BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0060.p         (85 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773506.1| hypothetical protein Hsero_0068 [Herbaspiril...   159   2e-37
ref|YP_004754813.1| hypothetical protein CFU_4168 [Collimonas fu...   114   4e-24
ref|YP_001098492.1| hypothetical protein HEAR0127 [Herminiimonas...   112   2e-23
ref|YP_001351843.1| hypothetical protein mma_0153 [Janthinobacte...   112   2e-23
ref|ZP_08273806.1| hypothetical protein IMCC9480_2071 [Oxalobact...   103   1e-20

>ref|YP_003773506.1| hypothetical protein Hsero_0068 [Herbaspirillum seropedicae SmR1]
 gb|ADJ61598.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 85

 Score =  159 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 83/85 (97%), Positives = 85/85 (100%)

Query: 1  MNLIYNSEQYSVVEFGADSDHEALRFGGYEIMDKSGQREIYIDGPAAELFRKDVQELIAS 60
          MNLIYNSEQYSVVEFGAD+DHEALRFGGYEIMDKSGQREIYIDGPAAELFRKDVQELIAS
Sbjct: 1  MNLIYNSEQYSVVEFGADTDHEALRFGGYEIMDKSGQREIYIDGPAAELFRKDVQELIAS 60

Query: 61 EPTMDDIDNFLSRYDVMMRHPMTLH 85
          EPTM+DIDNFLSRYDVMMRHPMTLH
Sbjct: 61 EPTMEDIDNFLSRYDVMMRHPMTLH 85


>ref|YP_004754813.1| hypothetical protein CFU_4168 [Collimonas fungivorans Ter331]
 gb|AEK63990.1| hypothetical protein CFU_4168 [Collimonas fungivorans Ter331]
          Length = 85

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 58/85 (68%), Positives = 69/85 (81%)

Query: 1  MNLIYNSEQYSVVEFGADSDHEALRFGGYEIMDKSGQREIYIDGPAAELFRKDVQELIAS 60
          MNLIYNS+QYSVVEFGAD   EALRFGGYEI+DKS +REI+I G  AE FRK V++LIA+
Sbjct: 1  MNLIYNSDQYSVVEFGADEQREALRFGGYEIVDKSFKREIFIAGALAEFFRKGVEDLIAT 60

Query: 61 EPTMDDIDNFLSRYDVMMRHPMTLH 85
          EP+++DID FL  YD MM  P+TL 
Sbjct: 61 EPSIEDIDAFLGNYDSMMSQPVTLQ 85


>ref|YP_001098492.1| hypothetical protein HEAR0127 [Herminiimonas arsenicoxydans]
 emb|CAL60363.1| conserved hypothetical protein [Herminiimonas arsenicoxydans]
          Length = 85

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 54/85 (63%), Positives = 68/85 (80%)

Query: 1  MNLIYNSEQYSVVEFGADSDHEALRFGGYEIMDKSGQREIYIDGPAAELFRKDVQELIAS 60
          MN+IYNSEQYSVVEFG D D +ALRFGGYEIMDK  +REI+I G  AELFR+DV++LI +
Sbjct: 1  MNVIYNSEQYSVVEFGVDDDCDALRFGGYEIMDKPAKREIFIAGALAELFRRDVKDLIVT 60

Query: 61 EPTMDDIDNFLSRYDVMMRHPMTLH 85
          EP++++ID+FL  Y   M  P+T H
Sbjct: 61 EPSIEEIDDFLGNYGSFMSQPVTFH 85


>ref|YP_001351843.1| hypothetical protein mma_0153 [Janthinobacterium sp. Marseille]
 gb|ABR91083.1| Uncharacterized conserved protein [Janthinobacterium sp.
          Marseille]
          Length = 85

 Score =  112 bits (279), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 54/85 (63%), Positives = 71/85 (83%)

Query: 1  MNLIYNSEQYSVVEFGADSDHEALRFGGYEIMDKSGQREIYIDGPAAELFRKDVQELIAS 60
          MN+IYNSEQYSVVEFGAD   +ALRFGGYEIMDK  +REI+I G +AE FRK+V++LIA+
Sbjct: 1  MNVIYNSEQYSVVEFGADDGQDALRFGGYEIMDKPAKREIFIAGASAESFRKNVRDLIAT 60

Query: 61 EPTMDDIDNFLSRYDVMMRHPMTLH 85
          EP++++ID+FL+ YD  M   +T+H
Sbjct: 61 EPSVEEIDDFLANYDAFMSQALTIH 85


>ref|ZP_08273806.1| hypothetical protein IMCC9480_2071 [Oxalobacteraceae bacterium
          IMCC9480]
 gb|EGF32721.1| hypothetical protein IMCC9480_2071 [Oxalobacteraceae bacterium
          IMCC9480]
          Length = 85

 Score =  103 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 53/85 (62%), Positives = 66/85 (77%)

Query: 1  MNLIYNSEQYSVVEFGADSDHEALRFGGYEIMDKSGQREIYIDGPAAELFRKDVQELIAS 60
          MNLIYNS+QYSVVEFGAD+  EALR GGYEIMDK G+REI+I G  AE FR+ V++LIAS
Sbjct: 1  MNLIYNSDQYSVVEFGADTALEALRSGGYEIMDKPGKREIFIAGSLAEAFREHVEKLIAS 60

Query: 61 EPTMDDIDNFLSRYDVMMRHPMTLH 85
           P  +  D FL+ YD +M +P+ +H
Sbjct: 61 NPDAEQFDAFLAGYDEVMHNPVIMH 85