BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0218.p (298 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_07774093.1| metallo-beta-lactamase superfamily protein [P... 386 e-105 ref|YP_350202.1| beta-lactamase-like protein [Pseudomonas fluore... 375 e-102 ref|YP_004703677.1| beta-lactamase domain-containing protein [Ps... 374 e-101 ref|YP_001670645.1| beta-lactamase domain-containing protein [Ps... 367 1e-99 ref|YP_001747906.1| beta-lactamase domain-containing protein [Ps... 367 1e-99 >ref|ZP_07774093.1| metallo-beta-lactamase superfamily protein [Pseudomonas fluorescens WH6] gb|EFQ64857.1| metallo-beta-lactamase superfamily protein [Pseudomonas fluorescens WH6] Length = 288 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 190/265 (71%), Positives = 216/265 (81%), Gaps = 2/265 (0%) Query: 34 LKLDAYNPGDKALFPVSSVLVTGKQDAILVDAQFGRTQAEQVVEKIRASGKKLVAVYISH 93 L LD YNPG+ A+FPVSSVLV+G +DAILVDAQFG+ QAEQ+V+KIRASGK L +YISH Sbjct: 26 LTLDVYNPGEAAIFPVSSVLVSGAKDAILVDAQFGKGQAEQLVQKIRASGKNLTTIYISH 85 Query: 94 GDPDYYFGLDTIKAAYPDVKILATPQTVAHIKETVAQKLAFWGPKLGADAPTQTIVPDVL 153 GDPDYYFGLDT+ AA+P K+LA V HI TVA KLAFWGPK+GAD P +TIVP VL Sbjct: 86 GDPDYYFGLDTLTAAFPQAKVLAPQPVVDHINATVAGKLAFWGPKMGADKPAKTIVPQVL 145 Query: 154 DGNTLTLEGKKLQVIGLDGPQPERSFVWIPSIGAVVGGVVVNGSEHIWMADTQGAQSHKD 213 G++LTLEG++L VIGLDGPQP+RSFVWIPSI AV+GGVVV + H+WMADTQ AQSHKD Sbjct: 146 QGHSLTLEGQQLDVIGLDGPQPDRSFVWIPSIKAVIGGVVVAQNIHVWMADTQSAQSHKD 205 Query: 214 WLGTLARIEKLKPRIVIPGHYAAGAPMTIASVKYTRDYIKAFDAETAKAVDSTALIAAMK 273 WL TL RIE LKPR VIPGHY A ++ASV +T DYIKAFD ETAKA DS ALIAAMK Sbjct: 206 WLATLQRIEDLKPRTVIPGHYLGTA--SLASVTFTADYIKAFDIETAKAKDSAALIAAMK 263 Query: 274 ARYPAPTNLSVLELSAKVAKGEIKW 298 RYP + S LELSAKVAKGE+KW Sbjct: 264 KRYPTLADESSLELSAKVAKGEMKW 288 >ref|YP_350202.1| beta-lactamase-like protein [Pseudomonas fluorescens Pf0-1] gb|ABA76211.1| putative hydrolase [Pseudomonas fluorescens Pf0-1] Length = 292 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 199/294 (67%), Positives = 233/294 (79%), Gaps = 5/294 (1%) Query: 5 FHTISRPLLALAAAVGILAAGAAAASDNVLKLDAYNPGDKALFPVSSVLVTGKQDAILVD 64 F T+ R LLA A L A AA+ N L LD YNPG A+FPV+SVLV+G++DAILVD Sbjct: 4 FTTLKRVLLATAT----LGFAAHAAAAN-LTLDVYNPGTNAIFPVTSVLVSGEKDAILVD 58 Query: 65 AQFGRTQAEQVVEKIRASGKKLVAVYISHGDPDYYFGLDTIKAAYPDVKILATPQTVAHI 124 AQFG++QAEQVVEKIRASGK+L +YISHGDPDYYFGLDT+ A+PD K+LA+ TV HI Sbjct: 59 AQFGKSQAEQVVEKIRASGKQLTTIYISHGDPDYYFGLDTLTKAFPDAKVLASQPTVDHI 118 Query: 125 KETVAQKLAFWGPKLGADAPTQTIVPDVLDGNTLTLEGKKLQVIGLDGPQPERSFVWIPS 184 K+TV KLAFWGPK+GAD P +TIVP VL G++L LEG+KLQV+GLDG QP+RSFVWIPS Sbjct: 119 KQTVDGKLAFWGPKMGADVPAKTIVPGVLKGDSLMLEGQKLQVVGLDGKQPDRSFVWIPS 178 Query: 185 IGAVVGGVVVNGSEHIWMADTQGAQSHKDWLGTLARIEKLKPRIVIPGHYAAGAPMTIAS 244 + AVVGGVVV + H+WMADTQ AQSH DWL TL IE LKP+ V+PGHY + ++A+ Sbjct: 179 LKAVVGGVVVAENIHVWMADTQTAQSHADWLQTLHSIETLKPKTVVPGHYLGDSARSLAA 238 Query: 245 VKYTRDYIKAFDAETAKAVDSTALIAAMKARYPAPTNLSVLELSAKVAKGEIKW 298 VK+T DYIKAFDAETAKA DS ALIAAMK RYP S LELSAKVAKGE+KW Sbjct: 239 VKFTADYIKAFDAETAKAKDSAALIAAMKKRYPTLGEESSLELSAKVAKGEMKW 292 >ref|YP_004703677.1| beta-lactamase domain-containing protein [Pseudomonas putida S16] gb|AEJ14797.1| beta-lactamase domain-containing protein [Pseudomonas putida S16] Length = 285 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 175/275 (63%), Positives = 225/275 (81%), Gaps = 1/275 (0%) Query: 24 AGAAAASDNVLKLDAYNPGDKALFPVSSVLVTGKQDAILVDAQFGRTQAEQVVEKIRASG 83 AG A A+D L+L+ YNPG +A+FPVSSV+V+G+ DAILVDAQFG+ QAEQ+V+++RA G Sbjct: 12 AGPALAADP-LRLEVYNPGHEAIFPVSSVIVSGEHDAILVDAQFGKAQAEQLVQRLRAGG 70 Query: 84 KKLVAVYISHGDPDYYFGLDTIKAAYPDVKILATPQTVAHIKETVAQKLAFWGPKLGADA 143 K+L +YISHGDPDYYFGLDT+ A+PD K+LA+ TVAHI++T KLA+WGP++GAD Sbjct: 71 KQLTTIYISHGDPDYYFGLDTLTQAFPDAKVLASAATVAHIRQTKDAKLAYWGPQMGADK 130 Query: 144 PTQTIVPDVLDGNTLTLEGKKLQVIGLDGPQPERSFVWIPSIGAVVGGVVVNGSEHIWMA 203 P + ++P VL+GN LT+EG+ L+V+GLDGPQP+RSFVWIPSI AVVGGVVV+ + H+WMA Sbjct: 131 PARLVLPQVLEGNRLTVEGQDLEVVGLDGPQPDRSFVWIPSIKAVVGGVVVSENIHVWMA 190 Query: 204 DTQGAQSHKDWLGTLARIEKLKPRIVIPGHYAAGAPMTIASVKYTRDYIKAFDAETAKAV 263 DTQ A+SH DWLGTLA IE L PR VIPGHY + ++ +V++T +YI+ FDAETA+A Sbjct: 191 DTQTAKSHADWLGTLAHIEALAPRTVIPGHYLGDSSRSLQAVRFTANYIRDFDAETAQAK 250 Query: 264 DSTALIAAMKARYPAPTNLSVLELSAKVAKGEIKW 298 D+ ALIAAMK RYP+ + S LEL AKVAKGE+KW Sbjct: 251 DAGALIAAMKRRYPSLADESSLELGAKVAKGEMKW 285 >ref|YP_001670645.1| beta-lactamase domain-containing protein [Pseudomonas putida GB-1] gb|ABZ00310.1| beta-lactamase domain protein [Pseudomonas putida GB-1] Length = 291 Score = 367 bits (942), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 174/292 (59%), Positives = 224/292 (76%), Gaps = 2/292 (0%) Query: 7 TISRPLLALAAAVGILAAGAAAASDNVLKLDAYNPGDKALFPVSSVLVTGKQDAILVDAQ 66 ++ PL L A LA AA L+L+ YNPG +A+FP+SSV+V+G+ DA+LVDAQ Sbjct: 2 SLFSPLRGLLLACVTLAGPVLAAEP--LQLEVYNPGHEAIFPISSVIVSGQHDAVLVDAQ 59 Query: 67 FGRTQAEQVVEKIRASGKKLVAVYISHGDPDYYFGLDTIKAAYPDVKILATPQTVAHIKE 126 FG+ QAEQ+V+++RA GK L ++YISHGDPDYYFGLDT+ A+PD K+LA+ TVAHI++ Sbjct: 60 FGKAQAEQLVQRLRAGGKHLTSIYISHGDPDYYFGLDTLTQAFPDAKVLASAATVAHIRQ 119 Query: 127 TVAQKLAFWGPKLGADAPTQTIVPDVLDGNTLTLEGKKLQVIGLDGPQPERSFVWIPSIG 186 T+ KLA+WGP++GAD P + ++P VL+GN L LEG+ L V+GLDGPQP+RSFVWIPSI Sbjct: 120 TMDAKLAYWGPQMGADKPARLVLPQVLEGNRLMLEGQALDVVGLDGPQPDRSFVWIPSIK 179 Query: 187 AVVGGVVVNGSEHIWMADTQGAQSHKDWLGTLARIEKLKPRIVIPGHYAAGAPMTIASVK 246 AVVGGVVV+ H+WMADTQ A+SH DWL TLARIE L PR V+PGHY + ++ +V+ Sbjct: 180 AVVGGVVVSEHIHVWMADTQTAKSHADWLATLARIEALAPRTVVPGHYLGDSSRSLQAVR 239 Query: 247 YTRDYIKAFDAETAKAVDSTALIAAMKARYPAPTNLSVLELSAKVAKGEIKW 298 +T +YI+ FDAET KA D+ ALI AMK RYP + S LEL AKVAKGE+KW Sbjct: 240 FTANYIRDFDAETVKAKDAGALIEAMKHRYPGLADESSLELGAKVAKGEMKW 291 >ref|YP_001747906.1| beta-lactamase domain-containing protein [Pseudomonas putida W619] gb|ACA71537.1| beta-lactamase domain protein [Pseudomonas putida W619] Length = 291 Score = 367 bits (942), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 176/292 (60%), Positives = 224/292 (76%), Gaps = 2/292 (0%) Query: 7 TISRPLLALAAAVGILAAGAAAASDNVLKLDAYNPGDKALFPVSSVLVTGKQDAILVDAQ 66 +I PL +L A LA A AA L+LD YNPG +A+FPVSSV+V+G++DAILVDAQ Sbjct: 2 SIFTPLRSLVLACVALAGQAQAAEP--LQLDIYNPGHEAIFPVSSVIVSGEKDAILVDAQ 59 Query: 67 FGRTQAEQVVEKIRASGKKLVAVYISHGDPDYYFGLDTIKAAYPDVKILATPQTVAHIKE 126 FG+ QAEQ+V+++RA GK L +YISHGDPDYYFGLDT+ A+P+ ++A+ TVAHI++ Sbjct: 60 FGKAQAEQLVQRLRAGGKHLTTIYISHGDPDYYFGLDTLTQAFPEASVVASAATVAHIRQ 119 Query: 127 TVAQKLAFWGPKLGADAPTQTIVPDVLDGNTLTLEGKKLQVIGLDGPQPERSFVWIPSIG 186 T+ KLA+WGP++G+D P + +VP VLDGN L LEG+ L+V+GLDGPQ ERSFVWIPSI Sbjct: 120 TMDAKLAYWGPQMGSDKPARLVVPQVLDGNRLMLEGQPLEVMGLDGPQRERSFVWIPSIK 179 Query: 187 AVVGGVVVNGSEHIWMADTQGAQSHKDWLGTLARIEKLKPRIVIPGHYAAGAPMTIASVK 246 AVVGGVVV+ + H+WMADTQ A+SH DWLGTL IE+L PR V+PGHY + ++ +V Sbjct: 180 AVVGGVVVSENIHVWMADTQSAKSHADWLGTLKHIEQLSPRTVVPGHYLGQSDHSLDAVH 239 Query: 247 YTRDYIKAFDAETAKAVDSTALIAAMKARYPAPTNLSVLELSAKVAKGEIKW 298 +T YI+AFD E AKA D+ LIAAMK RYP + S LEL AKVAKGE+KW Sbjct: 240 FTASYIQAFDVEAAKAKDADGLIAAMKKRYPGLADESSLELGAKVAKGEMKW 291