BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0024.p (466 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773439.1| chromosomal replication initiator protein [H... 903 0.0 ref|YP_001098370.1| chromosomal replication initiation protein [... 793 0.0 ref|ZP_08273137.1| Chromosomal replication initiator protein Dna... 787 0.0 ref|YP_001351691.1| chromosomal replication initiation protein [... 785 0.0 ref|YP_004750663.1| chromosomal replication initiator protein [C... 781 0.0 >ref|YP_003773439.1| chromosomal replication initiator protein [Herbaspirillum seropedicae SmR1] gb|ADJ61531.1| chromosomal replication initiator protein [Herbaspirillum seropedicae SmR1] Length = 465 Score = 903 bits (2334), Expect = 0.0, Method: Composition-based stats. Identities = 452/466 (96%), Positives = 456/466 (97%), Gaps = 1/466 (0%) Query: 1 MENFWQACSHKLEQELTPQQYSAWIKPLVPLDFEDGLLRIAAPNRFKLDWVKTQFANRIT 60 MENFWQACS KLEQELTPQQYSAWIKPLVPLD+EDGLLR+AAPNRFKLDWVKTQFANRIT Sbjct: 1 MENFWQACSQKLEQELTPQQYSAWIKPLVPLDYEDGLLRVAAPNRFKLDWVKTQFANRIT 60 Query: 61 ALACEFWDAPTEVQFVLDPRGNQGRRPAANAQANGGGASGLGLPNHEQLHLDPEPAQPVR 120 ALACE+WDAPTEVQFVLDPRGNQGRRPAA A A G + LPNHEQLHLDPEPAQPVR Sbjct: 61 ALACEYWDAPTEVQFVLDPRGNQGRRPAAAAAAGNGASGLG-LPNHEQLHLDPEPAQPVR 119 Query: 121 AVAPRQEQSRINPVLTFDNLVTGKANQLARAAATQVANNPGTSYNPLFLYGGVGLGKTHI 180 AVAPRQEQSRINPVLTFDNLVTGKANQLARAAATQVANNPGTSYNPLFLYGGVGLGKTHI Sbjct: 120 AVAPRQEQSRINPVLTFDNLVTGKANQLARAAATQVANNPGTSYNPLFLYGGVGLGKTHI 179 Query: 181 IHAIGNQVLVDNPGAKIRYIHAEQYVRDVVTAYQRKGFDDFKRYYHSLDLLLIDDIQFFG 240 IHAIGNQVLVDNPGAKIRYIHAEQYVRDVVTAYQRKGFDDFKRYYHSLDLLLIDDIQFFG Sbjct: 180 IHAIGNQVLVDNPGAKIRYIHAEQYVRDVVTAYQRKGFDDFKRYYHSLDLLLIDDIQFFG 239 Query: 241 GKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEISGMDDRLISRFDSGLTVAIEPPELEM 300 GKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEISGMDDRLISRFDSGLTVAIEPPELEM Sbjct: 240 GKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEISGMDDRLISRFDSGLTVAIEPPELEM 299 Query: 301 RVAILMKKASAEDVVLSDDVAFFVAKHLRSNVRELEGALRKILAYSRFHGKDITIDVVKE 360 RVAILMKKASAEDVVLSDDVAFFVAKHLRSNVRELEGALRKILAYSRFHGKDITIDVVKE Sbjct: 300 RVAILMKKASAEDVVLSDDVAFFVAKHLRSNVRELEGALRKILAYSRFHGKDITIDVVKE 359 Query: 361 ALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANIARPRQIAMYLAKELTQKS 420 ALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANIARPRQIAMYLAKELTQKS Sbjct: 360 ALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANIARPRQIAMYLAKELTQKS 419 Query: 421 LPEIGDLFGGRDHTTVLHAVRKIAADRAKSPECNHELHVLEQTLKG 466 LPEIGDLFGGRDHTTVLHAVRKIAADRAKSPECNHELHVLEQTLKG Sbjct: 420 LPEIGDLFGGRDHTTVLHAVRKIAADRAKSPECNHELHVLEQTLKG 465 >ref|YP_001098370.1| chromosomal replication initiation protein [Herminiimonas arsenicoxydans] sp|A4G154|DNAA_HERAR RecName: Full=Chromosomal replication initiator protein DnaA emb|CAL60241.1| Chromosomal replication initiator protein DnaA [Herminiimonas arsenicoxydans] Length = 460 Score = 793 bits (2049), Expect = 0.0, Method: Composition-based stats. Identities = 397/466 (85%), Positives = 420/466 (90%), Gaps = 6/466 (1%) Query: 1 MENFWQACSHKLEQELTPQQYSAWIKPLVPLDFEDGLLRIAAPNRFKLDWVKTQFANRIT 60 MENFWQACS +LEQELTPQQYSAWIKPL PLD+EDG LRIAAPNRFKLDWVKTQFA+RIT Sbjct: 1 MENFWQACSAQLEQELTPQQYSAWIKPLTPLDYEDGTLRIAAPNRFKLDWVKTQFASRIT 60 Query: 61 ALACEFWDAPTEVQFVLDPRGNQGRRPAANAQANGGGASGLGLPNHEQLHLDPEPAQPVR 120 ++A +FW+ P EVQFVLDPR RRPAA A A + P++ L+P P+ Sbjct: 61 SIAAQFWEVPVEVQFVLDPRLVAARRPAAQASVVSDRADDV--PSNV---LEPIPSNATD 115 Query: 121 AVAPRQEQSRINPVLTFDNLVTGKANQLARAAATQVANNPGTSYNPLFLYGGVGLGKTHI 180 PR++QSRIN LTFD+ VTGKANQLARAAA QVANNPG+SYNPLFLYGGVGLGKTH+ Sbjct: 116 HT-PRRDQSRINTALTFDSFVTGKANQLARAAAIQVANNPGSSYNPLFLYGGVGLGKTHL 174 Query: 181 IHAIGNQVLVDNPGAKIRYIHAEQYVRDVVTAYQRKGFDDFKRYYHSLDLLLIDDIQFFG 240 IHAIGNQVL DNP KIRYIHAEQYVRDVVTAYQRKGFDDFKRYYHSLDLLLIDDIQFFG Sbjct: 175 IHAIGNQVLADNPNVKIRYIHAEQYVRDVVTAYQRKGFDDFKRYYHSLDLLLIDDIQFFG 234 Query: 241 GKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEISGMDDRLISRFDSGLTVAIEPPELEM 300 GKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEI+GMDDRLISRFDSGLTVA+EPPELEM Sbjct: 235 GKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEITGMDDRLISRFDSGLTVAVEPPELEM 294 Query: 301 RVAILMKKASAEDVVLSDDVAFFVAKHLRSNVRELEGALRKILAYSRFHGKDITIDVVKE 360 RVAIL+KKA E V SDDVAFFVAKHLRSNVRELEGALRKILAYSRFHGKDITI+VVK+ Sbjct: 295 RVAILLKKAVQEGVTFSDDVAFFVAKHLRSNVRELEGALRKILAYSRFHGKDITIEVVKD 354 Query: 361 ALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANIARPRQIAMYLAKELTQKS 420 ALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANIARPRQIAMYLAKELTQKS Sbjct: 355 ALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANIARPRQIAMYLAKELTQKS 414 Query: 421 LPEIGDLFGGRDHTTVLHAVRKIAADRAKSPECNHELHVLEQTLKG 466 LPEIG+LFGGRDHTTVLHAVRKIAADR KSPECNHELHVLEQTLKG Sbjct: 415 LPEIGELFGGRDHTTVLHAVRKIAADRGKSPECNHELHVLEQTLKG 460 >ref|ZP_08273137.1| Chromosomal replication initiator protein DnaA [Oxalobacteraceae bacterium IMCC9480] gb|EGF33394.1| Chromosomal replication initiator protein DnaA [Oxalobacteraceae bacterium IMCC9480] Length = 464 Score = 787 bits (2032), Expect = 0.0, Method: Composition-based stats. Identities = 389/470 (82%), Positives = 422/470 (89%), Gaps = 10/470 (2%) Query: 1 MENFWQACSHKLEQELTPQQYSAWIKPLVPLDFEDGLLRIAAPNRFKLDWVKTQFANRIT 60 M+NFWQ CS +LEQELTPQQ+SAWIKPLVPLD+E+G LRIAAPNRFKLDWVKTQFANRIT Sbjct: 1 MDNFWQTCSAQLEQELTPQQFSAWIKPLVPLDYEEGRLRIAAPNRFKLDWVKTQFANRIT 60 Query: 61 ALACEFWDAPTEVQFVLDPRGNQGRRPAAN----AQANGGGASGLGLPNHEQLHLDPEPA 116 LA ++W+ P +VQFVLDPR N R+P A A+A G G +G+ + L P + Sbjct: 61 VLAGQYWEEPIDVQFVLDPRLNAPRKPTAAMPVAARAEGNGINGMSASVGGLIDLPPVDS 120 Query: 117 QPVRAVAPRQEQSRINPVLTFDNLVTGKANQLARAAATQVANNPGTSYNPLFLYGGVGLG 176 APR++QSR+N LTFD+ VTGKANQLARAAA QVA+NPG SYNPLFLYGGVGLG Sbjct: 121 ------APRRDQSRVNTALTFDSFVTGKANQLARAAAIQVADNPGVSYNPLFLYGGVGLG 174 Query: 177 KTHIIHAIGNQVLVDNPGAKIRYIHAEQYVRDVVTAYQRKGFDDFKRYYHSLDLLLIDDI 236 KTH++HAIGNQV+ DNP AKIRYIHAEQYVRDVVTAYQRKGFDDFKRYYHSLD+LLIDDI Sbjct: 175 KTHLVHAIGNQVMADNPSAKIRYIHAEQYVRDVVTAYQRKGFDDFKRYYHSLDVLLIDDI 234 Query: 237 QFFGGKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEISGMDDRLISRFDSGLTVAIEPP 296 QFFGGKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEI+GMDDRLISRFDSGLTVA+EPP Sbjct: 235 QFFGGKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEITGMDDRLISRFDSGLTVAVEPP 294 Query: 297 ELEMRVAILMKKASAEDVVLSDDVAFFVAKHLRSNVRELEGALRKILAYSRFHGKDITID 356 ELEMRVAIL+KKA+ E V SDDVAFFVAKHLRSNVRELEGALRKILA+SRFHGKDITI+ Sbjct: 295 ELEMRVAILLKKAAQEGVNFSDDVAFFVAKHLRSNVRELEGALRKILAFSRFHGKDITIE 354 Query: 357 VVKEALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANIARPRQIAMYLAKEL 416 VVK+ALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANIARPRQIAMYLAKEL Sbjct: 355 VVKDALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANIARPRQIAMYLAKEL 414 Query: 417 TQKSLPEIGDLFGGRDHTTVLHAVRKIAADRAKSPECNHELHVLEQTLKG 466 TQKSLPEIG+LFGGRDHTTVLHAVRKI ADR+KSPECNHELHVLEQTLKG Sbjct: 415 TQKSLPEIGELFGGRDHTTVLHAVRKIGADRSKSPECNHELHVLEQTLKG 464 >ref|YP_001351691.1| chromosomal replication initiation protein [Janthinobacterium sp. Marseille] sp|A6STW2|DNAA_JANMA RecName: Full=Chromosomal replication initiator protein DnaA gb|ABR89537.1| chromosomal replication initiator protein DnaA [Janthinobacterium sp. Marseille] Length = 460 Score = 785 bits (2028), Expect = 0.0, Method: Composition-based stats. Identities = 393/471 (83%), Positives = 417/471 (88%), Gaps = 16/471 (3%) Query: 1 MENFWQACSHKLEQELTPQQYSAWIKPLVPLDFEDGLLRIAAPNRFKLDWVKTQFANRIT 60 MENFWQ CS +LEQELTPQQYSAWIKPL PLD+EDG LRIAAPNRFKLDWVKTQFA RIT Sbjct: 1 MENFWQTCSAQLEQELTPQQYSAWIKPLAPLDYEDGTLRIAAPNRFKLDWVKTQFAGRIT 60 Query: 61 ALACEFWDAPTEVQFVLDPRGNQGRRPAANA-----QANGGGASGLGLPNHEQLHLDPEP 115 ++A +FWD P +VQFVLDPR ++P +A Q++ AS L+P P Sbjct: 61 SIAAQFWDMPVDVQFVLDPRLASAKKPTTSASVAPIQSDDVPAS----------VLEPIP 110 Query: 116 AQPVRAVAPRQEQSRINPVLTFDNLVTGKANQLARAAATQVANNPGTSYNPLFLYGGVGL 175 + PR++QSRIN LTFD+ VTGKANQLARAAA QVANNPG+SYNPLFLYGGVGL Sbjct: 111 SNATDHT-PRRDQSRINTALTFDSFVTGKANQLARAAAIQVANNPGSSYNPLFLYGGVGL 169 Query: 176 GKTHIIHAIGNQVLVDNPGAKIRYIHAEQYVRDVVTAYQRKGFDDFKRYYHSLDLLLIDD 235 GKTH+IHAIGNQVL DNP KIRYIHAEQYVRDVVTAYQRKGFDDFKRYYHSLDLLLIDD Sbjct: 170 GKTHLIHAIGNQVLADNPDVKIRYIHAEQYVRDVVTAYQRKGFDDFKRYYHSLDLLLIDD 229 Query: 236 IQFFGGKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEISGMDDRLISRFDSGLTVAIEP 295 IQFFGGKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEI+GMDDRLISRFDSGLTVA+EP Sbjct: 230 IQFFGGKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEITGMDDRLISRFDSGLTVAVEP 289 Query: 296 PELEMRVAILMKKASAEDVVLSDDVAFFVAKHLRSNVRELEGALRKILAYSRFHGKDITI 355 PELEMRVAIL+KKA E V SDDVAFFVAKHLRSNVRELEGALRKILAYSRFHGKDITI Sbjct: 290 PELEMRVAILLKKAVQEGVTFSDDVAFFVAKHLRSNVRELEGALRKILAYSRFHGKDITI 349 Query: 356 DVVKEALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANIARPRQIAMYLAKE 415 +VVK+ALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANIARPRQIAMYLAKE Sbjct: 350 EVVKDALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANIARPRQIAMYLAKE 409 Query: 416 LTQKSLPEIGDLFGGRDHTTVLHAVRKIAADRAKSPECNHELHVLEQTLKG 466 LTQKSLPEIG+LFGGRDHTTVLHAVRKIAADR KSPECNHELHVLEQTLKG Sbjct: 410 LTQKSLPEIGELFGGRDHTTVLHAVRKIAADRGKSPECNHELHVLEQTLKG 460 >ref|YP_004750663.1| chromosomal replication initiator protein [Collimonas fungivorans Ter331] gb|AEK59840.1| chromosomal replication initiator protein [Collimonas fungivorans Ter331] Length = 476 Score = 781 bits (2017), Expect = 0.0, Method: Composition-based stats. Identities = 391/481 (81%), Positives = 420/481 (87%), Gaps = 20/481 (4%) Query: 1 MENFWQACSHKLEQELTPQQYSAWIKPLVPLDFEDGLLRIAAPNRFKLDWVKTQFANRIT 60 MENFWQ+CS +LEQELTPQQ+SAWIKPL PLD+EDG LRIAAPNRFKLDWVKTQFA+RIT Sbjct: 1 MENFWQSCSTQLEQELTPQQFSAWIKPLAPLDYEDGRLRIAAPNRFKLDWVKTQFASRIT 60 Query: 61 ALACEFWDAPTEVQFVLDPR---------------GNQGRRPAANAQANGGGASGLGLPN 105 LA ++W+AP EV FVLDPR N + A + A GGG+ G N Sbjct: 61 TLAHQYWEAPIEVVFVLDPRKSAPAPASSSMPVAINNSNEQAGAQSSAAGGGS--YGNSN 118 Query: 106 HEQLHLDPEPAQPVRAVAPRQEQSRINPVLTFDNLVTGKANQLARAAATQVANNPGTSYN 165 ++L PE + R++QSRIN L+FD+ VTGKANQLARAAA QVANNPG SYN Sbjct: 119 FDRL---PEVQTENSTASARRDQSRINTALSFDSFVTGKANQLARAAAIQVANNPGVSYN 175 Query: 166 PLFLYGGVGLGKTHIIHAIGNQVLVDNPGAKIRYIHAEQYVRDVVTAYQRKGFDDFKRYY 225 PLFLYGGVGLGKTH+IHAIGNQ+L DNP +KIRYIHAEQYVRDVVTAYQRKGFDDFKRYY Sbjct: 176 PLFLYGGVGLGKTHLIHAIGNQLLADNPNSKIRYIHAEQYVRDVVTAYQRKGFDDFKRYY 235 Query: 226 HSLDLLLIDDIQFFGGKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEISGMDDRLISRF 285 HSLDLLLIDDIQFFGGKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEI+GMDDRLISRF Sbjct: 236 HSLDLLLIDDIQFFGGKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEITGMDDRLISRF 295 Query: 286 DSGLTVAIEPPELEMRVAILMKKASAEDVVLSDDVAFFVAKHLRSNVRELEGALRKILAY 345 DSGLTVAIEPPELEMRVAIL+KKA++E V SDDVAFFVAKHLRSNVRELEGALRKILAY Sbjct: 296 DSGLTVAIEPPELEMRVAILLKKAASEGVTFSDDVAFFVAKHLRSNVRELEGALRKILAY 355 Query: 346 SRFHGKDITIDVVKEALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANIARP 405 SRFHGKDI+IDVVK+ALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANIARP Sbjct: 356 SRFHGKDISIDVVKDALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANIARP 415 Query: 406 RQIAMYLAKELTQKSLPEIGDLFGGRDHTTVLHAVRKIAADRAKSPECNHELHVLEQTLK 465 RQIAMYLAKELTQKSLPEIG+LFGGRDHTTVLHAVRKIA DR K+PECNHELHVLEQTLK Sbjct: 416 RQIAMYLAKELTQKSLPEIGELFGGRDHTTVLHAVRKIAGDRTKNPECNHELHVLEQTLK 475 Query: 466 G 466 G Sbjct: 476 G 476