BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0196.p         (110 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_02883411.1| small multidrug resistance protein [Burkholde...   155   1e-36
ref|YP_001895367.1| small multidrug resistance protein [Burkhold...   154   3e-36
ref|YP_004228384.1| small multidrug resistance protein [Burkhold...   154   4e-36
ref|YP_544992.1| small multidrug resistance protein [Methylobaci...   154   5e-36
ref|ZP_06898817.1| DMT superfamily multidrug transporter EmrE [R...   152   1e-35

>ref|ZP_02883411.1| small multidrug resistance protein [Burkholderia graminis C4D1M]
 gb|EDT10843.1| small multidrug resistance protein [Burkholderia graminis C4D1M]
          Length = 112

 Score =  155 bits (393), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 78/110 (70%), Positives = 94/110 (85%)

Query: 1   MHPYLLLGIAIVAEVIATSALRAAEGFTRLLPSIMVVIGYAVAFLCLSLTLKSIPVGIVY 60
           + PY LLGIAIVAEVIATSA+RA+EGF+R +PS +VV+GYAVAF CLSLTL+SIPVGIVY
Sbjct: 3   LPPYALLGIAIVAEVIATSAMRASEGFSRFVPSAIVVLGYAVAFYCLSLTLRSIPVGIVY 62

Query: 61  AIWSGLGIVLISVVAYFLYGQSLDLPAIIGMALILVGVVVLNLFSKSTVH 110
           A+WSG GIVLI++VA  LYGQ  D+PA+IG+ LI+ GV VLN+FSK   H
Sbjct: 63  AVWSGAGIVLITLVALLLYGQVPDVPAVIGLGLIIAGVAVLNMFSKMQAH 112


>ref|YP_001895367.1| small multidrug resistance protein [Burkholderia phytofirmans PsJN]
 gb|ACD16143.1| small multidrug resistance protein [Burkholderia phytofirmans PsJN]
          Length = 112

 Score =  154 bits (390), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 79/110 (71%), Positives = 93/110 (84%)

Query: 1   MHPYLLLGIAIVAEVIATSALRAAEGFTRLLPSIMVVIGYAVAFLCLSLTLKSIPVGIVY 60
           + PY LLGIAIVAEVIATSA+RA+EGF+RLLPS +VV+GY VAF CLSLTLKSIPVGIVY
Sbjct: 3   LPPYALLGIAIVAEVIATSAMRASEGFSRLLPSAVVVLGYGVAFYCLSLTLKSIPVGIVY 62

Query: 61  AIWSGLGIVLISVVAYFLYGQSLDLPAIIGMALILVGVVVLNLFSKSTVH 110
           A+WSG GIVLI++VA  LY Q  D+PA+IG+ LI+ GV VLN+FSK   H
Sbjct: 63  AVWSGAGIVLITLVAVLLYRQVPDVPAVIGLGLIIAGVAVLNMFSKMQAH 112


>ref|YP_004228384.1| small multidrug resistance protein [Burkholderia sp. CCGE1001]
 gb|ADX55324.1| small multidrug resistance protein [Burkholderia sp. CCGE1001]
          Length = 112

 Score =  154 bits (389), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 77/108 (71%), Positives = 93/108 (86%)

Query: 3   PYLLLGIAIVAEVIATSALRAAEGFTRLLPSIMVVIGYAVAFLCLSLTLKSIPVGIVYAI 62
           PY LLGIAIVAEVIATSA+RA++GF+R +PS +VV+GYAVAF CLSLTL+SIPVGIVYA+
Sbjct: 5   PYALLGIAIVAEVIATSAMRASDGFSRFVPSAVVVLGYAVAFYCLSLTLRSIPVGIVYAV 64

Query: 63  WSGLGIVLISVVAYFLYGQSLDLPAIIGMALILVGVVVLNLFSKSTVH 110
           WSG GIVLI++VA  LYGQ  D+PA+IG+ LI+ GV VLN+FSK   H
Sbjct: 65  WSGAGIVLITLVALLLYGQVPDVPAVIGLGLIIAGVAVLNMFSKMQAH 112


>ref|YP_544992.1| small multidrug resistance protein [Methylobacillus flagellatus KT]
 ref|YP_545136.1| small multidrug resistance protein [Methylobacillus flagellatus KT]
 gb|ABE49151.1| small multidrug resistance protein [Methylobacillus flagellatus KT]
 gb|ABE49295.1| small multidrug resistance protein [Methylobacillus flagellatus KT]
          Length = 110

 Score =  154 bits (389), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 74/110 (67%), Positives = 95/110 (86%)

Query: 1   MHPYLLLGIAIVAEVIATSALRAAEGFTRLLPSIMVVIGYAVAFLCLSLTLKSIPVGIVY 60
           M  ++ LGIAI AEV+ATSAL+A++GFT+LLPS +V++GYA AF  L+LTL+SIPVG+ Y
Sbjct: 1   MQHWIYLGIAITAEVVATSALKASDGFTQLLPSTLVIVGYATAFYFLALTLRSIPVGVAY 60

Query: 61  AIWSGLGIVLISVVAYFLYGQSLDLPAIIGMALILVGVVVLNLFSKSTVH 110
           A+WSGLGIVL+SV+A  LYGQ LDLPA+IGMALI+ GVVV+ LFS++T H
Sbjct: 61  AVWSGLGIVLVSVIASLLYGQKLDLPAVIGMALIIAGVVVMQLFSRTTGH 110


>ref|ZP_06898817.1| DMT superfamily multidrug transporter EmrE [Roseomonas cervicalis
           ATCC 49957]
 gb|EFH09497.1| DMT superfamily multidrug transporter EmrE [Roseomonas cervicalis
           ATCC 49957]
          Length = 113

 Score =  152 bits (385), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 74/106 (69%), Positives = 93/106 (87%)

Query: 2   HPYLLLGIAIVAEVIATSALRAAEGFTRLLPSIMVVIGYAVAFLCLSLTLKSIPVGIVYA 61
           HP+ +L  AIVAEVIATSAL+A++GFTRLLPS++VV GYAVAF CLSLTL+S+PVG+VYA
Sbjct: 7   HPWTILACAIVAEVIATSALKASDGFTRLLPSLLVVAGYAVAFFCLSLTLRSMPVGLVYA 66

Query: 62  IWSGLGIVLISVVAYFLYGQSLDLPAIIGMALILVGVVVLNLFSKS 107
           +WSG+GIVL+SV    +YGQ LD PA+IG+ALI+ GV+V+NLFS S
Sbjct: 67  LWSGIGIVLVSVAGLVIYGQRLDAPALIGIALIMAGVLVINLFSDS 112