BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0136.p (425 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004353773.1| oxidoreductase, FAD-binding protein [Pseudom... 437 e-120 ref|ZP_07776616.1| oxidoreductase [Pseudomonas fluorescens WH6] ... 415 e-114 ref|ZP_06839356.1| oxidoreductase FAD/NAD(P)-binding domain prot... 409 e-112 ref|YP_554378.1| putative oxidoreductase [Burkholderia xenovoran... 408 e-112 ref|YP_001861688.1| pyridoxamine 5'-phosphate oxidase-related FM... 380 e-103 >ref|YP_004353773.1| oxidoreductase, FAD-binding protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA68769.1| Putative oxidoreductase, FAD-binding protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 684 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 212/325 (65%), Positives = 255/325 (78%), Gaps = 4/325 (1%) Query: 1 MQRSVGVVERMAGPGRNQMSRTRMPDQHREFYAQLPFVILGAVDTEGEVWATLRAGRPGF 60 +QRSVG V+ MAG G+ Q++RT MPDQHREFYAQLPFV+LGAVD +G+VWATLRAG+PGF Sbjct: 19 LQRSVGAVDMMAGVGQRQLARTWMPDQHREFYAQLPFVVLGAVDRQGDVWATLRAGQPGF 78 Query: 61 MHADVAKKLTLELVRDPLDPADAGMEDGDGIGMLGIELHTRRRNRMNGLVSRQSGERFHI 120 M++ + L + L +P DPA GM +GD IGMLGIELHTRRRNRMNG+V RQ I Sbjct: 79 MNSPDPQTLRINLEPEPNDPAQEGMGEGDAIGMLGIELHTRRRNRMNGVVRRQLDPGLEI 138 Query: 121 DVTQAYGNCPQYIRLRQYEFTDAPAGPVSKLAALDADAAAMIRAADSFYVASYVVRDGKK 180 V+QAYGNCP+YI LRQY F DA A +L D ++ AADSFY+A+YVVRDG++ Sbjct: 139 SVSQAYGNCPRYINLRQYHFVDAQAVAPRQLTVSDPLVRRLVTAADSFYIATYVVRDGER 198 Query: 181 QVDASHRGGKPGFVRIDDDGVLTIPDFSGNLFFNTLGNFLLNPRAGLVFVDFRNGDLLQL 240 QVDASHRGGKPGFVR+D+DG LTIPDFSGNLFFNTLGN LLNPRAGLVFVDF+ GDLLQ+ Sbjct: 199 QVDASHRGGKPGFVRMDEDGSLTIPDFSGNLFFNTLGNILLNPRAGLVFVDFQTGDLLQM 258 Query: 241 SGRAEVILDAPEVAAFVGAERMWRFTPQQIVRRPAALPLRWIDVAVGADSGASPNALITG 300 SG A+V+LD PE++AF GAER+ RFTPQ+IV RPAA+ LRW D D G SPN+++TG Sbjct: 259 SGSAQVLLDDPEISAFQGAERLLRFTPQRIVYRPAAIALRWKD----QDEGDSPNSMMTG 314 Query: 301 SWEDAAARLKATELSRQWRPFRVGK 325 SWE AA RL+A L +WR +V + Sbjct: 315 SWEQAAERLQAEALRSRWRALQVAR 339 >ref|ZP_07776616.1| oxidoreductase [Pseudomonas fluorescens WH6] gb|EFQ62259.1| oxidoreductase [Pseudomonas fluorescens WH6] Length = 683 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 204/325 (62%), Positives = 242/325 (74%), Gaps = 4/325 (1%) Query: 1 MQRSVGVVERMAGPGRNQMSRTRMPDQHREFYAQLPFVILGAVDTEGEVWATLRAGRPGF 60 +QR+VG V+ MAG G+ QM+R MPDQHREFY QLPFV+LG+VD +G+VWATLR+G+PGF Sbjct: 19 LQRTVGAVDMMAGVGQRQMARDWMPDQHREFYGQLPFVVLGSVDRQGDVWATLRSGQPGF 78 Query: 61 MHADVAKKLTLELVRDPLDPADAGMEDGDGIGMLGIELHTRRRNRMNGLVSRQSGERFHI 120 MH+ L + L P DPA G+ +G IGMLGIELHTRRRNRMNG+V RQ + I Sbjct: 79 MHSPTPHTLRIALAPQPQDPAQEGLGEGRAIGMLGIELHTRRRNRMNGIVRRQLKQGVEI 138 Query: 121 DVTQAYGNCPQYIRLRQYEFTDAPAGPVSKLAALDADAAAMIRAADSFYVASYVVRDGKK 180 +VTQAYGNCP YI LRQY D G +L A D ++ ADSFYVA+YV+RDG+ Sbjct: 139 EVTQAYGNCPLYINLRQYRVVDELPGAAIELPANDPLIRRLVTTADSFYVATYVIRDGQT 198 Query: 181 QVDASHRGGKPGFVRIDDDGVLTIPDFSGNLFFNTLGNFLLNPRAGLVFVDFRNGDLLQL 240 QVDASHRGG GFVR++ DG LTIPDFSGNLFFNTLGN LLNPRAGL FVDF +GDLLQ+ Sbjct: 199 QVDASHRGGLSGFVRMEADGSLTIPDFSGNLFFNTLGNILLNPRAGLTFVDFGSGDLLQM 258 Query: 241 SGRAEVILDAPEVAAFVGAERMWRFTPQQIVRRPAALPLRWIDVAVGADSGASPNALITG 300 SG A+V+LD PE+AAF GAER+WRFTPQ+ V R AAL LRW D A G SP++L+TG Sbjct: 259 SGSAQVLLDDPEIAAFQGAERLWRFTPQRSVYRKAALGLRWEDQA----EGVSPSSLMTG 314 Query: 301 SWEDAAARLKATELSRQWRPFRVGK 325 +W A RLKA LS QWR RV + Sbjct: 315 NWSQTAERLKAQALSAQWRALRVAR 339 >ref|ZP_06839356.1| oxidoreductase FAD/NAD(P)-binding domain protein [Burkholderia sp. Ch1-1] gb|EFG72897.1| oxidoreductase FAD/NAD(P)-binding domain protein [Burkholderia sp. Ch1-1] Length = 691 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 202/335 (60%), Positives = 252/335 (75%), Gaps = 9/335 (2%) Query: 1 MQRSVGVVERMAGPGRNQMSRTRMPDQHREFYAQLPFVILGAVDTEGEVWATLRAGRPGF 60 +QR+VGV ERM GR + R MPDQHR F++QLPFV LGAVD EG+VWATL AG+PGF Sbjct: 20 LQRAVGVAERMQDVGRRVIRRF-MPDQHRTFFSQLPFVALGAVDHEGDVWATLVAGKPGF 78 Query: 61 MHADVAKKLTLELVRDPLDPADAGMEDGDGIGMLGIELHTRRRNRMNGLVSRQSGERFHI 120 +HA A+ L ++LVRDP DPA AG++DG+ +G+LGIELHTRRRNR+NG VS +G F++ Sbjct: 79 LHAPTARTLLVDLVRDPHDPASAGLDDGEAVGLLGIELHTRRRNRLNGTVSHCTGAGFNV 138 Query: 121 DVTQAYGNCPQYIRLRQYEFTDAPAGP----VSKLAALDADAAAMIRAADSFYVASYVVR 176 DVTQ++GNCPQYI++R EF PA P L L A MI AD+F+VASYV Sbjct: 139 DVTQSFGNCPQYIQMRDAEFVRDPASPPPAEAVHLEYLSERARTMIDTADTFFVASYVDD 198 Query: 177 DGKKQVDASHRGGKPGFVRIDDDGVLTIPDFSGNLFFNTLGNFLLNPRAGLVFVDFRNGD 236 +QVD SHRGGK GFVR+ +DGVLTIPDF+GNLFF TLGNF++NPRAGLVF DF +GD Sbjct: 199 PAGRQVDVSHRGGKAGFVRLSEDGVLTIPDFAGNLFFATLGNFVINPRAGLVFADFESGD 258 Query: 237 LLQLSGRAEVILDAPEVAAFVGAERMWRFTPQQIVRRPAALPLRWIDVAVGADSGASPNA 296 LLQL+G A+V LD+PE+AAF GAER+WRF P++IV R ALPLRW A +G SPN+ Sbjct: 259 LLQLTGEAQVDLDSPEIAAFQGAERLWRFKPRRIVYRAGALPLRWKFQA----NGWSPNS 314 Query: 297 LITGSWEDAAARLKATELSRQWRPFRVGKXACRAS 331 L+TGSW++ A+RLKA L+ WRPF+V + +S Sbjct: 315 LMTGSWDEVASRLKAQALADAWRPFKVTQVVDESS 349 >ref|YP_554378.1| putative oxidoreductase [Burkholderia xenovorans LB400] gb|ABE35028.1| putative oxidoreductase [Burkholderia xenovorans LB400] Length = 691 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 201/335 (60%), Positives = 252/335 (75%), Gaps = 9/335 (2%) Query: 1 MQRSVGVVERMAGPGRNQMSRTRMPDQHREFYAQLPFVILGAVDTEGEVWATLRAGRPGF 60 +QR+VGV ERM GR + R MPDQHR F+ QLPFV LGAVD EG+VWATL AG+PGF Sbjct: 20 LQRAVGVAERMQEVGRRVIRRL-MPDQHRAFFPQLPFVALGAVDHEGDVWATLVAGKPGF 78 Query: 61 MHADVAKKLTLELVRDPLDPADAGMEDGDGIGMLGIELHTRRRNRMNGLVSRQSGERFHI 120 +HA A+ L ++LVRDP DPA AG++DG+ +G+LGIELHTRRRNR+NG VS +G F++ Sbjct: 79 LHAPTARTLRVDLVRDPHDPASAGLDDGEAVGLLGIELHTRRRNRLNGTVSHSAGAGFNV 138 Query: 121 DVTQAYGNCPQYIRLRQYEFTDAPAGP----VSKLAALDADAAAMIRAADSFYVASYVVR 176 DVTQ++GNCPQYI++R EF PA P +L L A MI AD+F+VASYV Sbjct: 139 DVTQSFGNCPQYIQMRDAEFVRDPASPPPVEAVQLEHLSERARTMIDTADTFFVASYVDD 198 Query: 177 DGKKQVDASHRGGKPGFVRIDDDGVLTIPDFSGNLFFNTLGNFLLNPRAGLVFVDFRNGD 236 +QVD SHRGGK GFVR+ +DGVLTIPDF+GNLFF TLGNF++NPRAGLVF DF +GD Sbjct: 199 PAGRQVDVSHRGGKAGFVRLSEDGVLTIPDFAGNLFFATLGNFVINPRAGLVFADFESGD 258 Query: 237 LLQLSGRAEVILDAPEVAAFVGAERMWRFTPQQIVRRPAALPLRWIDVAVGADSGASPNA 296 LLQL+G A+V LD+PE+AAF GAER+WRF P++IV R ALPLRW A +G SPN+ Sbjct: 259 LLQLTGEAQVDLDSPEIAAFQGAERLWRFKPRRIVYRAGALPLRWKLQA----NGWSPNS 314 Query: 297 LITGSWEDAAARLKATELSRQWRPFRVGKXACRAS 331 L+TGSW++ A+R+KA L+ WRPF+V + +S Sbjct: 315 LMTGSWDEVASRVKAQALADAWRPFKVTQVVDESS 349 >ref|YP_001861688.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding [Burkholderia phymatum STM815] gb|ACC74642.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding [Burkholderia phymatum STM815] Length = 690 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 192/328 (58%), Positives = 237/328 (72%), Gaps = 11/328 (3%) Query: 1 MQRSVGVVERMAGPGRNQMSRTRMPDQHREFYAQLPFVILGAVDTEGEVWATLRAGRPGF 60 +Q VGVVE+M GR ++ R MP+QHR F+ QLPFV+ G+V +G+VWAT AGRPGF Sbjct: 19 LQEKVGVVEKMREAGR-RVVRDYMPEQHRTFFRQLPFVVAGSVTDDGDVWATFVAGRPGF 77 Query: 61 MHADVAKKLTLELVRDPLDPADAGMEDGDGIGMLGIELHTRRRNRMNGLVSRQSGERFHI 120 MHA K L ++L D DPA +G+ +G IG+LGIELHTRRRNRMNG V ++ + F + Sbjct: 78 MHAPNDKLLHIDLAADLPDPAASGLREGAAIGLLGIELHTRRRNRMNGFVRNRTAQGFDV 137 Query: 121 DVTQAYGNCPQYIRLRQYEFTDAP-----AGPVSKLAALDADAAAMIRAADSFYVASYVV 175 V Q++GNCPQYI+ R YEF P P + A L A MI AAD+F+VASYV Sbjct: 138 AVAQSFGNCPQYIQARDYEFARDPDVVSDIAPTA-FAGLSGRAREMIEAADTFFVASYVG 196 Query: 176 RDGKKQVDASHRGGKPGFVRIDDDGVLTIPDFSGNLFFNTLGNFLLNPRAGLVFVDFRNG 235 +QVD SHRGGK GFVRI DDG LTIPDF+GNLFF TLGNFL+NPRAGLVF DF G Sbjct: 197 DGEHRQVDVSHRGGKAGFVRIGDDGKLTIPDFAGNLFFATLGNFLVNPRAGLVFADFETG 256 Query: 236 DLLQLSGRAEVILDAPEVAAFVGAERMWRFTPQQIVRRPAALPLRWIDVAVGADSGASPN 295 D+LQL+G A V L++PE+AA+ GAER+W FTP +IV R AALPLRW A +G SPN Sbjct: 257 DVLQLTGDATVDLESPEIAAYQGAERLWHFTPTRIVYREAALPLRWTFQA----NGWSPN 312 Query: 296 ALITGSWEDAAARLKATELSRQWRPFRV 323 +L+TGSW++AA+RLKA EL+ WRPF+V Sbjct: 313 SLMTGSWDEAASRLKAAELANAWRPFKV 340