BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0249.p (326 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_546135.1| hypothetical protein Mfla_2027 [Methylobacillus... 207 2e-51 ref|YP_004294361.1| peptidyl-prolyl cis-trans isomerase, EpsD fa... 197 3e-48 ref|YP_003166101.1| EpsD family peptidyl-prolyl cis-trans isomer... 161 2e-37 ref|YP_003775398.1| peptidyl/prolyl cis-trans isomerase [Herbasp... 142 5e-32 ref|YP_004040229.1| EpsD family peptidyl-prolyl cis-trans isomer... 140 3e-31 >ref|YP_546135.1| hypothetical protein Mfla_2027 [Methylobacillus flagellatus KT] gb|ABE50294.1| conserved hypothetical protein [Methylobacillus flagellatus KT] Length = 314 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 116/299 (38%), Positives = 179/299 (59%), Gaps = 17/299 (5%) Query: 12 KAVGIALLLTVVSLSACGDKEKNT--GKVLARVDGKPITAFQLETELKYAGGAKGMEQHP 69 K +AL++++ LS CGDK T + LARV+GK IT QL EL A Q Sbjct: 17 KGALVALMISI-GLSGCGDKSNETKASQSLARVNGKEITVHQLNEELARANVQPA--QKE 73 Query: 70 PVRGQALEALIDRQILLDEAMRNKLDRNPKLIQVVNRFKTQAIVQAYLESIEANRVKPSR 129 Q L++LIDRQ+L A++ K+DR+P ++Q + R K+Q I QAYL+S AN KP + Sbjct: 74 AATKQILQSLIDRQLLEQAALKAKVDRDPNVMQAIERAKSQMIAQAYLQSRVANIGKPDK 133 Query: 130 AEVDAYFKAHPELFANRKIFNIQQLSIVDRDLSLPLKTMMDSARSLDQIESWLKKHAIAY 189 EV+ ++K +P+LF+ RK+ ++Q+ I R ++ K+ + S ++L ++ +WL I Y Sbjct: 134 TEVENFYKQNPQLFSERKLVEMEQILIDSRYVNDEFKSALGSFKTLQEVAAWLDAKGIQY 193 Query: 190 DKGKLSYTSGELPPDVAERLQKLRHNRFFILKDGQRDRLCMLTEWKDSPVTEEIAYPQIE 249 D+G+++ + ELPP ++ERL+ R + F++ G R L ++ K+SPV+ A PQIE Sbjct: 194 DRGEVARSVAELPPQISERLKDARRGQLFVIGMGPRTMLVLMDSVKESPVSLADATPQIE 253 Query: 250 RYLLNKKMQEVSAAEIARLRSAAKIEYVEKPAALIVENTSTLVMTLPGQPKTAAANAPA 308 + LLNKK +E AEI RLR+ AKIEY++K A +P QP+ A + P+ Sbjct: 254 QMLLNKKRKEAGEAEIKRLRAEAKIEYLDKSA------------EVPQQPEKAEQSKPS 300 >ref|YP_004294361.1| peptidyl-prolyl cis-trans isomerase, EpsD family [Nitrosomonas sp. AL212] gb|ADZ26199.1| peptidyl-prolyl cis-trans isomerase, EpsD family [Nitrosomonas sp. AL212] Length = 322 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 104/263 (39%), Positives = 171/263 (65%), Gaps = 6/263 (2%) Query: 18 LLLTVVSLSACGDKEKNT---GKVLARVDGKPITAFQLETELKYAGGAKGMEQHPPVRGQ 74 + +TV++L+AC DKE NT G+ + V+G IT QL E++ + +Q+ R Q Sbjct: 15 VFITVLTLTAC-DKESNTKKSGQSIVSVNGSEITMLQLNDEIRRSNIR--ADQYESAREQ 71 Query: 75 ALEALIDRQILLDEAMRNKLDRNPKLIQVVNRFKTQAIVQAYLESIEANRVKPSRAEVDA 134 LE+LI RQ+++DEA+RNKLDR P+++Q R Q I QAYL+ I + KPS+AE++ Sbjct: 72 LLESLIARQLIVDEAIRNKLDRTPEVMQARERANAQVIAQAYLQGIISKIEKPSKAEIED 131 Query: 135 YFKAHPELFANRKIFNIQQLSIVDRDLSLPLKTMMDSARSLDQIESWLKKHAIAYDKGKL 194 YF+ +PELFA RK F++ + I D+S LK ++D+A+S++++ +WL K+ I Y + Sbjct: 132 YFQKNPELFAQRKQFDLTTVRIATSDVSEELKRVIDAAKSIEEVVTWLDKNKIQYFRTLA 191 Query: 195 SYTSGELPPDVAERLQKLRHNRFFILKDGQRDRLCMLTEWKDSPVTEEIAYPQIERYLLN 254 + +S +LP + L++ + +I+ + ++ L + K++ V+E A PQIER+L+N Sbjct: 192 TRSSADLPLQLVLMLREKSKDTIYIINEQEKSILISVNAIKNNSVSETAAAPQIERFLIN 251 Query: 255 KKMQEVSAAEIARLRSAAKIEYV 277 +K +E + AEI RLR++AKIEY+ Sbjct: 252 QKYKEATDAEITRLRTSAKIEYL 274 >ref|YP_003166101.1| EpsD family peptidyl-prolyl cis-trans isomerase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gb|ACV34172.1| peptidyl-prolyl cis-trans isomerase, EpsD family [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 320 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 100/302 (33%), Positives = 169/302 (55%), Gaps = 6/302 (1%) Query: 17 ALLLTVVSLSACG---DKEKNTGKVLARVDGKPITAFQLETELKYAGGAKGMEQHPPVRG 73 A ++ V++L+AC DK K+ +V A+V+G I+ Q+ L AG +Q G Sbjct: 14 ATIVMVLALTACSGKDDKTKSATQVAAKVNGGEISVHQINDVLARAGNVPA-DQARQASG 72 Query: 74 QALEALIDRQILLDEAMRNKLDRNPKLIQVVNRFKTQAIVQAYLESIEANRVKPSRAEVD 133 + LE LI +++LL EAM KLDR ++Q + K + + +AY++S+ A KP AEV Sbjct: 73 KVLEGLIGQELLLQEAMEKKLDRTAPVVQAIEAAKREILARAYVDSVTAQAGKPDAAEVH 132 Query: 134 AYFKAHPELFANRKIFNIQQLSIVDRDLSLP-LKTMMDSARSLDQIESWLKKHAIAYDKG 192 Y+ ++P LF+ R+I+NI +L + +P L+ +D A+SL+ + +WLK+ I ++ G Sbjct: 133 GYYASNPLLFSARRIYNINELGVAIAADKMPALQERVDRAKSLNDVAAWLKEQNIPFNAG 192 Query: 193 KLSYTSGELPPDVAERLQKLRHNRFFILKDGQRDRLCMLTEWKDSPVTEEIAYPQIERYL 252 + + +LP ++ + ++R + ++ + L +D PV E+ A P IE++L Sbjct: 193 SGAKGAEQLPLNLLPIVAEMRDGQIRLVTMPGGAAVLQLIASRDQPVDEQTARPAIEQFL 252 Query: 253 LNKKMQEVSAAEIARLRSAAKIEYV-EKPAALIVENTSTLVMTLPGQPKTAAANAPAVHA 311 NKK E++ E+ RLR+AAKIEY+ E A+ TS T P A+ +A A H Sbjct: 253 ANKKKSELAETEMKRLRAAAKIEYLGEFAASPGAPATSAQPATQPDAAPVASKDASAAHM 312 Query: 312 DR 313 ++ Sbjct: 313 EK 314 >ref|YP_003775398.1| peptidyl/prolyl cis-trans isomerase [Herbaspirillum seropedicae SmR1] gb|ADJ63490.1| peptidyl/prolyl cis-trans isomerase protein [Herbaspirillum seropedicae SmR1] Length = 304 Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 92/282 (32%), Positives = 158/282 (56%), Gaps = 13/282 (4%) Query: 28 CGDKEKN-TGKVLARVDGKPITAFQLETELKYAGGAKGMEQHPPVRGQALEALIDRQILL 86 CG +E+ +G+ LA VDGK IT QL EL GGA+ + Q L+ L+ RQ+L+ Sbjct: 30 CGKQEQAASGQALASVDGKEITIHQLNAELGK-GGAREANK------QVLDGLVARQVLV 82 Query: 87 DEAMRNKLDRNPKLIQVVNRFKTQAIVQAYLESIEANRVKPSRAEVDAYFKAHPELFANR 146 + A + KLD +P ++ + R + + Q+Y++ A +PS+ EV ++ HP+ FA R Sbjct: 83 NAARKEKLDADPAVLADMERARDLVLAQSYVQRKLAKPTRPSQQEVSTFYDQHPDWFAQR 142 Query: 147 KIFNIQQLSIVDRDLSLPLKTMMDSARSLDQIESWLKKHAIAYDKGKLSYTSGELPPDVA 206 + + +L I ++ L MM R L+++ +WL+K I + + +++ TS +LPP + Sbjct: 143 QQYEFAELVIDRASVNEELTKMMVGVRPLEEVAAWLQKQHIPFTRLQVTKTSMDLPPPML 202 Query: 207 ERLQKLRHNRFFILKDGQRDRLCMLTEWKDSPVTEEIAYPQIERYLLNKKMQEVSAAEIA 266 ++K+ + FI+ +G L L + ++ P++ A QIE+YL N++ E++ +A Sbjct: 203 AGVKKMEKGQLFIVNEGDAAILAALADVRNVPLSRAAATQQIEQYLANQRQGEITEQAVA 262 Query: 267 RLRSAAKIEYVEKPAALIVENTSTLV--MTLPGQPKTAAANA 306 RL++ AKI Y + A + +N+ V T PG K AAA A Sbjct: 263 RLKADAKIVYFDS-AKTLKDNSVAPVADATSPG--KDAAAGA 301 >ref|YP_004040229.1| EpsD family peptidyl-prolyl cis-trans isomerase [Methylovorus sp. MP688] gb|ADQ84993.1| peptidyl-prolyl cis-trans isomerase, EpsD family [Methylovorus sp. MP688] Length = 276 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 79/243 (32%), Positives = 138/243 (56%), Gaps = 6/243 (2%) Query: 38 VLARVDGKPITAFQLETELKYAGG--AKGMEQHPPVRGQALEALIDRQILLDEAMRNKLD 95 ++A+VDGK I+ QL +K + ++Q VR Q L+ LID+QI+L+ A+ K+D Sbjct: 1 MIAKVDGKEISLLQLNQAIKNVPNVNSSNVDQ---VRKQLLDKLIDQQIVLNVALEQKID 57 Query: 96 RNPKLIQVVNRFKTQAIVQAYLESIEANRVKPSRAEVDAYFKAHPELFANRKIFNIQQLS 155 R+ ++ + K + I +AYL ++ +R+KP+ +V YF HPELF+ RK++N+Q +S Sbjct: 58 RSADVVASIEAAKREIIARAYLTNLVTSRIKPTPQQVKQYFDTHPELFSERKVYNLQDIS 117 Query: 156 I-VDRDLSLPLKTMMDSARSLDQIESWLKKHAIAYDKGKLSYTSGELPPDVAERLQKLRH 214 + + ++S L ++S++SL I WLK + + S + ++P D L+ +R Sbjct: 118 LPAETEISPALTDKVNSSKSLQDIAEWLKTQNVKFGASSYSKPAEQMPLDALSTLKSMRD 177 Query: 215 NRFFILKDGQRDRLCMLTEWKDSPVTEEIAYPQIERYLLNKKMQEVSAAEIARLRSAAKI 274 +L + L +P++ E A P I+ YL+N + Q++ +EI RL+ AK+ Sbjct: 178 GSVSLLTMDGSHHIVRLVAAVSAPMSYEQAKPMIQMYLVNSEGQKLIKSEITRLKEKAKV 237 Query: 275 EYV 277 EYV Sbjct: 238 EYV 240