BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0026.p         (105 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003778172.1| hypothetical protein Hsero_4803 [Herbaspiril...   156   9e-37
ref|YP_004755068.1| hypothetical protein CFU_4424 [Collimonas fu...    71   7e-11
ref|ZP_08274933.1| hypothetical protein IMCC9480_3684 [Oxalobact...    55   5e-06

>ref|YP_003778172.1| hypothetical protein Hsero_4803 [Herbaspirillum seropedicae SmR1]
 gb|ADJ66264.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 105

 Score =  156 bits (395), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 99/105 (94%), Positives = 103/105 (98%)

Query: 1   MSFLNLAFPAEAALPFAQTLIGMLAAYVRPALGLGALVTLVMVFKPLILGLAQAAVLLVK 60
           MSFLNLAFPAEAA+PFAQTLIGMLAAYVRPALGLGALVT VMVFKPLILGLAQAAVLLVK
Sbjct: 1   MSFLNLAFPAEAAMPFAQTLIGMLAAYVRPALGLGALVTFVMVFKPLILGLAQAAVLLVK 60

Query: 61  PRKSLEQRILAHKFSGKMMLNRMANEYSLSQPSFAAELRNMAARD 105
           PRKSLEQRILAHKFSGK MLNRMANEYS++QP+FAAELRNMAARD
Sbjct: 61  PRKSLEQRILAHKFSGKRMLNRMANEYSMTQPNFAAELRNMAARD 105


>ref|YP_004755068.1| hypothetical protein CFU_4424 [Collimonas fungivorans Ter331]
 gb|AEK64245.1| hypothetical protein CFU_4424 [Collimonas fungivorans Ter331]
          Length = 126

 Score = 70.9 bits (172), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 58/105 (55%), Positives = 76/105 (72%)

Query: 1   MSFLNLAFPAEAALPFAQTLIGMLAAYVRPALGLGALVTLVMVFKPLILGLAQAAVLLVK 60
           MS    A PAE AL  A  L+   AA +RP LGLGAL TL++ FKPL +G+ +AA++L+K
Sbjct: 22  MSVFAFALPAEIALFDASALLAAAAAALRPLLGLGALATLMVYFKPLWMGILRAALMLIK 81

Query: 61  PRKSLEQRILAHKFSGKMMLNRMANEYSLSQPSFAAELRNMAARD 105
           PRKSLEQRI   KF G+ ++ RMAN+++ SQP+ AAELR +A RD
Sbjct: 82  PRKSLEQRIARSKFRGQQLIRRMANDHASSQPNLAAELRLLAGRD 126


>ref|ZP_08274933.1| hypothetical protein IMCC9480_3684 [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF31607.1| hypothetical protein IMCC9480_3684 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 59

 Score = 54.7 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/59 (49%), Positives = 44/59 (74%)

Query: 47  LILGLAQAAVLLVKPRKSLEQRILAHKFSGKMMLNRMANEYSLSQPSFAAELRNMAARD 105
           ++LG A+A+ + +KPRKSLEQR +     G ++LNRMA +  +SQP+ A+ELR +A+RD
Sbjct: 1   MLLGFARASFVALKPRKSLEQRSIRSHLRGMLILNRMAQDLEISQPNMASELRAVASRD 59