BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0144.p (144 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004754883.1| putative lipoprotein [Collimonas fungivorans... 131 4e-29 ref|YP_003799888.1| hypothetical protein NIDE4302 [Candidatus Ni... 70 1e-10 ref|YP_785002.1| heat shock lipoprotein [Bordetella avium 197N] ... 68 5e-10 ref|NP_879067.1| putative lipoprotein [Bordetella pertussis Toha... 67 1e-09 ref|NP_883087.1| putative lipoprotein [Bordetella parapertussis ... 66 2e-09 >ref|YP_004754883.1| putative lipoprotein [Collimonas fungivorans Ter331] gb|AEK64060.1| putative lipoprotein [Collimonas fungivorans Ter331] Length = 263 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 63/114 (55%), Positives = 78/114 (68%), Gaps = 1/114 (0%) Query: 27 RWELTSWPGHEIPRGGEGSAPVVLSFQDDGVQASVSGRAWCNPFNAPYVLRDGGRLTIGH 86 RWELTSW GH +P G G PV+L+F + + VSGRA CN F+APY +R G+LTI Sbjct: 61 RWELTSWTGHTVPHGDNGE-PVILNFSQENGKGRVSGRAGCNQFSAPYSVRGPGQLTIVE 119 Query: 87 AAATRMACPGKAMAFEAVFLDWLQALERYKITGRTLELFAADGDVMTLQAREKP 140 A TRMACP AM FEA FLD LQA+++YKI G+ LE+ DG ++ AREKP Sbjct: 120 AVTTRMACPEPAMQFEADFLDKLQAVDQYKIAGQQLEMKTLDGQTLSFHAREKP 173 >ref|YP_003799888.1| hypothetical protein NIDE4302 [Candidatus Nitrospira defluvii] emb|CBK43963.1| conserved exported protein of unknown function, putative Heat shock protein HslJ [Candidatus Nitrospira defluvii] Length = 147 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 48/130 (36%), Positives = 64/130 (49%), Gaps = 9/130 (6%) Query: 1 MLAALLGLAGCASQPAGTDGAALTSV-RWELTSWPGHEIPRGGEGSAPVVLSFQDDGVQA 59 M ALL L C + P + RWELT W +P G +G PV+LSF+D Sbjct: 12 MCMALL-LTACVTSPMPEEMRRRAEQNRWELTHWGDRSVPYGDDGE-PVILSFKD----G 65 Query: 60 SVSGRAWCNPFNAPYVL-RDGGRLTIGHAAATRMACPGKAMAFEAVFLDWLQALERYKIT 118 VSG A CN ++A V G L + TRMAC + M FE F+ +A RY++ Sbjct: 66 RVSGHAGCNRYSAAIVFGPRRGELKVSPGITTRMACEPRHMEFETSFIRAFEASTRYRLD 125 Query: 119 GRTLELFAAD 128 G +L F +D Sbjct: 126 GESLS-FESD 134 >ref|YP_785002.1| heat shock lipoprotein [Bordetella avium 197N] emb|CAJ48074.1| putative heat shock lipoprotein [Bordetella avium 197N] Length = 169 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 56/161 (34%), Positives = 78/161 (48%), Gaps = 27/161 (16%) Query: 1 MLAALLGL-AGCAS-----QPAGTDGAA-------LTSVRWELTSWPG-----HEIPRGG 42 + A LL L AGCA+ +P G+ A L RWELT W +I +GG Sbjct: 8 LCAGLLALSAGCATHTGQARPVGSAAANAATSADSLAQTRWELTRWTDALGNQRDITKGG 67 Query: 43 EGSAPVVLSFQDDGVQASVSGRAWCNPFNAPYVLRDGGRLTIGHAAATRMACPGKAMA-F 101 E P+ L+F DG Q +V G + CN ++ Y L + +L+I A+TRMACP A Sbjct: 68 E---PISLTFLADGKQYTVHGFSGCNRYSGSYKL-EADKLSITAPASTRMACPDPQQAQL 123 Query: 102 EAVFLDWLQALERYKITG----RTLELFAADGDVMTLQARE 138 E+ +L L A+ + + R L A GDV+ RE Sbjct: 124 ESDYLRALAAIRSFTLDASGAPRHLTFNVATGDVLEFSRRE 164 >ref|NP_879067.1| putative lipoprotein [Bordetella pertussis Tohama I] emb|CAE40556.1| putative lipoprotein [Bordetella pertussis Tohama I] gb|AEE65671.1| putative lipoprotein [Bordetella pertussis CS] Length = 175 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/168 (33%), Positives = 73/168 (43%), Gaps = 28/168 (16%) Query: 2 LAALLG--LAGCASQPA--------------GTDGAALTSVRWELTSWP----GHEIPRG 41 L A LG LAGCAS D A T+ WEL W G+ + Sbjct: 11 LVAALGAVLAGCASNTGQAQAEGAAAANAATSADSFAQTT--WELVRWTKADGGYRVISH 68 Query: 42 GEGSAPVVLSFQDDGVQASVSGRAWCNPFNAPYVLRDGGRLTIGHAAATRMACPGKAMA- 100 G+ P+ L+F G Q VSG A CN + Y LRD G+L I A+TRMACP A Sbjct: 69 GDNGEPIFLTFFAQGKQYRVSGFAGCNRYTGAYRLRD-GKLQITAPASTRMACPQPERAR 127 Query: 101 FEAVFLDWLQALERYKITG----RTLELFAADGDVMTLQAREKPATSK 144 EA +L L + + + R L GDV+ R+ P T + Sbjct: 128 LEADYLRALAQIRSFTLDSGGAPRHLTFNVQGGDVLDFMRRQDPPTPE 175 >ref|NP_883087.1| putative lipoprotein [Bordetella parapertussis 12822] ref|NP_887386.1| lipoprotein [Bordetella bronchiseptica RB50] emb|CAE40161.1| putative lipoprotein [Bordetella parapertussis] emb|CAE31336.1| putative lipoprotein [Bordetella bronchiseptica RB50] Length = 175 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 57/168 (33%), Positives = 73/168 (43%), Gaps = 28/168 (16%) Query: 2 LAALLG--LAGCASQPA--------------GTDGAALTSVRWELTSWP----GHEIPRG 41 L A LG LAGCAS D A T+ WEL W G+ + Sbjct: 11 LVAALGAVLAGCASNTGQAQAEGAAAANAATSADSFAQTT--WELVRWTKADGGYRVIPH 68 Query: 42 GEGSAPVVLSFQDDGVQASVSGRAWCNPFNAPYVLRDGGRLTIGHAAATRMACPGKAMA- 100 G+ P+ L+F G Q VSG A CN + Y LRD G+L I A+TRMACP A Sbjct: 69 GDNGEPIFLTFFAQGKQYRVSGFAGCNRYTGAYRLRD-GKLQITAPASTRMACPQPERAR 127 Query: 101 FEAVFLDWLQALERYKITG----RTLELFAADGDVMTLQAREKPATSK 144 EA +L L + + + R L GDV+ R+ P T + Sbjct: 128 LEADYLRALAQIRSFTLDSGGAPRHLTFNVQGGDVLDFMRRQDPPTPE 175