BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0206.p (418 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778028.1| amidohydrolase [Herbaspirillum seropedicae S... 774 0.0 ref|YP_001888007.1| hydantoinase/carbamoylase family amidase [Bu... 643 0.0 emb|CAZ90207.1| N-carbamyl-L-cysteine amidohydrolase [Thiomonas ... 634 e-180 ref|YP_002985688.1| amidase, hydantoinase/carbamoylase family [D... 623 e-176 ref|YP_004233433.1| amidase, hydantoinase/carbamoylase family [A... 623 e-176 >ref|YP_003778028.1| amidohydrolase [Herbaspirillum seropedicae SmR1] gb|ADJ66120.1| amidohydrolase protein [Herbaspirillum seropedicae SmR1] Length = 419 Score = 774 bits (1998), Expect = 0.0, Method: Compositional matrix adjust. Identities = 370/418 (88%), Positives = 389/418 (93%) Query: 1 MDMKTSITNLRIDGKRLWNSLMDLGAIGATPKGGVCRLALTDLDKQGRDLVSSWAKQEGM 60 MDM T I+ LRIDG RLW+SLM+L IGAT KGGVCRLALTDLDKQGRDLVSSWA+ EGM Sbjct: 1 MDMNTQISTLRIDGARLWDSLMELARIGATAKGGVCRLALTDLDKQGRDLVSSWARAEGM 60 Query: 61 SVVVDQIGNIFMRRAGRNNDLPPVVTGSHIDTQPTGGKFDGNYGVLAGMEVIRTLNQHNI 120 SVVVDQIGNIFMRR GRNN LPPV+TGSHIDTQPTGGKFDGNYGVLAG+EV+RTLNQHNI Sbjct: 61 SVVVDQIGNIFMRRPGRNNALPPVMTGSHIDTQPTGGKFDGNYGVLAGIEVVRTLNQHNI 120 Query: 121 QTEAPIEVAVWTNEEGSRFVPVMMGSGVFCGAFTLEHAYGATDVDGKNVKDELTRIGYIG 180 QTEAPIEVAVWTNEEGSRFVPVMMGSGVFCGAFTL+HAY ATDV+GK V+DEL RIGYIG Sbjct: 121 QTEAPIEVAVWTNEEGSRFVPVMMGSGVFCGAFTLDHAYNATDVEGKKVRDELERIGYIG 180 Query: 181 EQKCGDHPIGAYYEAHIEQGPVLENADTVIGVVPAVLGLSWYDCTVTGFESHAGPTPMEI 240 EQ CGDHPIGAYYEAHIEQGPVLENADTVIGVVPAVLGLSWYDCTVTGFESHAGPTPMEI Sbjct: 181 EQVCGDHPIGAYYEAHIEQGPVLENADTVIGVVPAVLGLSWYDCTVTGFESHAGPTPMEI 240 Query: 241 RKDALQVSTYIMQEVVAIANRYPPYGRGTVGQVQVMPNSRNVIPGQVKFSIDLRNVSDET 300 RKDALQVSTYIMQEVVAIA+RY PYGRGTVGQVQVMPNSRNVIPGQVKFSIDLRNVS+ + Sbjct: 241 RKDALQVSTYIMQEVVAIAHRYAPYGRGTVGQVQVMPNSRNVIPGQVKFSIDLRNVSEAS 300 Query: 301 LNQMHEDLLACLEQTRQKTGLKIELERVSYFPPCPFHPDCVGEVRNASAMLGYATMDVVS 360 L +MHEDLLA LE R+KTGL IELERVSYFPPCPFHPDCV +VR ASA LGY TMDVVS Sbjct: 301 LTRMHEDLLAYLEAMRKKTGLSIELERVSYFPPCPFHPDCVDKVRAASAALGYKTMDVVS 360 Query: 361 GAGHDAIYAARLVPAGMIFVPCKDGVSHNEIEDAKPEHLEAGANVLLHAMLATAKVVA 418 GAGHDAIYAARL PAGMIFVPCKDGVSHNEIEDA+PEHLEAG NVLL AMLA+A VV+ Sbjct: 361 GAGHDAIYAARLAPAGMIFVPCKDGVSHNEIEDARPEHLEAGCNVLLQAMLASAGVVS 418 >ref|YP_001888007.1| hydantoinase/carbamoylase family amidase [Burkholderia phytofirmans PsJN] gb|ACD18637.1| amidase, hydantoinase/carbamoylase family [Burkholderia phytofirmans PsJN] Length = 412 Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust. Identities = 299/412 (72%), Positives = 351/412 (85%) Query: 7 ITNLRIDGKRLWNSLMDLGAIGATPKGGVCRLALTDLDKQGRDLVSSWAKQEGMSVVVDQ 66 + +LRIDG+RLW SLMDL AIGATPKGGV RLALT+LDKQGRDLV SW + G+++ VD+ Sbjct: 1 MKDLRIDGERLWRSLMDLAAIGATPKGGVKRLALTELDKQGRDLVVSWGRAAGLAITVDR 60 Query: 67 IGNIFMRRAGRNNDLPPVVTGSHIDTQPTGGKFDGNYGVLAGMEVIRTLNQHNIQTEAPI 126 IGNIFMRRAG + D PPV +GSHIDTQPTGGKFDGNYGVLA +EV+RTL+ ++T AP+ Sbjct: 61 IGNIFMRRAGTDPDAPPVASGSHIDTQPTGGKFDGNYGVLAALEVMRTLDDAGVKTCAPL 120 Query: 127 EVAVWTNEEGSRFVPVMMGSGVFCGAFTLEHAYGATDVDGKNVKDELTRIGYIGEQKCGD 186 EVA+WTNEEGSRFVPVMMGSGVFCGAFTLEHAY A D++GK V+DEL IGY+G+++ G Sbjct: 121 EVAIWTNEEGSRFVPVMMGSGVFCGAFTLEHAYAARDIEGKRVRDELEAIGYLGDEEPGK 180 Query: 187 HPIGAYYEAHIEQGPVLENADTVIGVVPAVLGLSWYDCTVTGFESHAGPTPMEIRKDALQ 246 HP+GAY+EAHIEQGPVLE+ VIGVVP VLGLSWYDC V G E+HAGPTPM IRKDALQ Sbjct: 181 HPLGAYFEAHIEQGPVLEDEGKVIGVVPGVLGLSWYDCEVRGMEAHAGPTPMAIRKDALQ 240 Query: 247 VSTYIMQEVVAIANRYPPYGRGTVGQVQVMPNSRNVIPGQVKFSIDLRNVSDETLNQMHE 306 V+T +MQEVVAIANRYPPYGRGTVG VQ PNSRNVIPG VKFSIDLRNV+D LNQMH+ Sbjct: 241 VATRVMQEVVAIANRYPPYGRGTVGFVQTFPNSRNVIPGSVKFSIDLRNVNDALLNQMHD 300 Query: 307 DLLACLEQTRQKTGLKIELERVSYFPPCPFHPDCVGEVRNASAMLGYATMDVVSGAGHDA 366 ++LA +++T+ ++GL I +ERVSY+ PC FHP CV VR A+ LGY TMDVVSGAGHDA Sbjct: 301 EMLAFIDRTQSESGLSIGIERVSYYRPCEFHPQCVDAVRRATGALGYPTMDVVSGAGHDA 360 Query: 367 IYAARLVPAGMIFVPCKDGVSHNEIEDAKPEHLEAGANVLLHAMLATAKVVA 418 +Y AR+ P+GMIFVPCKDG+SHNEIEDA+ +HLEAG NVLLH+ML A V+ Sbjct: 361 VYTARVAPSGMIFVPCKDGISHNEIEDARSDHLEAGCNVLLHSMLERAGQVS 412 >emb|CAZ90207.1| N-carbamyl-L-cysteine amidohydrolase [Thiomonas sp. 3As] Length = 424 Score = 634 bits (1635), Expect = e-180, Method: Compositional matrix adjust. Identities = 297/414 (71%), Positives = 347/414 (83%) Query: 4 KTSITNLRIDGKRLWNSLMDLGAIGATPKGGVCRLALTDLDKQGRDLVSSWAKQEGMSVV 63 +T+ LR++G+RLW SLM+L IGATPKGGVCRL LTDLDKQGRDLV +WA++ GMSV Sbjct: 10 QTAAAVLRVNGERLWQSLMELAQIGATPKGGVCRLTLTDLDKQGRDLVLAWAREAGMSVT 69 Query: 64 VDQIGNIFMRRAGRNNDLPPVVTGSHIDTQPTGGKFDGNYGVLAGMEVIRTLNQHNIQTE 123 +D+IGN FMRRAGRNN LPP++TGSHIDTQPTGGKFDGNYGVLAG+EV+RTLN H IQTE Sbjct: 70 IDKIGNGFMRRAGRNNALPPIMTGSHIDTQPTGGKFDGNYGVLAGLEVVRTLNDHGIQTE 129 Query: 124 APIEVAVWTNEEGSRFVPVMMGSGVFCGAFTLEHAYGATDVDGKNVKDELTRIGYIGEQK 183 APIEVA WTNEEGSRFVPVMMGSGVF AFTLEHAY ATD +GK V+ EL RIGYIGEQ+ Sbjct: 130 APIEVAFWTNEEGSRFVPVMMGSGVFAKAFTLEHAYAATDTEGKTVRGELERIGYIGEQE 189 Query: 184 CGDHPIGAYYEAHIEQGPVLENADTVIGVVPAVLGLSWYDCTVTGFESHAGPTPMEIRKD 243 GDHP+GAY+E HIEQGPVLE+A+ IGVV VLG+ W+DCTVTG E+HAGPTPM +RKD Sbjct: 190 PGDHPLGAYFETHIEQGPVLEDAEVTIGVVQGVLGIRWFDCTVTGMEAHAGPTPMALRKD 249 Query: 244 ALQVSTYIMQEVVAIANRYPPYGRGTVGQVQVMPNSRNVIPGQVKFSIDLRNVSDETLNQ 303 ALQV+T++MQEVVA A R+ P+GRGTVG VQV PNSRNVIPG+VKFSIDLRN SD +NQ Sbjct: 250 ALQVATHLMQEVVACALRHAPHGRGTVGMVQVHPNSRNVIPGRVKFSIDLRNGSDAAVNQ 309 Query: 304 MHEDLLACLEQTRQKTGLKIELERVSYFPPCPFHPDCVGEVRNASAMLGYATMDVVSGAG 363 M +++ A + +GL I+++ VS +P FH DC+ V+ A+A LGY+ M VSGAG Sbjct: 310 MADEVKAYARKLADDSGLSIQIDLVSSYPAQAFHADCINAVQRAAAQLGYSHMPAVSGAG 369 Query: 364 HDAIYAARLVPAGMIFVPCKDGVSHNEIEDAKPEHLEAGANVLLHAMLATAKVV 417 HDA+YAARL PAGMIF+PCKDG+SHNEIEDAKPEH+ AGANVLLHAML A VV Sbjct: 370 HDAVYAARLAPAGMIFIPCKDGISHNEIEDAKPEHITAGANVLLHAMLERAGVV 423 >ref|YP_002985688.1| amidase, hydantoinase/carbamoylase family [Dickeya dadantii Ech703] gb|ACS83866.1| amidase, hydantoinase/carbamoylase family [Dickeya dadantii Ech703] Length = 428 Score = 623 bits (1607), Expect = e-176, Method: Compositional matrix adjust. Identities = 292/410 (71%), Positives = 334/410 (81%) Query: 8 TNLRIDGKRLWNSLMDLGAIGATPKGGVCRLALTDLDKQGRDLVSSWAKQEGMSVVVDQI 67 T+LR+DG RLW SLMDL IGATPKGGVCRL LTDLD+QGRDLV W G+SV VDQI Sbjct: 16 TDLRVDGDRLWQSLMDLAVIGATPKGGVCRLTLTDLDRQGRDLVVGWGNAAGLSVDVDQI 75 Query: 68 GNIFMRRAGRNNDLPPVVTGSHIDTQPTGGKFDGNYGVLAGMEVIRTLNQHNIQTEAPIE 127 GN+FMRRAGRNN LPP+V GSHIDTQPTGGKFDGN+GVLA +EVIRTLN I+TEAP+E Sbjct: 76 GNVFMRRAGRNNALPPIVAGSHIDTQPTGGKFDGNFGVLAALEVIRTLNDSGIETEAPVE 135 Query: 128 VAVWTNEEGSRFVPVMMGSGVFCGAFTLEHAYGATDVDGKNVKDELTRIGYIGEQKCGDH 187 + WTNEEGSRFVPVMMGSGVF G F+LEHAY A D+DGK VKDELT+IGY G Q GD Sbjct: 136 MVFWTNEEGSRFVPVMMGSGVFAGVFSLEHAYAAVDIDGKTVKDELTKIGYAGPQTPGDR 195 Query: 188 PIGAYYEAHIEQGPVLENADTVIGVVPAVLGLSWYDCTVTGFESHAGPTPMEIRKDALQV 247 PIGAY+EAHIEQGP+LE+ D IGVV AVLG+ WYDC VTG ESHAGPTPM +RKDALQV Sbjct: 196 PIGAYFEAHIEQGPILEDEDVTIGVVQAVLGIRWYDCVVTGQESHAGPTPMALRKDALQV 255 Query: 248 STYIMQEVVAIANRYPPYGRGTVGQVQVMPNSRNVIPGQVKFSIDLRNVSDETLNQMHED 307 ST IMQEVVAIA R+ P+GRGTVG VQV PNSRNV+PG VKFS+D RN++D +++M Sbjct: 256 STRIMQEVVAIAGRFAPHGRGTVGMVQVHPNSRNVVPGSVKFSVDFRNINDALVDEMDAA 315 Query: 308 LLACLEQTRQKTGLKIELERVSYFPPCPFHPDCVGEVRNASAMLGYATMDVVSGAGHDAI 367 L A + Q Q+TGL IEL +VS++P PFHP+C VRNA+ LGY+ D+VSGAGHDA+ Sbjct: 316 LKAFISQLAQETGLGIELTQVSHYPAAPFHPECKDAVRNAAQRLGYSHRDIVSGAGHDAV 375 Query: 368 YAARLVPAGMIFVPCKDGVSHNEIEDAKPEHLEAGANVLLHAMLATAKVV 417 Y + L P GMIF+PCKDG+SHNEIE A PEH+ AGANVLLHAML A VV Sbjct: 376 YMSMLAPTGMIFIPCKDGISHNEIEYAAPEHVTAGANVLLHAMLEKAGVV 425 >ref|YP_004233433.1| amidase, hydantoinase/carbamoylase family [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX44866.1| amidase, hydantoinase/carbamoylase family [Acidovorax avenae subsp. avenae ATCC 19860] Length = 419 Score = 623 bits (1607), Expect = e-176, Method: Compositional matrix adjust. Identities = 290/411 (70%), Positives = 342/411 (83%) Query: 4 KTSITNLRIDGKRLWNSLMDLGAIGATPKGGVCRLALTDLDKQGRDLVSSWAKQEGMSVV 63 KT I LR++G+RLW+SLM+L IGATPKGGVCRL LTDLDKQGRDLV+ WA++ GMSV Sbjct: 7 KTDIRQLRVNGERLWDSLMELARIGATPKGGVCRLTLTDLDKQGRDLVTRWAREAGMSVT 66 Query: 64 VDQIGNIFMRRAGRNNDLPPVVTGSHIDTQPTGGKFDGNYGVLAGMEVIRTLNQHNIQTE 123 VD+IGN+FMRR GR++ LPP++TGSHIDTQPTGGKFDGNYGVLAG+EV+RTLN H I+TE Sbjct: 67 VDKIGNVFMRRPGRDDSLPPIMTGSHIDTQPTGGKFDGNYGVLAGIEVVRTLNDHGIETE 126 Query: 124 APIEVAVWTNEEGSRFVPVMMGSGVFCGAFTLEHAYGATDVDGKNVKDELTRIGYIGEQK 183 APIEVA WTNEEGSRFVPVMMGSGVF AFTLEHAY ATD +GK V+ EL RIGYIG+Q+ Sbjct: 127 APIEVAFWTNEEGSRFVPVMMGSGVFARAFTLEHAYAATDTEGKTVRGELERIGYIGDQE 186 Query: 184 CGDHPIGAYYEAHIEQGPVLENADTVIGVVPAVLGLSWYDCTVTGFESHAGPTPMEIRKD 243 GDHPIGAY+E HIEQGPVLE+ + IGVV VLG+ WYDCTVTG E+HAGPTPM +R+D Sbjct: 187 PGDHPIGAYFETHIEQGPVLEDNNKTIGVVTGVLGIRWYDCTVTGMEAHAGPTPMALRRD 246 Query: 244 ALQVSTYIMQEVVAIANRYPPYGRGTVGQVQVMPNSRNVIPGQVKFSIDLRNVSDETLNQ 303 ALQV+T +MQEVVA A+R+PP+GRGTVG V V PNSRNVIPGQVKFSIDLRN +D + Sbjct: 247 ALQVATRLMQEVVACAHRHPPHGRGTVGMVHVHPNSRNVIPGQVKFSIDLRNATDAECDS 306 Query: 304 MHEDLLACLEQTRQKTGLKIELERVSYFPPCPFHPDCVGEVRNASAMLGYATMDVVSGAG 363 M +D+ A + Q+TGL I+++ VS +P PFH +CV V A+ LGY+ M VSGAG Sbjct: 307 MDQDIRAVAARLSQETGLPIQIDLVSNYPAQPFHAECVEAVGRAAEQLGYSHMPAVSGAG 366 Query: 364 HDAIYAARLVPAGMIFVPCKDGVSHNEIEDAKPEHLEAGANVLLHAMLATA 414 HDA+Y ARL PAGM+F+PCKDG+SHNEIEDA+PEH+ AG NVLLHAML A Sbjct: 367 HDAVYMARLAPAGMVFIPCKDGISHNEIEDAQPEHITAGCNVLLHAMLERA 417