLEGLVGGVLTSTAVGAALYWITPF 244 I FLV+ VQ SDV QYVWGKLFG+RK+AP++SPSKT EGLVGGV ++TA+GAALYW TPF Sbjct: 189 IAFLVIVVQGSDVLQYVWGKLFGRRKVAPELSPSKTWEGLVGGVASATALGAALYWATPF 248 Query: 245 NVWQAALVALTINILGFFGGFVLSAIKRDRGLKDWGAMIEGHGGMLDRVDSISFSAPIFF 304 N WQAAL+ALTI ++GFFGG V+SAIKRDRG+KDWG+MIEGHGGMLDR+DS+ F+API+F Sbjct: 249 NPWQAALMALTICLMGFFGGLVMSAIKRDRGVKDWGSMIEGHGGMLDRLDSVIFAAPIYF 308 Query: 305 HILRYWWV 312 H LRYWWV Sbjct: 309 HALRYWWV 316 >ref|YP_002005722.1| phosphatidate cytidylyltransferase [Cupriavidus taiwanensis LMG 19424] emb|CAQ69657.1| putative phosphatidate Cytidylyltransferase [Cupriavidus taiwanensis LMG 19424] Length = 317 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 206/304 (67%), Positives = 252/304 (82%), Gaps = 1/304 (0%) Query: 10 LFGGVFAVLALASSVGGLLRWRLAGRSS-SVIDNLNARIKAWWWMIGALAIAFWIGKTGV 68 LFGG+F VL LAS+V LLRWR+AG +VIDNL R+ AWWWMIG + +AF +G+T V Sbjct: 13 LFGGLFGVLLLASTVTALLRWRVAGGGQHAVIDNLGQRVSAWWWMIGIMGVAFALGRTAV 72 Query: 69 VVLFAFISLQALREFISVTYTRVGDHRALLWCFFVFLPLQYVLIGMDWYGLFSILIPVYA 128 +VLF +S ALREF+++ TR GDHRA++ FFVFLPLQYVL+ + WYG+FSILIPVYA Sbjct: 73 IVLFYLLSFFALREFVTIITTRRGDHRAIVAAFFVFLPLQYVLVYIGWYGMFSILIPVYA 132 Query: 129 FLLLPISASLSTDTKHFLERAAKVQWGLMICVYCISHVPALLTLPIEGFEGRNLQLIVFL 188 FL+LPI A+LS++T FLER A VQW +M+CV+CISHVPALLTLPI GF+GRNL LI FL Sbjct: 133 FLVLPILAALSSETTRFLERCAGVQWAVMVCVFCISHVPALLTLPIPGFDGRNLLLIAFL 192 Query: 189 VLTVQSSDVFQYVWGKLFGKRKLAPQISPSKTLEGLVGGVLTSTAVGAALYWITPFNVWQ 248 V+ VQ SDV QYVWGKL GKRK+AP +SPSKT+EG VGGV ++TA+GAAL+WITPF+ WQ Sbjct: 193 VIVVQGSDVLQYVWGKLCGKRKIAPLLSPSKTVEGFVGGVASATALGAALWWITPFSPWQ 252 Query: 249 AALVALTINILGFFGGFVLSAIKRDRGLKDWGAMIEGHGGMLDRVDSISFSAPIFFHILR 308 A +AL I ++GF GG V+SAIKRDRG+KDWG MI+GHGGMLDR+DS+ F+AP+FFHI R Sbjct: 253 AGAIALVIALMGFLGGLVMSAIKRDRGIKDWGHMIQGHGGMLDRLDSVVFAAPVFFHITR 312 Query: 309 YWWV 312 YWWV Sbjct: 313 YWWV 316