BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0223.p         (234 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_08274728.1| Succinyl-CoA:3-ketoacid-coenzyme A transferas...   427   e-118
ref|YP_003778012.1| acyl CoA:acetate/3-ketoacid CoA transferase ...   426   e-117
ref|YP_001353171.1| 3-oxoacid CoA-transferase subunit A [Janthin...   416   e-114
ref|YP_004752265.1| succinyl-CoA:3-ketoacid-coenzyme A transfera...   416   e-114
ref|YP_001630397.1| 3-oxoacid CoA-transferase subunit A [Bordete...   402   e-110

>ref|ZP_08274728.1| Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A
           [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF31802.1| Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 232

 Score =  427 bits (1097), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/231 (89%), Positives = 220/231 (95%)

Query: 1   VNKVYPDASSALSDIVKDGQTIAVGGFGLCGIPEALIAALRDSGVQNLTAISNNAGVDGF 60
           + KVYPDA+SAL+ +V DGQTIAVGGFGLCGIPEALIAALRDSGV NLTAISNNAGVDGF
Sbjct: 1   MKKVYPDAASALAGVVSDGQTIAVGGFGLCGIPEALIAALRDSGVTNLTAISNNAGVDGF 60

Query: 61  GLGQLLTTRQIKKMIASYVGENKEFERQYLAGELELEFTPQGTLAEKLRAGGAGIPAFFT 120
           GLGQLL TRQIKKMIASYVGENKEFERQYLAGELELEFTPQGTLAEKLRAGGAGIPAFFT
Sbjct: 61  GLGQLLATRQIKKMIASYVGENKEFERQYLAGELELEFTPQGTLAEKLRAGGAGIPAFFT 120

Query: 121 KTGVGTLVAEGKEIREFDGAKYVMERSLVADVSLVKAHKADKAGNLVFNKTARNFNPNVA 180
           KTGVGTLVA+GK+IREFDG +YVMERSLVADVSLVKA KAD+AGNLV+ KTARNFNPNVA
Sbjct: 121 KTGVGTLVADGKDIREFDGEQYVMERSLVADVSLVKAWKADRAGNLVYRKTARNFNPNVA 180

Query: 181 MAGKITVVEVEELVEVGELDPDQIHTAGIFVHRIVVNATPEKRIEQRTVSA 231
           MAGKIT+VEVEELVE+GE+DPDQ+HT  IFVHRIVVNATPEKRIEQRTV A
Sbjct: 181 MAGKITIVEVEELVEIGEIDPDQVHTPSIFVHRIVVNATPEKRIEQRTVRA 231


>ref|YP_003778012.1| acyl CoA:acetate/3-ketoacid CoA transferase subunit alpha
           [Herbaspirillum seropedicae SmR1]
 emb|CAM32662.1| Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit protein
           [Herbaspirillum seropedicae]
 gb|ADJ66104.1| acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit protein
           [Herbaspirillum seropedicae SmR1]
          Length = 231

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 220/231 (95%), Positives = 227/231 (98%)

Query: 1   VNKVYPDASSALSDIVKDGQTIAVGGFGLCGIPEALIAALRDSGVQNLTAISNNAGVDGF 60
           +NKVYPDA++AL DIVKDGQTIAVGGFGLCGIPEALIAALRDSGVQNLTAISNNAGVDGF
Sbjct: 1   MNKVYPDAATALKDIVKDGQTIAVGGFGLCGIPEALIAALRDSGVQNLTAISNNAGVDGF 60

Query: 61  GLGQLLTTRQIKKMIASYVGENKEFERQYLAGELELEFTPQGTLAEKLRAGGAGIPAFFT 120
           GLGQLLTTRQIKKMIASYVGENKEFERQYLAGELELEFTPQGTLAEKLRAGGAGIPAFFT
Sbjct: 61  GLGQLLTTRQIKKMIASYVGENKEFERQYLAGELELEFTPQGTLAEKLRAGGAGIPAFFT 120

Query: 121 KTGVGTLVAEGKEIREFDGAKYVMERSLVADVSLVKAHKADKAGNLVFNKTARNFNPNVA 180
           KTGVGTLVAEGKE+REFDG +YVMERSLVADVSLVKAHKADKAGNLVFNKTARNFNPNVA
Sbjct: 121 KTGVGTLVAEGKEVREFDGERYVMERSLVADVSLVKAHKADKAGNLVFNKTARNFNPNVA 180

Query: 181 MAGKITVVEVEELVEVGELDPDQIHTAGIFVHRIVVNATPEKRIEQRTVSA 231
           MAGK+TVVEVEELVEVG+LDPDQIHT GIFVHRIVVNATPEKRIEQRTV A
Sbjct: 181 MAGKVTVVEVEELVEVGQLDPDQIHTPGIFVHRIVVNATPEKRIEQRTVRA 231


>ref|YP_001353171.1| 3-oxoacid CoA-transferase subunit A [Janthinobacterium sp.
           Marseille]
 gb|ABR88418.1| 3-oxoacid CoA-transferase subunit A [Janthinobacterium sp.
           Marseille]
          Length = 232

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 199/231 (86%), Positives = 221/231 (95%)

Query: 1   VNKVYPDASSALSDIVKDGQTIAVGGFGLCGIPEALIAALRDSGVQNLTAISNNAGVDGF 60
           +NKVYPDA+SAL+DIV+DGQTIAVGGFGLCGIPEALIAALRDSGVQNLTAISNNAGVD  
Sbjct: 1   MNKVYPDAASALADIVRDGQTIAVGGFGLCGIPEALIAALRDSGVQNLTAISNNAGVDDA 60

Query: 61  GLGQLLTTRQIKKMIASYVGENKEFERQYLAGELELEFTPQGTLAEKLRAGGAGIPAFFT 120
           GLGQLL TRQIKKMIASYVGENKEFERQ+LAGELELEFTPQGTLAEKLRAGGAGIPAFFT
Sbjct: 61  GLGQLLQTRQIKKMIASYVGENKEFERQFLAGELELEFTPQGTLAEKLRAGGAGIPAFFT 120

Query: 121 KTGVGTLVAEGKEIREFDGAKYVMERSLVADVSLVKAHKADKAGNLVFNKTARNFNPNVA 180
           KTGVGT+VAEGK++REFDG +YVMER+LVADVS+VKA+ ADKAGNLV+ +TARNFNPNVA
Sbjct: 121 KTGVGTVVAEGKDVREFDGEQYVMERALVADVSIVKAYMADKAGNLVYRRTARNFNPNVA 180

Query: 181 MAGKITVVEVEELVEVGELDPDQIHTAGIFVHRIVVNATPEKRIEQRTVSA 231
           MAGKITVVEVE+LVE+GE+DPD +HT GIF+HRIV+NA P+KRIEQRT+ A
Sbjct: 181 MAGKITVVEVEKLVEIGEIDPDHVHTPGIFIHRIVLNAHPQKRIEQRTLRA 231


>ref|YP_004752265.1| succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A
           [Collimonas fungivorans Ter331]
 gb|AEK61442.1| Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A
           [Collimonas fungivorans Ter331]
          Length = 232

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 214/232 (92%), Positives = 224/232 (96%)

Query: 1   VNKVYPDASSALSDIVKDGQTIAVGGFGLCGIPEALIAALRDSGVQNLTAISNNAGVDGF 60
           +NKVYPDA+SAL+ IVKDGQTIAVGGFGLCGIPEALI ALRDS VQNLTAISNNAGVDGF
Sbjct: 1   MNKVYPDAASALAGIVKDGQTIAVGGFGLCGIPEALILALRDSAVQNLTAISNNAGVDGF 60

Query: 61  GLGQLLTTRQIKKMIASYVGENKEFERQYLAGELELEFTPQGTLAEKLRAGGAGIPAFFT 120
           GLGQLL TRQIKKMIASYVGENKEFERQYLAGELELEFTPQGTLAEKLRAGG+GIPAFFT
Sbjct: 61  GLGQLLATRQIKKMIASYVGENKEFERQYLAGELELEFTPQGTLAEKLRAGGSGIPAFFT 120

Query: 121 KTGVGTLVAEGKEIREFDGAKYVMERSLVADVSLVKAHKADKAGNLVFNKTARNFNPNVA 180
           KTGVGTLVAEGKEIREFDGAKYVMERSLVAD+SLVKA+KAD++GNL+FNKTARNFNPNVA
Sbjct: 121 KTGVGTLVAEGKEIREFDGAKYVMERSLVADISLVKAYKADRSGNLIFNKTARNFNPNVA 180

Query: 181 MAGKITVVEVEELVEVGELDPDQIHTAGIFVHRIVVNATPEKRIEQRTVSAA 232
           MAGKITVVEVE LVEVGELDPDQ+HT GIFVHRIVVNATPEKRIEQRTV  A
Sbjct: 181 MAGKITVVEVEHLVEVGELDPDQVHTPGIFVHRIVVNATPEKRIEQRTVRTA 232


>ref|YP_001630397.1| 3-oxoacid CoA-transferase subunit A [Bordetella petrii DSM 12804]
 emb|CAP42128.1| 3-oxoacid CoA-transferase subunit A [Bordetella petrii]
          Length = 232

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 195/232 (84%), Positives = 213/232 (91%)

Query: 1   VNKVYPDASSALSDIVKDGQTIAVGGFGLCGIPEALIAALRDSGVQNLTAISNNAGVDGF 60
           ++KVY  A+ AL+ IV+DGQ IAVGGFGLCGIPEALIAALRDSGV+NLT ISNNAGVDGF
Sbjct: 1   MDKVYASAAEALAGIVEDGQMIAVGGFGLCGIPEALIAALRDSGVKNLTCISNNAGVDGF 60

Query: 61  GLGQLLTTRQIKKMIASYVGENKEFERQYLAGELELEFTPQGTLAEKLRAGGAGIPAFFT 120
           GLGQLL TRQI+KMIASYVGENKEFERQYLAGELELEFTPQGTLAEKLRAGGAGIPAFFT
Sbjct: 61  GLGQLLNTRQIRKMIASYVGENKEFERQYLAGELELEFTPQGTLAEKLRAGGAGIPAFFT 120

Query: 121 KTGVGTLVAEGKEIREFDGAKYVMERSLVADVSLVKAHKADKAGNLVFNKTARNFNPNVA 180
           +TGVGT+VA+GKE+REFDG +YVMERSLV DVSLVKAH AD++GNLVF KTARNFNPNVA
Sbjct: 121 RTGVGTIVADGKELREFDGQQYVMERSLVPDVSLVKAHIADRSGNLVFRKTARNFNPNVA 180

Query: 181 MAGKITVVEVEELVEVGELDPDQIHTAGIFVHRIVVNATPEKRIEQRTVSAA 232
           MAGKITVVEVEE+V+ G LDPDQIH  GI+VHRIV+NA PEKRIEQRT   A
Sbjct: 181 MAGKITVVEVEEIVDTGALDPDQIHLPGIYVHRIVLNAQPEKRIEQRTTRPA 232