BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0224.p (218 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004752266.1| succinyl-CoA:3-ketoacid-coenzyme A transfera... 332 3e-89 ref|YP_001100086.1| acetyl-CoA:acetoacetyl-CoA transferase subun... 318 3e-85 ref|YP_003778011.1| acyl CoA:acetate/3-ketoacid CoA transferase ... 313 9e-84 ref|YP_001797808.1| 3-oxoacid CoA-transferase subunit B [Polynuc... 310 1e-82 ref|YP_583309.1| acetyl-CoA:acetoacetyl-CoA transferase, subunit... 310 1e-82 >ref|YP_004752266.1| succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B [Collimonas fungivorans Ter331] gb|AEK61443.1| Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B [Collimonas fungivorans Ter331] Length = 241 Score = 332 bits (850), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 165/196 (84%), Positives = 181/196 (92%), Gaps = 3/196 (1%) Query: 26 YVNLGIGLPTLVANHVPKDIEVWLQSENGLLGIGPFPTXDA---DLINAGKQTVTTIPGS 82 YVNLGIGLPTLVANHVP++IEVWLQSENGLLGIGPFPT DA DLINAGKQTVT++PGS Sbjct: 45 YVNLGIGLPTLVANHVPQEIEVWLQSENGLLGIGPFPTDDAVDPDLINAGKQTVTSLPGS 104 Query: 83 SFFASADSFGMIRGGKINIAILGAMQVSQQGDLANWMIPGKMVKGMGGAMDLVAGVGRVV 142 S+F+SADSF MIRGGKINIAILGAMQVSQ GDLANWMIPGKMVKGMGGAMDLVAGVGRVV Sbjct: 105 SYFSSADSFAMIRGGKINIAILGAMQVSQHGDLANWMIPGKMVKGMGGAMDLVAGVGRVV 164 Query: 143 VLMEHVAKGKDGSISQKILKQCNLPLTGVGVVNRIITDLGVIDVTPQGLKLIELATGVSK 202 VLMEHVAK KDGS S KIL+ CNLPLTGVGVVNRIITDLGV+D+TPQGLK++ELA GVS+ Sbjct: 165 VLMEHVAKSKDGSTSHKILEACNLPLTGVGVVNRIITDLGVLDITPQGLKVVELAPGVSQ 224 Query: 203 EDVIANTEAELDVSAV 218 +D+I T A LD+SA+ Sbjct: 225 QDIIEQTGAPLDLSAL 240 >ref|YP_001100086.1| acetyl-CoA:acetoacetyl-CoA transferase subunit beta [Herminiimonas arsenicoxydans] emb|CAL61961.1| Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (Succinyl CoA:3-oxoacid CoA-transferase) (OXCT B) [Herminiimonas arsenicoxydans] Length = 210 Score = 318 bits (816), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 157/196 (80%), Positives = 178/196 (90%), Gaps = 3/196 (1%) Query: 26 YVNLGIGLPTLVANHVPKDIEVWLQSENGLLGIGPFPTXDA---DLINAGKQTVTTIPGS 82 YVNLGIGLPTLVAN +P DI +WLQSENGLLGIGPFPT D DLINAGKQTVT +PG+ Sbjct: 14 YVNLGIGLPTLVANFIPADIHIWLQSENGLLGIGPFPTEDEVDPDLINAGKQTVTALPGA 73 Query: 83 SFFASADSFGMIRGGKINIAILGAMQVSQQGDLANWMIPGKMVKGMGGAMDLVAGVGRVV 142 S+F+SADSFGMIRGGKI+IA+LGAMQVS++GDLANWMIPGKMVKGMGGAMDLVAGV R+V Sbjct: 74 SYFSSADSFGMIRGGKIDIALLGAMQVSERGDLANWMIPGKMVKGMGGAMDLVAGVKRIV 133 Query: 143 VLMEHVAKGKDGSISQKILKQCNLPLTGVGVVNRIITDLGVIDVTPQGLKLIELATGVSK 202 VLMEHVA+ KDGSIS KIL C+LPLTGVGVV+RIITDLGVID+TP+GL+LIELA GV+K Sbjct: 134 VLMEHVARAKDGSISHKILSSCDLPLTGVGVVDRIITDLGVIDITPKGLRLIELAPGVTK 193 Query: 203 EDVIANTEAELDVSAV 218 E+V+ANT LDVSA+ Sbjct: 194 EEVVANTGVPLDVSAL 209 >ref|YP_003778011.1| acyl CoA:acetate/3-ketoacid CoA transferase subunit beta [Herbaspirillum seropedicae SmR1] emb|CAM32661.1| Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit protein [Herbaspirillum seropedicae] gb|ADJ66103.1| acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit protein [Herbaspirillum seropedicae SmR1] Length = 216 Score = 313 bits (803), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 173/194 (89%), Positives = 179/194 (92%), Gaps = 3/194 (1%) Query: 26 YVNLGIGLPTLVANHVPKDIEVWLQSENGLLGIGPFPTXDA---DLINAGKQTVTTIPGS 82 YVNLGIGLPTLVANHVP DIEVWLQSENGLLGIGPFPT D DLINAGKQTVTTIPGS Sbjct: 21 YVNLGIGLPTLVANHVPSDIEVWLQSENGLLGIGPFPTEDQVDPDLINAGKQTVTTIPGS 80 Query: 83 SFFASADSFGMIRGGKINIAILGAMQVSQQGDLANWMIPGKMVKGMGGAMDLVAGVGRVV 142 SFF+SADSFGMIRGGKINIAILGAMQVS +GDLANWMIPGKMVKGMGGAMDLVAGVGRVV Sbjct: 81 SFFSSADSFGMIRGGKINIAILGAMQVSAKGDLANWMIPGKMVKGMGGAMDLVAGVGRVV 140 Query: 143 VLMEHVAKGKDGSISQKILKQCNLPLTGVGVVNRIITDLGVIDVTPQGLKLIELATGVSK 202 VLMEHVAK KDGS S+KIL CNLPLTGVGVVNRIITDLGVIDVTP GLKLIELA+GV+K Sbjct: 141 VLMEHVAKAKDGSTSKKILNDCNLPLTGVGVVNRIITDLGVIDVTPGGLKLIELASGVTK 200 Query: 203 EDVIANTEAELDVS 216 E+VI TEA LDVS Sbjct: 201 EEVIEKTEAPLDVS 214 >ref|YP_001797808.1| 3-oxoacid CoA-transferase subunit B [Polynucleobacter necessarius subsp. necessarius STIR1] gb|ACB44194.1| 3-oxoacid CoA-transferase, B subunit [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 216 Score = 310 bits (794), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 156/194 (80%), Positives = 174/194 (89%), Gaps = 3/194 (1%) Query: 26 YVNLGIGLPTLVANHVPKDIEVWLQSENGLLGIGPFPTX---DADLINAGKQTVTTIPGS 82 YVNLGIG+PTLVANHVPKD+EVWLQSENGLLGIGPFPT DADLINAGKQT+TT+PGS Sbjct: 21 YVNLGIGMPTLVANHVPKDMEVWLQSENGLLGIGPFPTEETIDADLINAGKQTITTLPGS 80 Query: 83 SFFASADSFGMIRGGKINIAILGAMQVSQQGDLANWMIPGKMVKGMGGAMDLVAGVGRVV 142 S F+SADSFGMIRGGKINIAILGAMQVS++GDLANWMIPGKMVKGMGGAMDLVAGV VV Sbjct: 81 SIFSSADSFGMIRGGKINIAILGAMQVSERGDLANWMIPGKMVKGMGGAMDLVAGVKHVV 140 Query: 143 VLMEHVAKGKDGSISQKILKQCNLPLTGVGVVNRIITDLGVIDVTPQGLKLIELATGVSK 202 VLMEHVAK KDG+ KIL +C LPLTGVGV+++IITDL V+D+TPQGLKL ELA GV+K Sbjct: 141 VLMEHVAKKKDGTEELKILPKCTLPLTGVGVISQIITDLCVLDITPQGLKLTELAPGVTK 200 Query: 203 EDVIANTEAELDVS 216 E+VIA T A +D + Sbjct: 201 EEVIAKTGAPVDTT 214 >ref|YP_583309.1| acetyl-CoA:acetoacetyl-CoA transferase, subunit beta [Cupriavidus metallidurans CH34] gb|ABF08040.1| acetyl-CoA:acetoacetyl-CoA transferase, beta subunit [Cupriavidus metallidurans CH34] Length = 212 Score = 310 bits (793), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 156/191 (81%), Positives = 171/191 (89%), Gaps = 3/191 (1%) Query: 26 YVNLGIGLPTLVANHVPKDIEVWLQSENGLLGIGPFPTX---DADLINAGKQTVTTIPGS 82 YVNLGIGLPTLVANHVP+ +EVWLQSENGLLGIGPFPT DAD+INAGKQTVTT+PGS Sbjct: 21 YVNLGIGLPTLVANHVPEGMEVWLQSENGLLGIGPFPTEEEVDADMINAGKQTVTTLPGS 80 Query: 83 SFFASADSFGMIRGGKINIAILGAMQVSQQGDLANWMIPGKMVKGMGGAMDLVAGVGRVV 142 S F+SADSF MIRGGKIN+AILGAMQVSQ+GDLANWMIPGKMVKGMGGAMDLVAGVGRVV Sbjct: 81 SIFSSADSFAMIRGGKINLAILGAMQVSQRGDLANWMIPGKMVKGMGGAMDLVAGVGRVV 140 Query: 143 VLMEHVAKGKDGSISQKILKQCNLPLTGVGVVNRIITDLGVIDVTPQGLKLIELATGVSK 202 VLMEH AK KDG+ KIL+ CNLPLTGVGVVNRIITDL V+DVTP+GLKL+E A GVS+ Sbjct: 141 VLMEHTAKKKDGTEDIKILEACNLPLTGVGVVNRIITDLAVMDVTPEGLKLVETAPGVSR 200 Query: 203 EDVIANTEAEL 213 E+V A T +L Sbjct: 201 EEVQAKTGTKL 211