BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0149.p (589 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774726.1| methyl-accepting chemotaxis domain-containin... 511 e-142 ref|ZP_03455080.1| methyl-accepting chemotaxis protein [Burkhold... 444 e-122 ref|ZP_04816880.1| methyl-accepting chemotaxis protein [Burkhold... 444 e-122 ref|YP_108474.1| putative methyl-accepting chemotaxis protein [B... 444 e-122 ref|YP_001058833.1| methyl-accepting chemotaxis protein [Burkhol... 443 e-122 >ref|YP_003774726.1| methyl-accepting chemotaxis domain-containing protein [Herbaspirillum seropedicae SmR1] gb|ADJ62818.1| methyl-accepting chemotaxis domain-containing protein [Herbaspirillum seropedicae SmR1] Length = 568 Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust. Identities = 280/551 (50%), Positives = 379/551 (68%), Gaps = 26/551 (4%) Query: 5 FTLKRSFFFF--IILAALSLLMFGALQMILRAQHEIERAGDSRYDSYKLANEVRNNSEHL 62 F++++ F +I ++L++ AL + R + A +SRY S+ LA E+R +S+ L Sbjct: 9 FSIRQIFIMLTAVITVLMTLIVLAALA-VDRYDARLNAANESRYASFLLATELRQSSDDL 67 Query: 63 TQSVRSYVVTGDPRFET---------------------VYWDIVAVSSGKKPRAD-GRTM 100 T+ R+YVVTGDP +E +YWD VA + GK PR D + + Sbjct: 68 TRLARTYVVTGDPSYEQQYEAILDIRNGKKARPEHYGRIYWDFVA-ADGKAPRPDSNQHV 126 Query: 101 PITDLMKQAGFTDQEFARLNEAQSLSTALIKTEEVAMHMVKGEYDDGTGKFTRKDAPDLE 160 +TDLM+ AGFT E +L EA++ S AL+KTE +AM+MVKG Y D G FT++ PDL Sbjct: 127 ALTDLMRAAGFTAAEMGKLEEAKNNSDALVKTEVIAMNMVKGLYADAQGNFTKRADPDLA 186 Query: 161 KARKLVHDDVYEKNAASIMRPINEFEKLMDQRTRGELDKARRDGSIAYAVGLAMLGVMLA 220 +AR+L+H+ Y A IMRP++EF L+D RT +++ AR + + +++ + L Sbjct: 187 QARELMHNHAYHVYKAKIMRPVDEFFALLDARTTEQVESARAQATHMATLFYSLIAIALV 246 Query: 221 ISVAVLYALYVLIKKQLDKSLAVAERLATGDLTAELEVERDDEIGRLMGAINGIGHGLAS 280 + L +Y I+ L + +VA R+A GDLTA+++ E G L+ A+ + GL + Sbjct: 247 VLACTLMLVYHAIRNPLAHAASVARRVAHGDLTAQIDPAIKGETGELLEALTIMQSGLQT 306 Query: 281 VVGNVRTGTETINVASREIATGNADLSNRTESQASSLEETASSMEELTSTVRQNADNARQ 340 +V +VR G + IN ++ EIA+G DLS+RTE QASSLEETASSMEELTSTV+QNA NAR Sbjct: 307 IVLDVRNGAQYINTSANEIASGTLDLSSRTEQQASSLEETASSMEELTSTVKQNAGNARL 366 Query: 341 ANSLVTSASELAVKGGKVVGDVVHTMGSIKESSSKIVDIISVIDGIAFQTNILALNAAVE 400 A+ L +AS +AV+GG+VV VV TMG+I ESS +IVDII+VIDGIAFQTNILALNAAVE Sbjct: 367 ASELANTASGVAVRGGEVVARVVDTMGAINESSKRIVDIIAVIDGIAFQTNILALNAAVE 426 Query: 401 AARAGEQGRGFAVVASEVRSLAQRSASAAKEIKELISDSVGKVDAGGKLVDEAGATMGEI 460 AARAGEQGRGFAVVA+EVRSLAQRSA+AAKEIK LI +SV KV+AG LV+EAG+TM E+ Sbjct: 427 AARAGEQGRGFAVVATEVRSLAQRSAAAAKEIKTLIDNSVSKVEAGSTLVNEAGSTMREV 486 Query: 461 VTSVKHVADIMGEITAASQEQSTGIEEVNRAITQMDEITQQNAALVEQAAAAAESLQEQA 520 V SV+ V +I+ I+ ASQEQ++GIE++ +AI QMD++TQQNAALVEQA+AA+ES+Q QA Sbjct: 487 VESVQRVTEIITGISNASQEQASGIEQIQQAINQMDQVTQQNAALVEQASAASESMQMQA 546 Query: 521 DLLAKAVSVFK 531 L V FK Sbjct: 547 HKLTDLVGAFK 557 >ref|ZP_03455080.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei 576] gb|EEC33458.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei 576] Length = 711 Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust. Identities = 267/556 (48%), Positives = 368/556 (66%), Gaps = 26/556 (4%) Query: 5 FTLKRSFFFFIILAALSLLMFGALQMILRA-QHEIERAGDSRYDSYKLANEVRNNSEHLT 63 F+L+R + L A++ + G Q L A H + +A RY S +LANE+R +S+ LT Sbjct: 148 FSLRRYASLLLGLLAVAAVAIGLCQWRLDAANHRVAQAYQQRYVSTQLANELRRSSDDLT 207 Query: 64 QSVRSYVVTGDPRFETVYWDIVAVSSGKKPR-------------AD-------GRTMPIT 103 + R+YV TGD ++E Y +I+A+ SGK PR AD G T+ + Sbjct: 208 RLARTYVATGDAKWEQQYNEILAIRSGKAPRPLDYDRIYWDFRAADEPLRAEQGETISLQ 267 Query: 104 DLMKQAGFTDQEFARLNEAQSLSTALIKTEEVAMHMVKGEYDDGTGKFTRKDAPDLEKAR 163 ++MK+AGFTD+EFA+L++A+ S L+KTE VAM++VKG D G FT++ PDLEKAR Sbjct: 268 EMMKRAGFTDEEFAKLHDAEQNSNDLVKTETVAMNLVKGLTPDDAGHFTKQGPPDLEKAR 327 Query: 164 KLVHDDVYEKNAASIMRPINEFEKLMDQRTRGELDKARRDGSIAYAVGLAMLGVMLAISV 223 L+ D Y + A IM PI++F KL+D RT G + +A+ + A+ +LA Sbjct: 328 ALMFDANYHRFKAKIMHPIDDFLKLLDARTEGAIARAQASAQTWKIISAAVAIGILAFFA 387 Query: 224 AVLYALYVLIKKQLDKSLAVAERLATGDLTAELEVER-----DDEIGRLMGAINGIGHGL 278 +L+ ++ + L+ + + A R+A GDLT+ + R DEI R+M A+ + GL Sbjct: 388 LMLHMMFKRVLAGLEAAASTASRVAAGDLTSHFDAHRVDPQAKDEISRVMRALQTMNDGL 447 Query: 279 ASVVGNVRTGTETINVASREIATGNADLSNRTESQASSLEETASSMEELTSTVRQNADNA 338 +V +VR+GT+TI AS EI GN DLS RTE QA+SL+ETA+SM ELT+TV+ N +NA Sbjct: 448 VRIVTDVRSGTDTIATASHEIMAGNNDLSARTEQQAASLQETAASMSELTATVKLNLENA 507 Query: 339 RQANSLVTSASELAVKGGKVVGDVVHTMGSIKESSSKIVDIISVIDGIAFQTNILALNAA 398 RQAN + ++A KG V +V T+ +I +S KI DIIS+I+GIAFQTNILALNAA Sbjct: 508 RQANMIGSNAVSTVEKGSVSVEQLVTTVNAISTNSGKIADIISLIEGIAFQTNILALNAA 567 Query: 399 VEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKELISDSVGKVDAGGKLVDEAGATMG 458 VEAARAGEQGRGFAVVASEVRSLAQRS+SAAKEIK+LI S+ V G DE G + Sbjct: 568 VEAARAGEQGRGFAVVASEVRSLAQRSSSAAKEIKDLIETSIDTVRDGVSKADEVGQHIV 627 Query: 459 EIVTSVKHVADIMGEITAASQEQSTGIEEVNRAITQMDEITQQNAALVEQAAAAAESLQE 518 E+ +++ VAD++GEITAAS+EQ+ GIE+V+ A++QMD +TQQNAALVEQAAAA++++ + Sbjct: 628 EVKQAIRRVADLVGEITAASEEQTRGIEQVDAAVSQMDRVTQQNAALVEQAAAASKAMDD 687 Query: 519 QADLLAKAVSVFKLSG 534 QA L A S+FKL G Sbjct: 688 QAGNLRAAASIFKLPG 703 >ref|ZP_04816880.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei 1106b] gb|EES27505.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei 1106b] Length = 711 Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust. Identities = 267/556 (48%), Positives = 368/556 (66%), Gaps = 26/556 (4%) Query: 5 FTLKRSFFFFIILAALSLLMFGALQMILRA-QHEIERAGDSRYDSYKLANEVRNNSEHLT 63 F+L+R + L A++ + G Q L A H + +A RY S +LANE+R +S+ LT Sbjct: 148 FSLRRYASLLLGLLAVAAVAIGLCQWRLDAANHRVAQAYQQRYVSTQLANELRRSSDDLT 207 Query: 64 QSVRSYVVTGDPRFETVYWDIVAVSSGKKPR-------------AD-------GRTMPIT 103 + R+YV TGD ++E Y +I+A+ SGK PR AD G T+ + Sbjct: 208 RLARTYVATGDAKWEQQYNEILAIRSGKAPRPLDYDRIYWDFRAADEPLRAEQGETISLQ 267 Query: 104 DLMKQAGFTDQEFARLNEAQSLSTALIKTEEVAMHMVKGEYDDGTGKFTRKDAPDLEKAR 163 ++MK+AGFTD+EFA+L++A+ S L+KTE VAM++VKG D G FT++ PDLEKAR Sbjct: 268 EMMKRAGFTDEEFAKLHDAEQNSNDLVKTETVAMNLVKGLTPDDAGHFTKQGPPDLEKAR 327 Query: 164 KLVHDDVYEKNAASIMRPINEFEKLMDQRTRGELDKARRDGSIAYAVGLAMLGVMLAISV 223 L+ D Y + A IM PI++F KL+D RT G + +A+ + A+ +LA Sbjct: 328 ALMFDANYHRFKAKIMHPIDDFLKLLDARTEGAIARAQASAQTWKIISAAVAIGILAFFA 387 Query: 224 AVLYALYVLIKKQLDKSLAVAERLATGDLTAELEVER-----DDEIGRLMGAINGIGHGL 278 +L+ ++ + L+ + + A R+A GDLT+ + R DEI R+M A+ + GL Sbjct: 388 LMLHMMFKRVLAGLEAAASTASRVAAGDLTSHFDAHRVDPQAKDEISRVMRALQTMNDGL 447 Query: 279 ASVVGNVRTGTETINVASREIATGNADLSNRTESQASSLEETASSMEELTSTVRQNADNA 338 +V +VR+GT+TI AS EI GN DLS RTE QA+SL+ETA+SM ELT+TV+ N +NA Sbjct: 448 VRIVTDVRSGTDTIATASHEIMAGNNDLSARTEQQAASLQETAASMSELTATVKLNLENA 507 Query: 339 RQANSLVTSASELAVKGGKVVGDVVHTMGSIKESSSKIVDIISVIDGIAFQTNILALNAA 398 RQAN + ++A KG V +V T+ +I +S KI DIIS+I+GIAFQTNILALNAA Sbjct: 508 RQANMIGSNAVSTVEKGSVSVEQLVTTVNAISTNSGKIADIISLIEGIAFQTNILALNAA 567 Query: 399 VEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKELISDSVGKVDAGGKLVDEAGATMG 458 VEAARAGEQGRGFAVVASEVRSLAQRS+SAAKEIK+LI S+ V G DE G + Sbjct: 568 VEAARAGEQGRGFAVVASEVRSLAQRSSSAAKEIKDLIETSIDTVRDGVSKADEVGQHIV 627 Query: 459 EIVTSVKHVADIMGEITAASQEQSTGIEEVNRAITQMDEITQQNAALVEQAAAAAESLQE 518 E+ +++ VAD++GEITAAS+EQ+ GIE+V+ A++QMD +TQQNAALVEQAAAA++++ + Sbjct: 628 EVKQAIRRVADLVGEITAASEEQTRGIEQVDAAVSQMDRVTQQNAALVEQAAAASKAMDD 687 Query: 519 QADLLAKAVSVFKLSG 534 QA L A S+FKL G Sbjct: 688 QAGNLRAAASIFKLPG 703 >ref|YP_108474.1| putative methyl-accepting chemotaxis protein [Burkholderia pseudomallei K96243] ref|ZP_02498202.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei 112] ref|ZP_04965225.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei 406e] emb|CAH35874.1| putative methyl-accepting chemotaxis protein [Burkholderia pseudomallei K96243] gb|EDO85214.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei 406e] Length = 570 Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust. Identities = 259/526 (49%), Positives = 355/526 (67%), Gaps = 25/526 (4%) Query: 34 AQHEIERAGDSRYDSYKLANEVRNNSEHLTQSVRSYVVTGDPRFETVYWDIVAVSSGKKP 93 A H + +A RY S +LANE+R +S+ LT+ R+YV TGD ++E Y +I+A+ SGK P Sbjct: 37 ANHRVAQAYQQRYVSTQLANELRRSSDDLTRLARTYVATGDAKWEQQYNEILAIRSGKAP 96 Query: 94 R-------------AD-------GRTMPITDLMKQAGFTDQEFARLNEAQSLSTALIKTE 133 R AD G T+ + ++MK+AGFTD+EFA+L++A+ S L+KTE Sbjct: 97 RPLDYDRIYWDFRAADEPLRAEQGETISLQEMMKRAGFTDEEFAKLHDAEQNSNDLVKTE 156 Query: 134 EVAMHMVKGEYDDGTGKFTRKDAPDLEKARKLVHDDVYEKNAASIMRPINEFEKLMDQRT 193 VAM++VKG D G FT++ +PDLEKAR L+ D Y + A IM PI++F KL+D RT Sbjct: 157 TVAMNLVKGLTPDDAGHFTKQGSPDLEKARALMFDANYHRFKAKIMHPIDDFLKLLDART 216 Query: 194 RGELDKARRDGSIAYAVGLAMLGVMLAISVAVLYALYVLIKKQLDKSLAVAERLATGDLT 253 G + +A+ + A+ +LA +L+ ++ + L+ + + A R+A GDLT Sbjct: 217 EGAIARAQASAQTWKIISAAVAIGILAFFALMLHMMFKRVLAGLEAAASTASRVAAGDLT 276 Query: 254 AELEVER-----DDEIGRLMGAINGIGHGLASVVGNVRTGTETINVASREIATGNADLSN 308 + + R DEI R+M A+ + GL +V +VR+GT+TI AS EI GN DLS Sbjct: 277 SHFDAHRVDPQAKDEISRVMRALQTMNDGLVRIVTDVRSGTDTIATASHEIMAGNNDLSA 336 Query: 309 RTESQASSLEETASSMEELTSTVRQNADNARQANSLVTSASELAVKGGKVVGDVVHTMGS 368 RTE QA+SL+ETA+SM ELT+TV+ N +NARQAN + ++A KG V +V T+ + Sbjct: 337 RTEQQAASLQETAASMSELTATVKLNLENARQANMIGSNAVSTVEKGSVSVEQLVTTVNA 396 Query: 369 IKESSSKIVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASA 428 I +S KI DIIS+I+GIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRS+SA Sbjct: 397 ISTNSGKIADIISLIEGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSSSA 456 Query: 429 AKEIKELISDSVGKVDAGGKLVDEAGATMGEIVTSVKHVADIMGEITAASQEQSTGIEEV 488 AKEIK+LI S+ V G DE G + E+ +++ VAD++GEITAAS+EQ+ GIE+V Sbjct: 457 AKEIKDLIETSIDTVRDGVSKADEVGQHIVEVKQAIRRVADLVGEITAASEEQTRGIEQV 516 Query: 489 NRAITQMDEITQQNAALVEQAAAAAESLQEQADLLAKAVSVFKLSG 534 + A++QMD +TQQNAALVEQAAAA++++ +QA L A S+FKL G Sbjct: 517 DAAVSQMDRVTQQNAALVEQAAAASKAMDDQAGNLRAAASIFKLPG 562 >ref|YP_001058833.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei 668] gb|ABN84493.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei 668] Length = 644 Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust. Identities = 267/556 (48%), Positives = 368/556 (66%), Gaps = 26/556 (4%) Query: 5 FTLKRSFFFFIILAALSLLMFGALQMILRA-QHEIERAGDSRYDSYKLANEVRNNSEHLT 63 F+L+R + L A++ + G Q L A H + +A RY S +LANE+R +S+ LT Sbjct: 81 FSLRRYASLLLGLLAVAAVAIGLCQWRLDAANHRVAQAYQQRYVSTQLANELRRSSDDLT 140 Query: 64 QSVRSYVVTGDPRFETVYWDIVAVSSGKKPR-------------AD-------GRTMPIT 103 + R+YV TGD ++E Y +I+A+ SGK PR AD G T+ + Sbjct: 141 RLARTYVATGDAKWEQQYNEILAIRSGKAPRPLDYDRIYWDFRAADEPLRAEQGETISLQ 200 Query: 104 DLMKQAGFTDQEFARLNEAQSLSTALIKTEEVAMHMVKGEYDDGTGKFTRKDAPDLEKAR 163 ++MK+AGFTD+EFA+L++A+ S L+KTE VAM++VKG D G FT++ PDLEKAR Sbjct: 201 EMMKRAGFTDEEFAKLHDAEQNSNDLVKTETVAMNLVKGLTPDDAGHFTKQGPPDLEKAR 260 Query: 164 KLVHDDVYEKNAASIMRPINEFEKLMDQRTRGELDKARRDGSIAYAVGLAMLGVMLAISV 223 L+ D Y + A IM PI++F KL+D RT G + +A+ + A+ +LA Sbjct: 261 ALMFDANYHRFKAKIMHPIDDFLKLLDARTEGAIARAQASAQTWKIISAAVAIGILAFFA 320 Query: 224 AVLYALYVLIKKQLDKSLAVAERLATGDLTAELEVER-----DDEIGRLMGAINGIGHGL 278 +L+ ++ + L+ + + A R+A GDLT+ + R DEI R+M A+ + GL Sbjct: 321 LMLHMMFKRVLAGLEAAASTASRVAAGDLTSHFDAHRVDPQAKDEISRVMRALQTMNDGL 380 Query: 279 ASVVGNVRTGTETINVASREIATGNADLSNRTESQASSLEETASSMEELTSTVRQNADNA 338 +V +VR+GT+TI AS EI GN DLS RTE QA+SL+ETA+SM ELT+TV+ N +NA Sbjct: 381 VRIVTDVRSGTDTIATASHEIMAGNNDLSARTEQQAASLQETAASMSELTATVKLNLENA 440 Query: 339 RQANSLVTSASELAVKGGKVVGDVVHTMGSIKESSSKIVDIISVIDGIAFQTNILALNAA 398 RQAN + ++A KG V +V T+ +I +S KI DIIS+I+GIAFQTNILALNAA Sbjct: 441 RQANMIGSNAVSTVEKGSVSVEQLVTTVNAISTNSGKIADIISLIEGIAFQTNILALNAA 500 Query: 399 VEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKELISDSVGKVDAGGKLVDEAGATMG 458 VEAARAGEQGRGFAVVASEVRSLAQRS+SAAKEIK+LI S+ V G DE G + Sbjct: 501 VEAARAGEQGRGFAVVASEVRSLAQRSSSAAKEIKDLIETSIDTVRDGVSKADEVGQHIV 560 Query: 459 EIVTSVKHVADIMGEITAASQEQSTGIEEVNRAITQMDEITQQNAALVEQAAAAAESLQE 518 E+ +++ VAD++GEITAAS+EQ+ GIE+V+ A++QMD +TQQNAALVEQAAAA++++ + Sbjct: 561 EVKQAIRRVADLVGEITAASEEQTRGIEQVDAAVSQMDRVTQQNAALVEQAAAASKAMDD 620 Query: 519 QADLLAKAVSVFKLSG 534 QA L A S+FKL G Sbjct: 621 QAGNLRAAASIFKLPG 636