BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0044.p (348 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001354175.1| ABC-type sulfonate/nitrate transport system ... 513 e-143 ref|ZP_05635923.1| ABC transporter, periplasmic substrate-bindin... 506 e-141 ref|YP_003259190.1| ABC transporter periplasmic protein [Pectoba... 505 e-141 ref|YP_272626.1| ABC transporter periplasmic substrate-binding p... 503 e-140 ref|YP_003016981.1| ABC transporter periplasmic binding protein ... 501 e-140 >ref|YP_001354175.1| ABC-type sulfonate/nitrate transport system substrate-binding protein [Janthinobacterium sp. Marseille] gb|ABR89284.1| ABC-type sulfonate/nitrate transport system substrate-binding protein [Janthinobacterium sp. Marseille] Length = 347 Score = 513 bits (1322), Expect = e-143, Method: Composition-based stats. Identities = 257/327 (78%), Positives = 292/327 (89%), Gaps = 1/327 (0%) Query: 23 AMLAGVIALGSAASVHAEGTIRIAQQFGIGYLILDVVQDQKLIEKYGKQEGVDIKVEWTS 82 +++A AL SA AEG I IAQQFGIGYLILDVV+D++LIEKYGKQ+G+DI+V+W S Sbjct: 21 SVIAVATALLSALPARAEGKISIAQQFGIGYLILDVVRDRQLIEKYGKQQGIDIQVDWAS 80 Query: 83 LSGATGMNEALLAGALDVVSAGAPPALVLWDRTRGRQNVKAIASLGSMPNYLLSNNPKVR 142 +SGAT MNEALLAGALDVVSAG PP L +WDRTRG+QNVKA+A+LGS+PNYLLSNNP V+ Sbjct: 81 ISGATAMNEALLAGALDVVSAGVPPMLTMWDRTRGKQNVKAVAALGSLPNYLLSNNPAVK 140 Query: 143 TIKDFSDKDRIAVPAAGVGFQSRTLQIETAKVFGKEDFKRFDRISVSLSHPDATAALIAG 202 T+KD SDKDRIAVPAAGVGFQSRTLQIETA+ FGK++FK+FD ISVSL HPDATAALIAG Sbjct: 141 TLKDLSDKDRIAVPAAGVGFQSRTLQIETARQFGKDNFKKFDNISVSLPHPDATAALIAG 200 Query: 203 GSEINAHFSSPPFQYQAL-ENKNVHKVISSYDIMGGPATFNVLYTTQKFHDENPKTYRAF 261 GSEIN HFSS PF YQAL N NVHKVISSYDI+GGPATFNVLYTTQKFHDENPKTY+AF Sbjct: 201 GSEINTHFSSAPFYYQALAANSNVHKVISSYDILGGPATFNVLYTTQKFHDENPKTYKAF 260 Query: 262 YKALVEAAEFVRNNKAKAADTFIRVQKSKLSPAFVRKIVEDPEINFTVSPERTFVYAEQL 321 Y ALVEAA+ ++ +KAKAADTFIR+QKSKLSP VRKIVEDPE +FTVSP RTFVYA++L Sbjct: 261 YAALVEAAQLIKADKAKAADTFIRIQKSKLSPELVRKIVEDPENDFTVSPHRTFVYADEL 320 Query: 322 HALGVLKNRASSWKDYFFEEAYAQPGS 348 LGV+KN+A+SWKDYFFEEAYAQPGS Sbjct: 321 QKLGVIKNKAASWKDYFFEEAYAQPGS 347 >ref|ZP_05635923.1| ABC transporter, periplasmic substrate-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] gb|EGH89570.1| sulfonate/nitrate/taurine transport system substrate-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 339 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 247/334 (73%), Positives = 292/334 (87%), Gaps = 3/334 (0%) Query: 18 YKPFAAMLAGVIALGSA---ASVHAEGTIRIAQQFGIGYLILDVVQDQKLIEKYGKQEGV 74 ++P +LAG + L A + V AEG I IAQQFGIGYLILDVV+DQKLIEK+GK++G+ Sbjct: 6 HRPALTVLAGTLGLFGALLSSGVQAEGKISIAQQFGIGYLILDVVRDQKLIEKHGKEQGL 65 Query: 75 DIKVEWTSLSGATGMNEALLAGALDVVSAGAPPALVLWDRTRGRQNVKAIASLGSMPNYL 134 DIKV+W S+SGAT MNEALLAGALDVVSAG PP L +WDRT+G+QNVKAIASLGSMPNYL Sbjct: 66 DIKVDWNSISGATAMNEALLAGALDVVSAGVPPMLTVWDRTKGKQNVKAIASLGSMPNYL 125 Query: 135 LSNNPKVRTIKDFSDKDRIAVPAAGVGFQSRTLQIETAKVFGKEDFKRFDRISVSLSHPD 194 L+NNP V+TIKDF+DKDRIAVPAAGVGFQSRTLQIETAKVFG +++K+FD ISVSL+HPD Sbjct: 126 LTNNPNVKTIKDFTDKDRIAVPAAGVGFQSRTLQIETAKVFGNDNYKKFDNISVSLAHPD 185 Query: 195 ATAALIAGGSEINAHFSSPPFQYQALENKNVHKVISSYDIMGGPATFNVLYTTQKFHDEN 254 ATAAL+AGGSEIN+HFSSPPFQYQALEN NVHKV+SSYD++GG ATFNVLYTT+KFHDEN Sbjct: 186 ATAALLAGGSEINSHFSSPPFQYQALENPNVHKVLSSYDVLGGQATFNVLYTTEKFHDEN 245 Query: 255 PKTYRAFYKALVEAAEFVRNNKAKAADTFIRVQKSKLSPAFVRKIVEDPEINFTVSPERT 314 PKTY+AFY AL EA + ++ +K AA T+IRV++SKL V KIV DPEI+FTV+P+RT Sbjct: 246 PKTYKAFYDALAEAEKIIKADKPAAAQTYIRVEQSKLPLPLVEKIVADPEIDFTVTPQRT 305 Query: 315 FVYAEQLHALGVLKNRASSWKDYFFEEAYAQPGS 348 F+YAE+LH LGVLKN+A+SWKDYFFEEA+ GS Sbjct: 306 FIYAEKLHELGVLKNKAASWKDYFFEEAHGTEGS 339 >ref|YP_003259190.1| ABC transporter periplasmic protein [Pectobacterium wasabiae WPP163] gb|ACX87583.1| ABC transporter periplasmic binding protein [Pectobacterium wasabiae WPP163] Length = 340 Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 249/325 (76%), Positives = 289/325 (88%), Gaps = 1/325 (0%) Query: 25 LAGVIALG-SAASVHAEGTIRIAQQFGIGYLILDVVQDQKLIEKYGKQEGVDIKVEWTSL 83 LA +I L +A +AEGTI IAQQFGIGYLILDVV+DQ LIEK+GKQ+G+DIKV+W +L Sbjct: 16 LAAMIGLTLTAFGANAEGTISIAQQFGIGYLILDVVRDQSLIEKHGKQQGLDIKVDWRTL 75 Query: 84 SGATGMNEALLAGALDVVSAGAPPALVLWDRTRGRQNVKAIASLGSMPNYLLSNNPKVRT 143 SGAT +NEALL+GALDV SAG PP L +WDRT+GRQNVKAIASLGSMPNYLLSNNP V+T Sbjct: 76 SGATAINEALLSGALDVASAGVPPMLTVWDRTQGRQNVKAIASLGSMPNYLLSNNPAVKT 135 Query: 144 IKDFSDKDRIAVPAAGVGFQSRTLQIETAKVFGKEDFKRFDRISVSLSHPDATAALIAGG 203 I+D SDKDRIAVPAAGVGFQSRTLQIETAK++G EDFKRFD+ISVSL HPDA+AALIAGG Sbjct: 136 IRDLSDKDRIAVPAAGVGFQSRTLQIETAKLYGAEDFKRFDKISVSLPHPDASAALIAGG 195 Query: 204 SEINAHFSSPPFQYQALENKNVHKVISSYDIMGGPATFNVLYTTQKFHDENPKTYRAFYK 263 SEINAHFSSPPFQYQALE+ NVHK++SSYD++GG ATFNVLYTTQKFHDENPKTYRAFY Sbjct: 196 SEINAHFSSPPFQYQALEHANVHKILSSYDVLGGQATFNVLYTTQKFHDENPKTYRAFYD 255 Query: 264 ALVEAAEFVRNNKAKAADTFIRVQKSKLSPAFVRKIVEDPEINFTVSPERTFVYAEQLHA 323 AL EA++ V+ +KA AA+T+IRV+KSKL P V++IV DPEI+FT+ PERT+VYAE+L Sbjct: 256 ALKEASQIVKADKAAAAETYIRVEKSKLDPELVKRIVADPEIDFTIIPERTYVYAEKLQQ 315 Query: 324 LGVLKNRASSWKDYFFEEAYAQPGS 348 LGVLKN+A+SWKDYFF E + QPGS Sbjct: 316 LGVLKNKATSWKDYFFAEIHDQPGS 340 >ref|YP_272626.1| ABC transporter periplasmic substrate-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] ref|ZP_06458044.1| sulfonate/nitrate/taurine transport system substrate-binding protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] ref|ZP_06481587.1| sulfonate/nitrate/taurine transport system substrate-binding protein [Pseudomonas syringae pv. aesculi str. 2250] gb|AAZ37684.1| ABC transporter, periplasmic substrate-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gb|EGH00358.1| sulfonate/nitrate/taurine transport system substrate-binding protein [Pseudomonas syringae pv. aesculi str. 0893_23] gb|EGH20005.1| sulfonate/nitrate/taurine transport system substrate-binding protein [Pseudomonas syringae pv. mori str. 301020] gb|EGH84868.1| sulfonate/nitrate/taurine transport system substrate-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 339 Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats. Identities = 246/334 (73%), Positives = 291/334 (87%), Gaps = 3/334 (0%) Query: 18 YKPFAAMLAGVIALGSA---ASVHAEGTIRIAQQFGIGYLILDVVQDQKLIEKYGKQEGV 74 ++P +LA + L A + V AEG I IAQQFGIGYLILDVV+DQKLIEK+GK++G+ Sbjct: 6 HRPALTVLAATLGLFGALLSSGVQAEGKISIAQQFGIGYLILDVVRDQKLIEKHGKEQGL 65 Query: 75 DIKVEWTSLSGATGMNEALLAGALDVVSAGAPPALVLWDRTRGRQNVKAIASLGSMPNYL 134 DIKV+W S+SGAT MNEALLAGALDVVSAG PP L +WDRT+G+QNVKAIASLGSMPNYL Sbjct: 66 DIKVDWNSISGATAMNEALLAGALDVVSAGVPPMLTVWDRTKGKQNVKAIASLGSMPNYL 125 Query: 135 LSNNPKVRTIKDFSDKDRIAVPAAGVGFQSRTLQIETAKVFGKEDFKRFDRISVSLSHPD 194 L+NNP V+TIKDF+DKDRIAVPAAGVGFQSRTLQIETAKVFG +++K+FD ISVSL+HPD Sbjct: 126 LTNNPNVKTIKDFTDKDRIAVPAAGVGFQSRTLQIETAKVFGNDNYKKFDNISVSLAHPD 185 Query: 195 ATAALIAGGSEINAHFSSPPFQYQALENKNVHKVISSYDIMGGPATFNVLYTTQKFHDEN 254 ATAAL+AGGSEIN+HFSSPPFQYQALEN NVHKV+SSYD++GG ATFNVLYTT+KFHDEN Sbjct: 186 ATAALLAGGSEINSHFSSPPFQYQALENPNVHKVLSSYDVLGGQATFNVLYTTEKFHDEN 245 Query: 255 PKTYRAFYKALVEAAEFVRNNKAKAADTFIRVQKSKLSPAFVRKIVEDPEINFTVSPERT 314 PKTY+AFY AL EA + ++ +K AA T+IRV++SKL V KIV DPEI+FTV+P+RT Sbjct: 246 PKTYKAFYDALAEAEKIIKADKPAAAQTYIRVEQSKLPLPLVEKIVADPEIDFTVTPQRT 305 Query: 315 FVYAEQLHALGVLKNRASSWKDYFFEEAYAQPGS 348 F+YAE+LH LGVLKN+A+SWKDYFFEEA+ GS Sbjct: 306 FIYAEKLHELGVLKNKAASWKDYFFEEAHGTEGS 339 >ref|YP_003016981.1| ABC transporter periplasmic binding protein [Pectobacterium carotovorum subsp. carotovorum PC1] gb|ACT12445.1| ABC transporter periplasmic binding protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 341 Score = 501 bits (1290), Expect = e-140, Method: Composition-based stats. Identities = 245/325 (75%), Positives = 289/325 (88%), Gaps = 1/325 (0%) Query: 25 LAGVIALG-SAASVHAEGTIRIAQQFGIGYLILDVVQDQKLIEKYGKQEGVDIKVEWTSL 83 LA +I L +A AEG+I IAQQFGIGYLILDVV+DQ LIEK+GKQ+G+DIKV+W +L Sbjct: 17 LAALIGLTLTAFGASAEGSISIAQQFGIGYLILDVVRDQNLIEKHGKQQGLDIKVDWRTL 76 Query: 84 SGATGMNEALLAGALDVVSAGAPPALVLWDRTRGRQNVKAIASLGSMPNYLLSNNPKVRT 143 SGAT +NEALL+GALDV SAG PP L +WDRT+GRQNVKAIASLGSMPNYLLSNNP V++ Sbjct: 77 SGATAINEALLSGALDVASAGVPPMLTVWDRTQGRQNVKAIASLGSMPNYLLSNNPAVKS 136 Query: 144 IKDFSDKDRIAVPAAGVGFQSRTLQIETAKVFGKEDFKRFDRISVSLSHPDATAALIAGG 203 I+D SDKDRIAVPAAGVGFQSRTLQIETAK++G EDFKRFD+ISVSL HPDA+AALIAGG Sbjct: 137 IRDLSDKDRIAVPAAGVGFQSRTLQIETAKLYGAEDFKRFDKISVSLPHPDASAALIAGG 196 Query: 204 SEINAHFSSPPFQYQALENKNVHKVISSYDIMGGPATFNVLYTTQKFHDENPKTYRAFYK 263 SEINAHFSSPPFQYQALE+ NVHK++SSYD++GG ATFNVLYTTQKFHDENPKTYRAFY+ Sbjct: 197 SEINAHFSSPPFQYQALEHANVHKILSSYDVLGGQATFNVLYTTQKFHDENPKTYRAFYE 256 Query: 264 ALVEAAEFVRNNKAKAADTFIRVQKSKLSPAFVRKIVEDPEINFTVSPERTFVYAEQLHA 323 AL EA++ ++ +K AA+T+IRV+KSKL P V++IV DPEI+FT++PERT+VYAE+L Sbjct: 257 ALKEASQIIKADKVAAAETYIRVEKSKLDPELVKRIVADPEIDFTITPERTYVYAEKLQQ 316 Query: 324 LGVLKNRASSWKDYFFEEAYAQPGS 348 LGVLKN+A+SWKDYFF E + QPGS Sbjct: 317 LGVLKNKAASWKDYFFAEIHDQPGS 341