BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0049.p (253 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002538282.1| Inner membrane protein yfcA, putative [Ricin... 373 e-101 ref|YP_003778160.1| permease [Herbaspirillum seropedicae SmR1] >... 372 e-101 ref|YP_004755050.1| membrane protein [Collimonas fungivorans Ter... 317 1e-84 ref|ZP_08272540.1| hypothetical protein IMCC9480_1353 [Oxalobact... 278 5e-73 ref|YP_001101641.1| hypothetical protein HEAR3419 [Herminiimonas... 278 8e-73 >ref|XP_002538282.1| Inner membrane protein yfcA, putative [Ricinus communis] gb|EEF24101.1| Inner membrane protein yfcA, putative [Ricinus communis] Length = 301 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 237/253 (93%), Positives = 246/253 (97%) Query: 1 MLDYVVLCGAAFVAGLIDAVVGGGGLVLVPTLFSVFPNTAPATLLGTNKVAGVMGTSAAA 60 +LDY++LCGAAFVAGLIDAVVGGGGLVLVPTLFSVFP T PATLLGTNKV GVMGTSAAA Sbjct: 49 VLDYLILCGAAFVAGLIDAVVGGGGLVLVPTLFSVFPTTTPATLLGTNKVTGVMGTSAAA 108 Query: 61 INFARKVAVRWSTVTPAAMAAFAFSFFGAYVVTHIPTDLIRKALPFVLIAVALYTLKKKD 120 INFARKVAVRWSTVTPAAMAAFAFSFFGAYVVTHIPTDLIRKALPFVLIAVALYTLKKKD Sbjct: 109 INFARKVAVRWSTVTPAAMAAFAFSFFGAYVVTHIPTDLIRKALPFVLIAVALYTLKKKD 168 Query: 121 FGTTHAPTLSGTREIIYAALIGGAVGFYDGVFGPGTGSFLVFLFVRVFSYDFLSASAVSK 180 FGTTHAPTLSG+REI YAALIGGAVGFYDGVFGPGTGSFLVFLFVRVFSYDFLSASA +K Sbjct: 169 FGTTHAPTLSGSREIFYAALIGGAVGFYDGVFGPGTGSFLVFLFVRVFSYDFLSASAAAK 228 Query: 181 FVNIATNLAALCWFGYSGHVIWQLGLLMAVFNIGGSLVGTRLAMKHGSVFVRKLFLVVVG 240 FVN+ATNLAALCWFGYSGHVIWQLGLLMAVFN+ GSLVGT+LAMKHGSVFVRKLFLVVVG Sbjct: 229 FVNVATNLAALCWFGYSGHVIWQLGLLMAVFNVAGSLVGTKLAMKHGSVFVRKLFLVVVG 288 Query: 241 ALILKSGYDAFLK 253 LILKSGYDAFL+ Sbjct: 289 VLILKSGYDAFLR 301 >ref|YP_003778160.1| permease [Herbaspirillum seropedicae SmR1] gb|ADJ66252.1| permease protein [Herbaspirillum seropedicae SmR1] Length = 303 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 237/253 (93%), Positives = 246/253 (97%) Query: 1 MLDYVVLCGAAFVAGLIDAVVGGGGLVLVPTLFSVFPNTAPATLLGTNKVAGVMGTSAAA 60 +LDY++LCGAAFVAGLIDAVVGGGGLVLVPTLFSVFP T PATLLGTNKV GVMGTSAAA Sbjct: 51 VLDYLILCGAAFVAGLIDAVVGGGGLVLVPTLFSVFPTTTPATLLGTNKVTGVMGTSAAA 110 Query: 61 INFARKVAVRWSTVTPAAMAAFAFSFFGAYVVTHIPTDLIRKALPFVLIAVALYTLKKKD 120 INFARKVAVRWSTVTPAAMAAFAFSFFGAYVVTHIPTDLIRKALPFVLIAVALYTLKKKD Sbjct: 111 INFARKVAVRWSTVTPAAMAAFAFSFFGAYVVTHIPTDLIRKALPFVLIAVALYTLKKKD 170 Query: 121 FGTTHAPTLSGTREIIYAALIGGAVGFYDGVFGPGTGSFLVFLFVRVFSYDFLSASAVSK 180 FGTTHAPTLSG+REI YAALIGGAVGFYDGVFGPGTGSFLVFLFVRVFSYDFLSASA +K Sbjct: 171 FGTTHAPTLSGSREIFYAALIGGAVGFYDGVFGPGTGSFLVFLFVRVFSYDFLSASAAAK 230 Query: 181 FVNIATNLAALCWFGYSGHVIWQLGLLMAVFNIGGSLVGTRLAMKHGSVFVRKLFLVVVG 240 FVN+ATNLAALCWFGYSGHVIWQLGLLMAVFN+ GSLVGT+LAMKHGSVFVRKLFLVVVG Sbjct: 231 FVNVATNLAALCWFGYSGHVIWQLGLLMAVFNVAGSLVGTKLAMKHGSVFVRKLFLVVVG 290 Query: 241 ALILKSGYDAFLK 253 LILKSGYDAFL+ Sbjct: 291 VLILKSGYDAFLR 303 >ref|YP_004755050.1| membrane protein [Collimonas fungivorans Ter331] gb|AEK64227.1| Membrane protein, putative [Collimonas fungivorans Ter331] Length = 267 Score = 317 bits (811), Expect = 1e-84, Method: Composition-based stats. Identities = 179/251 (71%), Positives = 219/251 (87%) Query: 3 DYVVLCGAAFVAGLIDAVVGGGGLVLVPTLFSVFPNTAPATLLGTNKVAGVMGTSAAAIN 62 D+++L A+FVAGLIDAVVGGGGL+ +P LFS+ PN+APAT+ GTNK+AG+ GT AAA+N Sbjct: 17 DFLILALASFVAGLIDAVVGGGGLIQIPALFSMLPNSAPATIFGTNKLAGIFGTGAAAVN 76 Query: 63 FARKVAVRWSTVTPAAMAAFAFSFFGAYVVTHIPTDLIRKALPFVLIAVALYTLKKKDFG 122 FA++V + WS PAA AAF FSF GAY VTHIPT+ IRK+LPF+L+AVA+YT+KKKDFG Sbjct: 77 FAKRVKLAWSAALPAAGAAFLFSFLGAYTVTHIPTEAIRKSLPFILLAVAIYTIKKKDFG 136 Query: 123 TTHAPTLSGTREIIYAALIGGAVGFYDGVFGPGTGSFLVFLFVRVFSYDFLSASAVSKFV 182 + HAP +G++E ++A LIGG +GFYDGVFGPGTGSFL+FLFVR F +DFL+ASAVSK + Sbjct: 137 SIHAPLHTGSKEKLFAVLIGGGIGFYDGVFGPGTGSFLIFLFVRFFGFDFLAASAVSKVI 196 Query: 183 NIATNLAALCWFGYSGHVIWQLGLLMAVFNIGGSLVGTRLAMKHGSVFVRKLFLVVVGAL 242 N+ATNLAAL WFGYSGH+IWQLGL+MA+ N+GGSLVGTRLA+KHGS FVRKLFL+VV L Sbjct: 197 NVATNLAALLWFGYSGHIIWQLGLIMAICNVGGSLVGTRLALKHGSGFVRKLFLMVVSVL 256 Query: 243 ILKSGYDAFLK 253 ILK+GYDAFLK Sbjct: 257 ILKTGYDAFLK 267 >ref|ZP_08272540.1| hypothetical protein IMCC9480_1353 [Oxalobacteraceae bacterium IMCC9480] gb|EGF33988.1| hypothetical protein IMCC9480_1353 [Oxalobacteraceae bacterium IMCC9480] Length = 299 Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats. Identities = 168/253 (66%), Positives = 200/253 (79%) Query: 1 MLDYVVLCGAAFVAGLIDAVVGGGGLVLVPTLFSVFPNTAPATLLGTNKVAGVMGTSAAA 60 M ++ L AAF AG +DAVVGGGGL+ +P LFSVFPN APATLLGTNK++G GT AAA Sbjct: 47 MDEFAFLYVAAFFAGFVDAVVGGGGLIQLPALFSVFPNIAPATLLGTNKLSGFWGTGAAA 106 Query: 61 INFARKVAVRWSTVTPAAMAAFAFSFFGAYVVTHIPTDLIRKALPFVLIAVALYTLKKKD 120 I+FAR+V + WS PAA+AAF F+F GAY VT IP D IRK LP +LIAVA YTLK+KD Sbjct: 107 ISFARRVKIEWSAAVPAAVAAFVFAFAGAYTVTRIPPDFIRKMLPLILIAVAAYTLKRKD 166 Query: 121 FGTTHAPTLSGTREIIYAALIGGAVGFYDGVFGPGTGSFLVFLFVRVFSYDFLSASAVSK 180 G+THAP G +E A +GG+VGFYDG FGPGTGSFLVFLFVRVF +DFL ASAV+K Sbjct: 167 MGSTHAPLHKGAKERWLAIAVGGSVGFYDGFFGPGTGSFLVFLFVRVFGFDFLGASAVAK 226 Query: 181 FVNIATNLAALCWFGYSGHVIWQLGLLMAVFNIGGSLVGTRLAMKHGSVFVRKLFLVVVG 240 VN+A N++AL WF SGH++WQ+GL MAV N+ GSL+G+R+A+KHGS FVRKLFL VV Sbjct: 227 VVNVACNISALLWFWKSGHLLWQIGLAMAVCNVLGSLIGSRMAIKHGSGFVRKLFLAVVL 286 Query: 241 ALILKSGYDAFLK 253 LILK+GYDAF K Sbjct: 287 LLILKTGYDAFFK 299 >ref|YP_001101641.1| hypothetical protein HEAR3419 [Herminiimonas arsenicoxydans] emb|CAL63520.1| Conserved hypothetical proteine, putative permease [Herminiimonas arsenicoxydans] Length = 254 Score = 278 bits (710), Expect = 8e-73, Method: Composition-based stats. Identities = 178/252 (70%), Positives = 206/252 (81%) Query: 1 MLDYVVLCGAAFVAGLIDAVVGGGGLVLVPTLFSVFPNTAPATLLGTNKVAGVMGTSAAA 60 M DYV+L AAFVAG+IDAVVGGGGL+ +P LFS PN APATLLGT+K+AGV GT AAA Sbjct: 1 MEDYVILAAAAFVAGMIDAVVGGGGLIQLPALFSTLPNVAPATLLGTSKLAGVWGTGAAA 60 Query: 61 INFARKVAVRWSTVTPAAMAAFAFSFFGAYVVTHIPTDLIRKALPFVLIAVALYTLKKKD 120 + FAR+V V+WST PAA+AAFA SF GAY VTHIP D IRK LPF+L+AVA YT KKD Sbjct: 61 LGFARRVRVQWSTAVPAAVAAFALSFAGAYTVTHIPPDFIRKLLPFILVAVAAYTFAKKD 120 Query: 121 FGTTHAPTLSGTREIIYAALIGGAVGFYDGVFGPGTGSFLVFLFVRVFSYDFLSASAVSK 180 FG+ HAP G +E +A L+GG +GFYDG FGPGTGSFLVFLFVR F +DFL ASAV+K Sbjct: 121 FGSIHAPLHIGGKERAWAILVGGGIGFYDGFFGPGTGSFLVFLFVRFFGFDFLGASAVAK 180 Query: 181 FVNIATNLAALCWFGYSGHVIWQLGLLMAVFNIGGSLVGTRLAMKHGSVFVRKLFLVVVG 240 VN+A N+AAL WFGYSGH++WQLG LMAV N+ GSLVG RLA++HGS FVRKLFLVVV Sbjct: 181 VVNVACNIAALLWFGYSGHLLWQLGALMAVCNVLGSLVGIRLALRHGSGFVRKLFLVVVT 240 Query: 241 ALILKSGYDAFL 252 LILK+GYDAF+ Sbjct: 241 GLILKTGYDAFI 252