BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0051.p (220 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001101639.1| 16S rRNA methyltransferase GidB [Herminiimon... 285 2e-75 ref|YP_001355328.1| 16S rRNA methyltransferase GidB [Janthinobac... 275 4e-72 ref|ZP_08272542.1| Ribosomal RNA small subunit methyltransferase... 272 3e-71 ref|YP_004755048.1| ribosomal RNA small subunit methyltransferas... 261 5e-68 ref|YP_003778158.1| methyltransferase GidB [Herbaspirillum serop... 232 4e-59 >ref|YP_001101639.1| 16S rRNA methyltransferase GidB [Herminiimonas arsenicoxydans] sp|A4GAI1|RSMG_HERAR RecName: Full=Ribosomal RNA small subunit methyltransferase G; AltName: Full=16S rRNA 7-methylguanosine methyltransferase; Short=16S rRNA m7G methyltransferase emb|CAL63518.1| Methyltransferase gidB (Glucose-inhibited division protein B) [Herminiimonas arsenicoxydans] Length = 218 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 148/213 (69%), Positives = 172/213 (80%) Query: 6 DLNNLTRTLKEGATAMGLALSAAQIDKLMAYQALLAKWNKVYNLTALRDPAQMVTHHLLD 65 D LT L EGA + L LS AQI KL+ Y AL+ KWN VYNLTA+RDP QMVT HLLD Sbjct: 5 DRPALTAILVEGARGLSLTLSEAQITKLIDYLALMVKWNSVYNLTAVRDPLQMVTQHLLD 64 Query: 66 SLSAVSAFAGAQRVLDVGAGGGLPGIVLAIWAAEAQPQMQITLVDTVSKKTAFLNQVKAQ 125 SL+AVSAFAGA+ VLDVGAGGGLPGIVLAIWAAEA+P+M+++L+DTV KKTAFL QVKA+ Sbjct: 65 SLAAVSAFAGAKNVLDVGAGGGLPGIVLAIWAAEAEPEMRVSLIDTVHKKTAFLTQVKAE 124 Query: 126 LHLGNVTVLHARVEQLPVEQQYDVITSRAFAELKDFVTWSNHLLQQGGKYIALKGVLPQE 185 L L NV+V ARVEQ ++DVITSRAFAEL DFV WS HLL +GG++IALKGV P Sbjct: 125 LGLANVSVHTARVEQWNAPHKFDVITSRAFAELNDFVNWSGHLLDEGGEFIALKGVAPDT 184 Query: 186 EIDRLPAGWKVQQVQPLQVPGLDAERHLIFMER 218 E+ LPAGWKV++V+PLQVP L AERHLIF+ER Sbjct: 185 EVAHLPAGWKVREVRPLQVPTLQAERHLIFIER 217 >ref|YP_001355328.1| 16S rRNA methyltransferase GidB [Janthinobacterium sp. Marseille] sp|A6T481|RSMG_JANMA RecName: Full=Ribosomal RNA small subunit methyltransferase G; AltName: Full=16S rRNA 7-methylguanosine methyltransferase; Short=16S rRNA m7G methyltransferase gb|ABR88439.1| glucose inhibited division protein B [Janthinobacterium sp. Marseille] Length = 220 Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats. Identities = 145/214 (67%), Positives = 172/214 (80%) Query: 6 DLNNLTRTLKEGATAMGLALSAAQIDKLMAYQALLAKWNKVYNLTALRDPAQMVTHHLLD 65 D LT L +GA + L LS AQI KL+ Y AL+AKWN VYNLTA+RDP QMVT HLLD Sbjct: 5 DRPALTVLLVQGARDLSLNLSEAQITKLIDYLALMAKWNSVYNLTAVRDPVQMVTQHLLD 64 Query: 66 SLSAVSAFAGAQRVLDVGAGGGLPGIVLAIWAAEAQPQMQITLVDTVSKKTAFLNQVKAQ 125 SL+AVSAF+ A+ VLDVGAGGGLPGIVLAIWAAEA P+M+I+++DTV KKTAFL QVKA+ Sbjct: 65 SLAAVSAFSNAKNVLDVGAGGGLPGIVLAIWAAEAHPEMRISMIDTVHKKTAFLTQVKAE 124 Query: 126 LHLGNVTVLHARVEQLPVEQQYDVITSRAFAELKDFVTWSNHLLQQGGKYIALKGVLPQE 185 L+L NV+V ARVEQ Q++DVITSRAFA+L DFV WS HLL GG+YIALKGV P Sbjct: 125 LNLSNVSVYTARVEQWQAPQKFDVITSRAFADLSDFVNWSEHLLADGGQYIALKGVAPDT 184 Query: 186 EIDRLPAGWKVQQVQPLQVPGLDAERHLIFMERT 219 E+ LPAGW+V++V+ LQVP L AERHL+F+ERT Sbjct: 185 EVAGLPAGWQVREVRALQVPTLQAERHLVFIERT 218 >ref|ZP_08272542.1| Ribosomal RNA small subunit methyltransferase G [Oxalobacteraceae bacterium IMCC9480] gb|EGF33990.1| Ribosomal RNA small subunit methyltransferase G [Oxalobacteraceae bacterium IMCC9480] Length = 221 Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats. Identities = 140/220 (63%), Positives = 174/220 (79%) Query: 1 MSNTADLNNLTRTLKEGATAMGLALSAAQIDKLMAYQALLAKWNKVYNLTALRDPAQMVT 60 M+NT + LT+ L++GAT++ L L A +++L+ Y ALLAKWN VYNLTA+RDP QMVT Sbjct: 1 MTNTFNRLELTQLLRDGATSLDLFLEPATLERLIDYVALLAKWNTVYNLTAIRDPQQMVT 60 Query: 61 HHLLDSLSAVSAFAGAQRVLDVGAGGGLPGIVLAIWAAEAQPQMQITLVDTVSKKTAFLN 120 HLLD+L+ + AF + VLDVGAGGGLPG+VLAIWA +A P ++I++VDTV KKTAFL Sbjct: 61 QHLLDTLAILPAFLHVKHVLDVGAGGGLPGMVLAIWAQQANPALRISMVDTVHKKTAFLT 120 Query: 121 QVKAQLHLGNVTVLHARVEQLPVEQQYDVITSRAFAELKDFVTWSNHLLQQGGKYIALKG 180 QVK +L L NVTV RVE L V Q +DVITSRAFAEL DFV WS HLL + G++IA+KG Sbjct: 121 QVKVELGLTNVTVHTGRVEALKVTQLFDVITSRAFAELLDFVNWSGHLLAEDGRFIAMKG 180 Query: 181 VLPQEEIDRLPAGWKVQQVQPLQVPGLDAERHLIFMERTT 220 LP +EI RLPAGWKV +++PLQVPGL+AERHLIF+ER T Sbjct: 181 QLPVDEIARLPAGWKVAEIRPLQVPGLNAERHLIFIERDT 220 >ref|YP_004755048.1| ribosomal RNA small subunit methyltransferase G [Collimonas fungivorans Ter331] gb|AEK64225.1| Ribosomal RNA small subunit methyltransferase G [Collimonas fungivorans Ter331] Length = 223 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 138/209 (66%), Positives = 175/209 (83%) Query: 10 LTRTLKEGATAMGLALSAAQIDKLMAYQALLAKWNKVYNLTALRDPAQMVTHHLLDSLSA 69 L +L++GA+A+G+AL Q +L+AY LLAKWNKVYNLT++R+PAQM+THHLLDSL+ Sbjct: 14 LEASLQQGASALGIALDQGQQQQLLAYLDLLAKWNKVYNLTSIREPAQMMTHHLLDSLAV 73 Query: 70 VSAFAGAQRVLDVGAGGGLPGIVLAIWAAEAQPQMQITLVDTVSKKTAFLNQVKAQLHLG 129 V AF A+ VLDVGAGGGLPG++LAIWA +A+P+M+++++DTV KKTAFL QVKA+L LG Sbjct: 74 VPAFTEAENVLDVGAGGGLPGMILAIWAGKARPRMRVSMIDTVHKKTAFLTQVKAELGLG 133 Query: 130 NVTVLHARVEQLPVEQQYDVITSRAFAELKDFVTWSNHLLQQGGKYIALKGVLPQEEIDR 189 NV+V ARVEQL V Q++DVITSRAFAEL DF+ WS HLL G++IALKGV P EEI R Sbjct: 134 NVSVHTARVEQLQVAQKFDVITSRAFAELTDFINWSEHLLTDDGRFIALKGVRPDEEIAR 193 Query: 190 LPAGWKVQQVQPLQVPGLDAERHLIFMER 218 LPAGW+V + +PL VPGLDAERHL+F++R Sbjct: 194 LPAGWQVTETRPLAVPGLDAERHLVFIKR 222 >ref|YP_003778158.1| methyltransferase GidB [Herbaspirillum seropedicae SmR1] gb|ADJ66250.1| methyltransferase GidB (glucose inhibited division protein B) protein [Herbaspirillum seropedicae SmR1] Length = 139 Score = 232 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 129/139 (92%), Positives = 134/139 (96%) Query: 1 MSNTADLNNLTRTLKEGATAMGLALSAAQIDKLMAYQALLAKWNKVYNLTALRDPAQMVT 60 MSNTADLN+LTRTLKEGATAMGL LS AQ+DKLMAYQALLAKWNKVYNLTALRDPAQMVT Sbjct: 1 MSNTADLNHLTRTLKEGATAMGLTLSDAQLDKLMAYQALLAKWNKVYNLTALRDPAQMVT 60 Query: 61 HHLLDSLSAVSAFAGAQRVLDVGAGGGLPGIVLAIWAAEAQPQMQITLVDTVSKKTAFLN 120 HHLLDSLSAVSAF GAQRVLDVGAGGGLPGIVLAIWAA+AQPQM+ITLVDTV KKTAFLN Sbjct: 61 HHLLDSLSAVSAFTGAQRVLDVGAGGGLPGIVLAIWAAQAQPQMKITLVDTVQKKTAFLN 120 Query: 121 QVKAQLHLGNVTVLHARVE 139 QVKAQL LGNVTV+HARVE Sbjct: 121 QVKAQLQLGNVTVVHARVE 139