BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0017.p (401 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773490.1| threonine dehydratase [Herbaspirillum serope... 675 0.0 ref|YP_004152507.1| threonine dehydratase [Variovorax paradoxus ... 575 e-162 ref|YP_002942078.1| threonine dehydratase [Variovorax paradoxus ... 570 e-160 ref|ZP_04762890.1| threonine dehydratase [Acidovorax delafieldii... 557 e-156 ref|YP_968528.1| threonine dehydratase [Acidovorax citrulli AAC0... 553 e-155 >ref|YP_003773490.1| threonine dehydratase [Herbaspirillum seropedicae SmR1] gb|ADJ61582.1| threonine dehydratase protein [Herbaspirillum seropedicae SmR1] Length = 401 Score = 675 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 396/401 (98%), Positives = 398/401 (99%) Query: 1 MTTLNDIEAAALRLQGQILETPCVESRTLSQIVGAQVFLKFENLQFTASFKERGACNKMV 60 MTTLNDIEAAA RLQGQILETPCVESRTLSQIVGAQVFLKFENLQFTASFKERGACNK+V Sbjct: 1 MTTLNDIEAAARRLQGQILETPCVESRTLSQIVGAQVFLKFENLQFTASFKERGACNKLV 60 Query: 61 DVAASEGGARGVVAMSAGNHAQGVAYHAQRLGLPATIVMPRFTPGVKIERTRGFGANVVL 120 DVAAS GGARGVVAMSAGNHAQGVAYHAQRLGLPATIVMPRFTPGVKIERTRGFGANVVL Sbjct: 61 DVAASGGGARGVVAMSAGNHAQGVAYHAQRLGLPATIVMPRFTPGVKIERTRGFGANVVL 120 Query: 121 HGDTLEAARTHAYELAEKEGLTFVHPYDDEAIIAGQGTVALEMMKAVPDLDCLVVSIGGG 180 HGDTLEAARTHAYELAEKEGLTFVHPYDDEAIIAGQGTVALEMMKAVPDLDCLVVSIGGG Sbjct: 121 HGDTLEAARTHAYELAEKEGLTFVHPYDDEAIIAGQGTVALEMMKAVPDLDCLVVSIGGG 180 Query: 181 GLLAGMAVAARAIKPEIEIVGVQTRRFPTMFNAVKGTEHPVGASTIAEGIAVGTPGTLTR 240 GLLAGMAVAARAIKPEIEIVGVQTRRFPTM NAVKGTEHPVGASTIAEGIAVGTPGTLTR Sbjct: 181 GLLAGMAVAARAIKPEIEIVGVQTRRFPTMVNAVKGTEHPVGASTIAEGIAVGTPGTLTR 240 Query: 241 AIIAREADELLLVDEGDIEQAVLMLLEIEKTLVEGAGAAGLAALVRYPDRFRGKRVGLVL 300 AIIAREADELLLVDEGDIEQAVLMLLEIEKTLVEGAGAAGLAALVRYPDRFRGKRVGLVL Sbjct: 241 AIIAREADELLLVDEGDIEQAVLMLLEIEKTLVEGAGAAGLAALVRYPDRFRGKRVGLVL 300 Query: 301 SGGNIDPLLLTAIIERGMVRAGRLARVKVSSRDVPGTLARITGIVAEAGANIDEVHHQRA 360 SGGNIDPLLLTAIIERGMVRAGRLARVKVSSRDVPGTLARITGIVAEAGAN+DEVHHQRA Sbjct: 301 SGGNIDPLLLTAIIERGMVRAGRLARVKVSSRDVPGTLARITGIVAEAGANVDEVHHQRA 360 Query: 361 FTLLAAQNVDIELVLQTRGRPHLAQVLQALRAAGFEAEELH 401 FTLLAAQNVDIELVLQTRGRPHLAQVLQALRAAGFEAEELH Sbjct: 361 FTLLAAQNVDIELVLQTRGRPHLAQVLQALRAAGFEAEELH 401 >ref|YP_004152507.1| threonine dehydratase [Variovorax paradoxus EPS] gb|ADU34396.1| threonine dehydratase [Variovorax paradoxus EPS] Length = 402 Score = 575 bits (1481), Expect = e-162, Method: Composition-based stats. Identities = 329/401 (82%), Positives = 359/401 (89%), Gaps = 2/401 (0%) Query: 1 MTTLNDIEAAALRLQGQILETPCVESRTLSQIVGAQVFLKFENLQFTASFKERGACNKMV 60 M + +I AA+RLQGQ+L TPCVESRTLS+IVGAQVFLKFENLQFT+SFKERGACNK+V Sbjct: 4 MVGIEEIRRAAVRLQGQVLNTPCVESRTLSEIVGAQVFLKFENLQFTSSFKERGACNKLV 63 Query: 61 DVAASEGGARGVVAMSAGNHAQGVAYHAQRLGLPATIVMPRFTPGVKIERTRGFGANVVL 120 D+ SE G RGV+AMSAGNHAQGVAYHAQRLGL A IVMPRFTPGVKIERTRGFGA VVL Sbjct: 64 DL--SEAGTRGVIAMSAGNHAQGVAYHAQRLGLRALIVMPRFTPGVKIERTRGFGAEVVL 121 Query: 121 HGDTLEAARTHAYELAEKEGLTFVHPYDDEAIIAGQGTVALEMMKAVPDLDCLVVSIGGG 180 HGDTL+AAR HA ELAE+EGL FVHPYDDEAIIAGQGTVALEM+ AVPDLD LVV++GGG Sbjct: 122 HGDTLDAARAHALELAEREGLAFVHPYDDEAIIAGQGTVALEMLDAVPDLDTLVVAVGGG 181 Query: 181 GLLAGMAVAARAIKPEIEIVGVQTRRFPTMFNAVKGTEHPVGASTIAEGIAVGTPGTLTR 240 GL+AGMAVAAR KP IEIVGVQT RFP M NA+KGT H G STIAEGIAVGTPG LT+ Sbjct: 182 GLIAGMAVAARDRKPGIEIVGVQTTRFPGMVNAIKGTHHAQGKSTIAEGIAVGTPGVLTQ 241 Query: 241 AIIAREADELLLVDEGDIEQAVLMLLEIEKTLVEGAGAAGLAALVRYPDRFRGKRVGLVL 300 IIA + D+L+LVDEGDIEQ VLMLLEIEKTLVEGAGAAGLAAL+R+P+RF+GKRVGLVL Sbjct: 242 EIIASKVDDLVLVDEGDIEQGVLMLLEIEKTLVEGAGAAGLAALIRHPERFKGKRVGLVL 301 Query: 301 SGGNIDPLLLTAIIERGMVRAGRLARVKVSSRDVPGTLARITGIVAEAGANIDEVHHQRA 360 SGGNIDPLLL AIIERGMVRAGRLARV+VS+RDVPG+LA IT VAEAGAN+DEVHHQRA Sbjct: 302 SGGNIDPLLLAAIIERGMVRAGRLARVRVSARDVPGSLAEITATVAEAGANVDEVHHQRA 361 Query: 361 FTLLAAQNVDIELVLQTRGRPHLAQVLQALRAAGFEAEELH 401 FT+LAAQNVDIELVLQTRGR HLA VL AL+ AGFEAEE H Sbjct: 362 FTMLAAQNVDIELVLQTRGRAHLASVLTALKDAGFEAEEQH 402 >ref|YP_002942078.1| threonine dehydratase [Variovorax paradoxus S110] gb|ACS16812.1| threonine dehydratase [Variovorax paradoxus S110] Length = 409 Score = 570 bits (1469), Expect = e-160, Method: Composition-based stats. Identities = 329/406 (81%), Positives = 358/406 (88%), Gaps = 5/406 (1%) Query: 1 MTTLNDIEAAALRLQGQILETPCVESRTLSQIVGAQVFLKFENLQFTASFKERGACNKMV 60 M + +I AA RL+GQ+L TPCVESRTLS+IVGAQV+LKFENLQFT+SFKERGACNK+V Sbjct: 4 MVGIEEIRRAAARLEGQVLNTPCVESRTLSEIVGAQVYLKFENLQFTSSFKERGACNKLV 63 Query: 61 DVAASEG-----GARGVVAMSAGNHAQGVAYHAQRLGLPATIVMPRFTPGVKIERTRGFG 115 D+ ++ RGVVAMSAGNHAQGVAYHAQRLGL A IVMPRFTPGVKIERTRGFG Sbjct: 64 DLLEADTRDGQEATRGVVAMSAGNHAQGVAYHAQRLGLRALIVMPRFTPGVKIERTRGFG 123 Query: 116 ANVVLHGDTLEAARTHAYELAEKEGLTFVHPYDDEAIIAGQGTVALEMMKAVPDLDCLVV 175 A VVLHGDTL+AAR HA ELAE+EGLTFVHPYDDEAIIAGQGTVALEM+ AVPDLD LVV Sbjct: 124 AEVVLHGDTLDAARAHALELAEREGLTFVHPYDDEAIIAGQGTVALEMLDAVPDLDTLVV 183 Query: 176 SIGGGGLLAGMAVAARAIKPEIEIVGVQTRRFPTMFNAVKGTEHPVGASTIAEGIAVGTP 235 S+GGGGL+AGMA+AAR KP IEIVGVQT RFP M NAVKGT+H G STIAEGIAVGTP Sbjct: 184 SVGGGGLIAGMAIAARERKPGIEIVGVQTTRFPGMVNAVKGTQHLQGKSTIAEGIAVGTP 243 Query: 236 GTLTRAIIAREADELLLVDEGDIEQAVLMLLEIEKTLVEGAGAAGLAALVRYPDRFRGKR 295 G LTR IIA+ D+LLLVDEGDIEQ VLMLLEIEKTLVEGAGAAGLAAL+R+P RF+GKR Sbjct: 244 GVLTREIIAQHVDDLLLVDEGDIEQGVLMLLEIEKTLVEGAGAAGLAALIRHPARFKGKR 303 Query: 296 VGLVLSGGNIDPLLLTAIIERGMVRAGRLARVKVSSRDVPGTLARITGIVAEAGANIDEV 355 VGLVLSGGNIDPLLL AIIERGMVRAGRLARV+VS+RDVPG+LA+IT VAEAGAN+DEV Sbjct: 304 VGLVLSGGNIDPLLLAAIIERGMVRAGRLARVRVSARDVPGSLAQITATVAEAGANVDEV 363 Query: 356 HHQRAFTLLAAQNVDIELVLQTRGRPHLAQVLQALRAAGFEAEELH 401 HHQRAFT+LAAQNVDIELVLQTRGR HLA VL AL AGFEAEE H Sbjct: 364 HHQRAFTMLAAQNVDIELVLQTRGRAHLASVLGALHDAGFEAEEQH 409 >ref|ZP_04762890.1| threonine dehydratase [Acidovorax delafieldii 2AN] gb|EER60289.1| threonine dehydratase [Acidovorax delafieldii 2AN] Length = 402 Score = 557 bits (1436), Expect = e-156, Method: Composition-based stats. Identities = 313/397 (78%), Positives = 354/397 (89%), Gaps = 1/397 (0%) Query: 1 MTTLNDIEAAALRLQGQILETPCVESRTLSQIVGAQVFLKFENLQFTASFKERGACNKMV 60 M +L DI AA RL+GQ+L+TPCVESRTLS IVGAQVFLKFENLQFTASFKERGACNK+ Sbjct: 4 MLSLQDIRDAATRLRGQVLDTPCVESRTLSDIVGAQVFLKFENLQFTASFKERGACNKLT 63 Query: 61 DVAASEGGARGVVAMSAGNHAQGVAYHAQRLGLPATIVMPRFTPGVKIERTRGFGANVVL 120 + +E ARGVVAMSAGNHAQGVAYHAQRLGL A IVMPRFTPGVK+ERTRGFGA VVL Sbjct: 64 LLTPAER-ARGVVAMSAGNHAQGVAYHAQRLGLRAVIVMPRFTPGVKVERTRGFGAEVVL 122 Query: 121 HGDTLEAARTHAYELAEKEGLTFVHPYDDEAIIAGQGTVALEMMKAVPDLDCLVVSIGGG 180 HGDTLE AR HAY LA+ EGL FVHPYDDEA+ AGQGT+ LEM++AVPDLD LV+++GGG Sbjct: 123 HGDTLEEARAHAYRLADTEGLVFVHPYDDEAVAAGQGTLGLEMLQAVPDLDTLVIAVGGG 182 Query: 181 GLLAGMAVAARAIKPEIEIVGVQTRRFPTMFNAVKGTEHPVGASTIAEGIAVGTPGTLTR 240 GL+AG+A AA+A++P+IEI+GVQT RFP M NAVKGT HP G STIAEGIAVGTPGT+T+ Sbjct: 183 GLIAGVATAAKALRPDIEIIGVQTSRFPAMVNAVKGTHHPQGTSTIAEGIAVGTPGTITQ 242 Query: 241 AIIAREADELLLVDEGDIEQAVLMLLEIEKTLVEGAGAAGLAALVRYPDRFRGKRVGLVL 300 +I+ R D+L+LVDEGDIEQAVLMLLEIEKTLVEGAGAAGLAALVRYP+RF GK+VGLVL Sbjct: 243 SIVKRLVDDLVLVDEGDIEQAVLMLLEIEKTLVEGAGAAGLAALVRYPERFAGKKVGLVL 302 Query: 301 SGGNIDPLLLTAIIERGMVRAGRLARVKVSSRDVPGTLARITGIVAEAGANIDEVHHQRA 360 GGNIDPLLL AIIERGMVR+GRLAR+KVS+RD+PG LARIT VA+AGANI+EVHHQRA Sbjct: 303 CGGNIDPLLLAAIIERGMVRSGRLARIKVSARDIPGVLARITATVADAGANIEEVHHQRA 362 Query: 361 FTLLAAQNVDIELVLQTRGRPHLAQVLQALRAAGFEA 397 FT LAAQNV+IELVLQTRG+ H+AQVL+ LRAAG EA Sbjct: 363 FTTLAAQNVEIELVLQTRGKAHVAQVLEELRAAGMEA 399 >ref|YP_968528.1| threonine dehydratase [Acidovorax citrulli AAC00-1] gb|ABM30754.1| L-threonine ammonia-lyase [Acidovorax citrulli AAC00-1] Length = 402 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 322/400 (80%), Positives = 356/400 (89%), Gaps = 1/400 (0%) Query: 1 MTTLNDIEAAALRLQGQILETPCVESRTLSQIVGAQVFLKFENLQFTASFKERGACNKMV 60 M TL DI+AAA RLQGQ+L+TPCVESRTLSQIVGAQVFLKFENLQFTASFKERGACNK+ Sbjct: 4 MLTLPDIQAAAARLQGQVLDTPCVESRTLSQIVGAQVFLKFENLQFTASFKERGACNKLS 63 Query: 61 DVAASEGGARGVVAMSAGNHAQGVAYHAQRLGLPATIVMPRFTPGVKIERTRGFGANVVL 120 ++ E RGV+AMSAGNHAQGVAYHAQRLGL A IVMPRFTPGVK+ERTRGFGA VVL Sbjct: 64 QLSPEEQ-RRGVIAMSAGNHAQGVAYHAQRLGLAAVIVMPRFTPGVKVERTRGFGAEVVL 122 Query: 121 HGDTLEAARTHAYELAEKEGLTFVHPYDDEAIIAGQGTVALEMMKAVPDLDCLVVSIGGG 180 HGDTLE AR HAY LAE+ GLTFVHPYDDEA+ AGQGTV LEM++AVPDLDCL +++GGG Sbjct: 123 HGDTLEEARAHAYALAEERGLTFVHPYDDEAVAAGQGTVGLEMLQAVPDLDCLAIAVGGG 182 Query: 181 GLLAGMAVAARAIKPEIEIVGVQTRRFPTMFNAVKGTEHPVGASTIAEGIAVGTPGTLTR 240 GL+AG+A AA+A+KP IEI+GVQT RFP M NAVKGT+HP G STIAEGIAVGTPG +TR Sbjct: 183 GLIAGIATAAKALKPGIEIIGVQTSRFPAMVNAVKGTQHPQGTSTIAEGIAVGTPGQVTR 242 Query: 241 AIIAREADELLLVDEGDIEQAVLMLLEIEKTLVEGAGAAGLAALVRYPDRFRGKRVGLVL 300 +IAR D+LLLVDEGDIEQAVLMLLEIEKTLVEGAGAAGLAAL+R+P+RFRGKRVGLVL Sbjct: 243 EVIARLVDDLLLVDEGDIEQAVLMLLEIEKTLVEGAGAAGLAALLRHPERFRGKRVGLVL 302 Query: 301 SGGNIDPLLLTAIIERGMVRAGRLARVKVSSRDVPGTLARITGIVAEAGANIDEVHHQRA 360 GGNIDPLLL AIIERGMVR+GRLARVKVS+RD+PG LARIT VAEAGANI+EVHHQRA Sbjct: 303 CGGNIDPLLLAAIIERGMVRSGRLARVKVSARDIPGVLARITATVAEAGANIEEVHHQRA 362 Query: 361 FTLLAAQNVDIELVLQTRGRPHLAQVLQALRAAGFEAEEL 400 FT+LAAQNV+IELVLQTRGR H+ QVL LR A EAE L Sbjct: 363 FTMLAAQNVEIELVLQTRGREHVQQVLACLRQASMEAELL 402