BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0154.p (586 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778065.1| acetyl/propionyl-CoA carboxylase subunit alp... 751 0.0 ref|YP_004754895.1| methylcrotonyl-CoA carboxylase biotin-contai... 749 0.0 ref|YP_001795522.1| methylcrotonoyl-CoA carboxylase subunit alph... 729 0.0 ref|YP_724704.1| biotin carboxylase [Ralstonia eutropha H16] >gi... 725 0.0 ref|YP_294377.1| 3-methylcrotonoyl-CoA carboxylase, alpha subuni... 725 0.0 >ref|YP_003778065.1| acetyl/propionyl-CoA carboxylase subunit alpha [Herbaspirillum seropedicae SmR1] gb|ADJ66157.1| acetyl/propionyl-CoA carboxylase, alpha subunit protein [Herbaspirillum seropedicae SmR1] Length = 671 Score = 751 bits (1939), Expect = 0.0, Method: Compositional matrix adjust. Identities = 407/567 (71%), Positives = 458/567 (80%), Gaps = 12/567 (2%) Query: 20 NAMGSKSAAKALMEKANVPLVPGYHGDNQEADFLQKEADRISYPVLLKASAGGGGKGMRI 79 AMGSK+AAKALME+A VPLVPGYHG+ QE+ L +ADRI YPVLLKASAGGGGKGMR+ Sbjct: 111 EAMGSKAAAKALMEQAAVPLVPGYHGEEQESGLLHSQADRIGYPVLLKASAGGGGKGMRV 170 Query: 80 VEKSEDFKAALASCKREAINSFGDDKVLVERYLTRPRHIEIQVFADSRGECVYLFERDCS 139 VE+SEDF AALASCKREAI SFGDD+VLVE+YLTRPRHIEIQVFAD G CVYLFERDCS Sbjct: 171 VERSEDFDAALASCKREAIASFGDDRVLVEKYLTRPRHIEIQVFADGHGHCVYLFERDCS 230 Query: 140 VQRRHQKVLEEAPAPGMSEERRRAMGDAAVAAAKAVGYVGAGTVEFIADYSNGEDGSFYF 199 VQRRHQKVLEEAPAPGMSEERR AMG+AAVAAA+AVGYVGAGTVEFIA+ +DGSFYF Sbjct: 231 VQRRHQKVLEEAPAPGMSEERRAAMGEAAVAAARAVGYVGAGTVEFIAN----QDGSFYF 286 Query: 200 MEMNTRLQVEHPVTEMITGLDLVEWQLRVAAGENLPLRQEQLQLNGHAIEARIYAENPEK 259 MEMNTRLQVEHPVTEMITGLDLVEWQLRVAAG+ LPL+QEQL+++GHAIEARIYAENPEK Sbjct: 287 MEMNTRLQVEHPVTEMITGLDLVEWQLRVAAGQALPLKQEQLRIHGHAIEARIYAENPEK 346 Query: 260 GFLPAIGTLRYLHTPPAVHFRV-DSHVQTPAAVRIDSGVREGDAISPFYDPMIAKLIVWG 318 GFLPAIGTL + + AV FR+ S PA VRID+GVREGDAISPFYDPMIAKLIVWG Sbjct: 347 GFLPAIGTLTRMRSAAAVEFRLGQSAPGDPAHVRIDAGVREGDAISPFYDPMIAKLIVWG 406 Query: 319 KDRDAALANMAAALAQYRIVGLATNIGFLQRLVAGQAFSTADLDTGLIERNHDALFPTLQ 378 DRDAAL NM ALAQY++VGLATNI FLQRLVAGQAFSTA LDTGLIER+ D LFP Sbjct: 407 PDRDAALRNMQRALAQYQVVGLATNIAFLQRLVAGQAFSTAALDTGLIERHRDTLFPPPS 466 Query: 379 PASTATLALATSLLLAQEAGDAGDARDPWAQTSGWRMNGSLLRVLRFADEAGDAGEYRIG 438 T TLALA + +L QE A + DPW+Q +GWR+N LLR LRF +AGD + Sbjct: 467 SPDTETLALAIAAILQQEHAQA-ERSDPWSQRNGWRLNTRLLRTLRFEHDAGDT---TVQ 522 Query: 439 VEYRGD-QTWILHRDGAQHGLCFERQGDTDLRVTLDDNIVAGNVVRDGDIFHVFH-QGRH 496 ++Y GD Q W L +G H L L ++LD + +V+R+G+ HVF G+H Sbjct: 523 LDYAGDGQHWSLLTNGQTHALQLHAADGDTLIISLDGRTLRADVLREGEWLHVFDAHGQH 582 Query: 497 AVLTWDDPLAHAGHVESEGGRLTAPMPGKIVAVLVEKGHGVTKGAPLLIMEAMKMEHTIA 556 + L DPLAHAGH E+EGGRLTAPMPGKIVA+LV+KG V G PLLIMEAMKMEHTIA Sbjct: 583 S-LRHVDPLAHAGHSEAEGGRLTAPMPGKIVALLVQKGASVAHGTPLLIMEAMKMEHTIA 641 Query: 557 APADGVIDELLYAVGDQVTEGAQLLAF 583 APADGV+++LLYAVGDQV EGAQLL F Sbjct: 642 APADGVVEDLLYAVGDQVAEGAQLLEF 668 >ref|YP_004754895.1| methylcrotonyl-CoA carboxylase biotin-containing subunit [Collimonas fungivorans Ter331] gb|AEK64072.1| Methylcrotonyl-CoA carboxylase biotin-containing subunit [Collimonas fungivorans Ter331] Length = 692 Score = 749 bits (1933), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/569 (71%), Positives = 464/569 (81%), Gaps = 15/569 (2%) Query: 20 NAMGSKSAAKALMEKANVPLVPGYHGDNQEADFLQKEADRISYPVLLKASAGGGGKGMRI 79 +AMGSKSAAK LME A VPLVPGYHG+ Q+ADFLQ++AD+I+YPVLLKASAGGGGKGMRI Sbjct: 131 SAMGSKSAAKELMETAQVPLVPGYHGETQDADFLQQQADKITYPVLLKASAGGGGKGMRI 190 Query: 80 VEKSEDFKAALASCKREAINSFGDDKVLVERYLTRPRHIEIQVFADSRGECVYLFERDCS 139 VE+S DFKAALASCKREAINSFGDDKVLVERYLTRPRHIEIQVFAD++G+CVYLFERDCS Sbjct: 191 VEQSADFKAALASCKREAINSFGDDKVLVERYLTRPRHIEIQVFADTQGDCVYLFERDCS 250 Query: 140 VQRRHQKVLEEAPAPGMSEERRRAMGDAAVAAAKAVGYVGAGTVEFIADYSNGEDGSFYF 199 VQRRHQKVLEEAPAPGM+ ERRRAMG+AAVAAAKAVGYVGAGTVEFIA+ +DGSFYF Sbjct: 251 VQRRHQKVLEEAPAPGMTPERRRAMGEAAVAAAKAVGYVGAGTVEFIAN----QDGSFYF 306 Query: 200 MEMNTRLQVEHPVTEMITGLDLVEWQLRVAAGENLPLRQEQLQLNGHAIEARIYAENPEK 259 MEMNTRLQVEHPVTEMITGLDLVEWQLRVA+GE LPL+QEQLQL+GHA+EARIYAENP+K Sbjct: 307 MEMNTRLQVEHPVTEMITGLDLVEWQLRVASGEPLPLKQEQLQLSGHALEARIYAENPDK 366 Query: 260 GFLPAIGTLRYLHTPPAVHFRVDSHVQTPAAVRIDSGVREGDAISPFYDPMIAKLIVWGK 319 GFLP+IGTLR+LHTP A F V + + VRIDSGVR+GDAISPFYDPMIAKLIVWG+ Sbjct: 367 GFLPSIGTLRHLHTPAATEFEVSK--SSASIVRIDSGVRQGDAISPFYDPMIAKLIVWGQ 424 Query: 320 DRDAALANMAAALAQYRIVGLATNIGFLQRLVAGQAFSTADLDTGLIERNHDALFPTLQP 379 DR ALA M+AALAQY+IVGLA+N+ FLQRL+AG+AFS ADLDTGLIER+HD LFP P Sbjct: 425 DRQQALAAMSAALAQYQIVGLASNVKFLQRLIAGKAFSEADLDTGLIERHHDTLFPAAVP 484 Query: 380 ASTATLALATSLLLAQEAGDAGDA-RDPWAQTSGWRMNGSLLRVLRFADEAGDAGEYRIG 438 + LALA + LL E A +A DPW T GWR+NGSL R L F D D + Sbjct: 485 VAIEVLALAAASLLLSERNAANNADSDPWTSTDGWRLNGSLQRRLAFVD---DGQASPLD 541 Query: 439 VEYRGDQTWILHRDGAQ----HGLCFERQGDTDLRVTLDDNIVAGNVVRDGDIFHVFHQG 494 V Y + W+L + + + +Q + ++L D VAG VVR+G+ FHVF+ G Sbjct: 542 VTYEAGR-WLLRHEQFEAQTFRQMTVLQQDGNAIEISLGDRTVAGTVVREGEQFHVFYAG 600 Query: 495 RHAVLTWDDPLAHAGHVESEGGRLTAPMPGKIVAVLVEKGHGVTKGAPLLIMEAMKMEHT 554 H L + DPL HAG E+EGGRLTAPMPGKIVA+LV +G V KGAPLLIMEAMKMEHT Sbjct: 601 SHYTLAYVDPLLHAGDSEAEGGRLTAPMPGKIVALLVTQGEQVKKGAPLLIMEAMKMEHT 660 Query: 555 IAAPADGVIDELLYAVGDQVTEGAQLLAF 583 IAAP DG+++ELLYAVGDQV+E AQLL F Sbjct: 661 IAAPTDGLVEELLYAVGDQVSESAQLLVF 689 >ref|YP_001795522.1| methylcrotonoyl-CoA carboxylase subunit alpha [Cupriavidus taiwanensis LMG 19424] emb|CAP62800.1| putative Methylcrotonoyl-CoA carboxylase alpha subunit [Cupriavidus taiwanensis LMG 19424] Length = 672 Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/570 (67%), Positives = 441/570 (77%), Gaps = 17/570 (2%) Query: 20 NAMGSKSAAKALMEKANVPLVPGYHGDNQEADFLQKEADRISYPVLLKASAGGGGKGMRI 79 +AMGSKSAAK LMEKA+VPLVPGYHG++Q+ L++EADRI YPVLLKASAGGGGKGMR+ Sbjct: 111 HAMGSKSAAKQLMEKASVPLVPGYHGEDQDPALLRREADRIGYPVLLKASAGGGGKGMRV 170 Query: 80 VEKSEDFKAALASCKREAINSFGDDKVLVERYLTRPRHIEIQVFADSRGECVYLFERDCS 139 VE + F+AALAS KREA SFGDDKVLVE+YLTRPRHIEIQVFAD+ G CVYLFERDCS Sbjct: 171 VESGDGFEAALASVKREASASFGDDKVLVEKYLTRPRHIEIQVFADTHGNCVYLFERDCS 230 Query: 140 VQRRHQKVLEEAPAPGMSEERRRAMGDAAVAAAKAVGYVGAGTVEFIADYSNGEDGSFYF 199 VQRRHQKVLEEAPAPGM+EERRRAMG+AAVAAAKAVGYVGAGTVEFIA+ ++GSFYF Sbjct: 231 VQRRHQKVLEEAPAPGMTEERRRAMGEAAVAAAKAVGYVGAGTVEFIAN----QNGSFYF 286 Query: 200 MEMNTRLQVEHPVTEMITGLDLVEWQLRVAAGENLPLRQEQLQLNGHAIEARIYAENPEK 259 MEMNTRLQVEHPVTEMITG DLVEWQLRVAAGE LPL QEQL+++GHA+EARIYAENP+K Sbjct: 287 MEMNTRLQVEHPVTEMITGQDLVEWQLRVAAGEPLPLAQEQLRIDGHALEARIYAENPDK 346 Query: 260 GFLPAIGTLRYLHTPPAVHFRVDSHVQTPAAVRIDSGVREGDAISPFYDPMIAKLIVWGK 319 FLP+ GTLR+L TPPAV F PA VRID+GVREGD ISPFYDPMIAKLIVWGK Sbjct: 347 QFLPSTGTLRFLRTPPAVQFMRGEDAHGPAGVRIDAGVREGDTISPFYDPMIAKLIVWGK 406 Query: 320 DRDAALANMAAALAQYRIVGLATNIGFLQRLVAGQAFSTADLDTGLIERNHDALFPTLQP 379 DRD ALA M ALA Y +VGL+TN+ FLQRLV +AF TADLDTGLI RN LFP P Sbjct: 407 DRDEALARMRQALAAYHVVGLSTNVAFLQRLVKSEAFRTADLDTGLIARNEAVLFPPPAP 466 Query: 380 ASTATLALATSLLLAQEAG----DAGDARDPWAQTSGWRMNGSLLRVLRFADEAGDAGEY 435 +ALA + LL +EA DA D PW + WR+NG + R LRF GE Sbjct: 467 VGMEVIALAVAALLDREARELRVDAADPHSPWTRAGAWRLNGGMSRTLRFG-----YGEQ 521 Query: 436 RIGVEYRGDQ--TWILHRDGAQHGLCFERQGDTDLRVTLDDNIVAGNVVRDGDIFHVFHQ 493 + V+ + + +++ D A + Q D DLRV L G V DGD FHVF+ Sbjct: 522 VLDVKLDSNARGSTLIYADQAAP-FAYTCQAD-DLRVNLGTRRTHGQVHADGDTFHVFYA 579 Query: 494 GRHAVLTWDDPLAHAGHVESEGGRLTAPMPGKIVAVLVEKGHGVTKGAPLLIMEAMKMEH 553 GRH L W DPLAHAG E EGG+LTAPMPGK++AV+VE G VT+G PLL+MEAMKMEH Sbjct: 580 GRHVSLAWLDPLAHAGETEGEGGKLTAPMPGKVIAVMVEAGSTVTRGTPLLVMEAMKMEH 639 Query: 554 TIAAPADGVIDELLYAVGDQVTEGAQLLAF 583 TI+APADGV+ E+LY VG+QV EGAQLLAF Sbjct: 640 TISAPADGVVSEILYGVGEQVAEGAQLLAF 669 >ref|YP_724704.1| biotin carboxylase [Ralstonia eutropha H16] emb|CAJ91336.1| biotin carboxylase [Ralstonia eutropha H16] Length = 675 Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/568 (67%), Positives = 437/568 (76%), Gaps = 13/568 (2%) Query: 20 NAMGSKSAAKALMEKANVPLVPGYHGDNQEADFLQKEADRISYPVLLKASAGGGGKGMRI 79 +AMGSKSAAK LMEKA VPLVPGYHG++Q L++EADRI YPVLLKASAGGGGKGMR+ Sbjct: 111 HAMGSKSAAKQLMEKAAVPLVPGYHGEDQGPALLRREADRIGYPVLLKASAGGGGKGMRV 170 Query: 80 VEKSEDFKAALASCKREAINSFGDDKVLVERYLTRPRHIEIQVFADSRGECVYLFERDCS 139 VE + F+AALAS KREA SFGDDKVLVE+YLTRPRHIEIQVFAD+ G CVYLFERDCS Sbjct: 171 VESGDAFEAALASVKREASASFGDDKVLVEKYLTRPRHIEIQVFADTHGNCVYLFERDCS 230 Query: 140 VQRRHQKVLEEAPAPGMSEERRRAMGDAAVAAAKAVGYVGAGTVEFIADYSNGEDGSFYF 199 VQRRHQKVLEEAPAPGM+E RRRAMG+AAVAAAKAVGYVGAGTVEFIA+ +DGSFYF Sbjct: 231 VQRRHQKVLEEAPAPGMTEARRRAMGEAAVAAAKAVGYVGAGTVEFIAN----QDGSFYF 286 Query: 200 MEMNTRLQVEHPVTEMITGLDLVEWQLRVAAGENLPLRQEQLQLNGHAIEARIYAENPEK 259 MEMNTRLQVEHPVTEMITG DLVEWQLRVAAGE LPL Q+QL+++GHA+EARIYAENP+K Sbjct: 287 MEMNTRLQVEHPVTEMITGQDLVEWQLRVAAGEALPLTQDQLRIDGHALEARIYAENPDK 346 Query: 260 GFLPAIGTLRYLHTPPAVHFRVDSHVQTPAAVRIDSGVREGDAISPFYDPMIAKLIVWGK 319 FLP+ GTLR+L TPPAV F V PA +RID+GVREGD ISPFYDPMIAKLIVWGK Sbjct: 347 QFLPSTGTLRFLRTPPAVQFMRGEDVHGPAGIRIDAGVREGDTISPFYDPMIAKLIVWGK 406 Query: 320 DRDAALANMAAALAQYRIVGLATNIGFLQRLVAGQAFSTADLDTGLIERNHDALFPTLQP 379 DRD ALA M ALA Y +VGL+TN+ FLQRLV+ QAF TADLDTGLIERN LFP P Sbjct: 407 DRDEALARMRQALASYHVVGLSTNVAFLQRLVSSQAFRTADLDTGLIERNEKVLFPPPAP 466 Query: 380 ASTATLALATSLLLAQEAG----DAGDARDPWAQTSGWRMNGSLLRVLRFADEAGDAGEY 435 +ALA + L +EA DA D PW WR+NG + R LRF E Sbjct: 467 VGLEVIALAVAALFDREARERRIDAADQHSPWTHGGAWRLNGGVSRTLRFG-YGEQVLEV 525 Query: 436 RIGVEYRGDQTWILHRDGAQHGLCFERQGDTDLRVTLDDNIVAGNVVRDGDIFHVFHQGR 495 + RG + +++ D A C Q D D+R+ L G V DG+ FHVF+ GR Sbjct: 526 TLSTNERG--STLIYADQAAPFAC-TCQAD-DIRINLGTRRAHGQVHADGETFHVFYAGR 581 Query: 496 HAVLTWDDPLAHAGHVESEGGRLTAPMPGKIVAVLVEKGHGVTKGAPLLIMEAMKMEHTI 555 H L W DPLAHAG ESEGG+LTAPMPGK++AV+VE G VT+G PLL+MEAMKMEHTI Sbjct: 582 HVSLAWLDPLAHAGETESEGGKLTAPMPGKVIAVMVEAGSTVTRGTPLLVMEAMKMEHTI 641 Query: 556 AAPADGVIDELLYAVGDQVTEGAQLLAF 583 +AP DGV+ E+LY VG+QV EGAQLLAF Sbjct: 642 SAPVDGVVSEVLYRVGEQVVEGAQLLAF 669 >ref|YP_294377.1| 3-methylcrotonoyl-CoA carboxylase, alpha subunit [Ralstonia eutropha JMP134] gb|AAZ59533.1| 3-methylcrotonoyl-CoA carboxylase, alpha subunit [Ralstonia eutropha JMP134] Length = 674 Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/571 (67%), Positives = 436/571 (76%), Gaps = 13/571 (2%) Query: 20 NAMGSKSAAKALMEKANVPLVPGYHGDNQEADFLQKEADRISYPVLLKASAGGGGKGMRI 79 +AMGSKSAAK LMEKA+VPLVPGYHG++Q+ L++E+DRI YPVLLKASAGGGGKGMR+ Sbjct: 111 HAMGSKSAAKQLMEKASVPLVPGYHGEDQDPALLRRESDRIGYPVLLKASAGGGGKGMRV 170 Query: 80 VEKSEDFKAALASCKREAINSFGDDKVLVERYLTRPRHIEIQVFADSRGECVYLFERDCS 139 VE + F+AALAS KREA SFGDDKVLVE+YLTRPRHIEIQVFAD+ G CVYLFERDCS Sbjct: 171 VESGDAFEAALASVKREASASFGDDKVLVEKYLTRPRHIEIQVFADTHGNCVYLFERDCS 230 Query: 140 VQRRHQKVLEEAPAPGMSEERRRAMGDAAVAAAKAVGYVGAGTVEFIADYSNGEDGSFYF 199 VQRRHQKVLEEAPAPGM+EERRRAMG+AAVAAAKAVGYVGAGTVEFIA+ +DGSFYF Sbjct: 231 VQRRHQKVLEEAPAPGMTEERRRAMGEAAVAAAKAVGYVGAGTVEFIAN----QDGSFYF 286 Query: 200 MEMNTRLQVEHPVTEMITGLDLVEWQLRVAAGENLPLRQEQLQLNGHAIEARIYAENPEK 259 MEMNTRLQVEHPVTEMITG DLVEWQLRVAAGE LPL+QEQL ++GHA+EARIYAENP+K Sbjct: 287 MEMNTRLQVEHPVTEMITGQDLVEWQLRVAAGEPLPLKQEQLHIHGHALEARIYAENPDK 346 Query: 260 GFLPAIGTLRYLHTPPAVHFRVDSHVQTPAAVRIDSGVREGDAISPFYDPMIAKLIVWGK 319 FLP+ GTLR+L TPPAV F PA VRID+GVREGD ISP+YDPMIAKLIVWGK Sbjct: 347 QFLPSTGTLRFLRTPPAVQFMRGGDAHGPAGVRIDAGVREGDTISPYYDPMIAKLIVWGK 406 Query: 320 DRDAALANMAAALAQYRIVGLATNIGFLQRLVAGQAFSTADLDTGLIERNHDALFPTLQP 379 DRD ALA M ALA Y +VGL+TN+ FLQRLV +AF TADLDTGLIERN LFP P Sbjct: 407 DRDEALARMRQALAAYHVVGLSTNVAFLQRLVKSEAFRTADLDTGLIERNEATLFPPPAP 466 Query: 380 ASTATLALATSLLLAQEAG----DAGDARDPWAQTSGWRMNGSLLRVLRFADEAGDAGEY 435 +ALA + LL +E D D PW WR+NG R LRFA + Sbjct: 467 VGMEIIALAVAALLDRETRERHIDTADQYSPWTHAGAWRLNGGATRTLRFA-YGSHTLDV 525 Query: 436 RIGVEYRGDQTWILHRDGAQHGLCFERQGDTDLRVTLDDNIVAGNVVRDGDIFHVFHQGR 495 + RG + C Q D D+RV L G V +GD FHVF+ GR Sbjct: 526 TLTANARGSTLIYADQAAPFKAAC---QAD-DIRVDLGTRRAHGQVHVEGDDFHVFNAGR 581 Query: 496 HAVLTWDDPLAHAGHVESEGGRLTAPMPGKIVAVLVEKGHGVTKGAPLLIMEAMKMEHTI 555 HAVL W DPLAHAG E EGG+LTAPMPGK++AV+VE G VT+G PLL+MEAMKMEHTI Sbjct: 582 HAVLGWLDPLAHAGETEGEGGKLTAPMPGKVIAVMVEPGSTVTRGTPLLVMEAMKMEHTI 641 Query: 556 AAPADGVIDELLYAVGDQVTEGAQLLAFTPG 586 +APADGV+ E+L+ VG+QVTEGAQLLAF G Sbjct: 642 SAPADGVVSEVLFGVGEQVTEGAQLLAFATG 672