BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0130.p (385 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_02365527.1| amino acid ABC transporter, periplasmic amino... 281 1e-73 ref|YP_004348442.1| extracellular ligand-binding receptor [Burkh... 280 3e-73 ref|YP_004500988.1| extracellular ligand-binding receptor [Serra... 277 2e-72 ref|YP_001454479.1| hypothetical protein CKO_02937 [Citrobacter ... 275 1e-71 ref|YP_004828750.1| Extracellular ligand-binding receptor [Enter... 273 2e-71 >ref|ZP_02365527.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Burkholderia oklahomensis C6786] Length = 431 Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 151/354 (42%), Positives = 212/354 (59%), Gaps = 1/354 (0%) Query: 26 ASEEVQTVTIGFVGALSGVSESFGKSLANAAELAIFEANRKPFKINGKRVQFRLLRMDDR 85 A +TV IG L+G S GK L N A+LA+ +AN + + GK V ++L+ +DD+ Sbjct: 45 AQSAPRTVLIGLAAPLTGPSARIGKDLQNGAQLALDDANSRHPALGGKPVVYKLVAVDDQ 104 Query: 86 NDAERTQRVAQALVKAGVIGVIGGTNSNTSIAASKIFADAGVPQISPTSSLRKYTGQGFR 145 +D VAQ LV+ VIGV+G N+ S+ AS+I+ DAG+ QI+P S+ R+YT QG+ Sbjct: 105 SDPRTAVTVAQQLVERRVIGVVGHWNTGCSVPASRIYRDAGIAQIAPASTGRQYTRQGYA 164 Query: 146 TTFRMLGIDDDACIYLGEYAVKELHAQRIAVIDNGTVFGVNVGTRFSEVAREHGAVIVSR 205 T FR++G DD Y G Y VK LHA+RIAVID+ T FG + +F + +G IV R Sbjct: 165 TAFRIVGHDDAGGAYAGAYVVKTLHAKRIAVIDDRTAFGAGLADQFVKGVEANGGAIVDR 224 Query: 206 DSVSDVLMNFGEILQRVKAQDIDAVFFGGYSAQTSMLAQSMLRLEVKARLVTSMNGIVGS 265 V+D +F +L VKA+ D VFFGG AQ + LA+ M +L++ A LV G V Sbjct: 225 QYVNDKATDFSAVLTAVKARRADVVFFGGLDAQAAPLARRMRQLKLSATLV-GAGGFVTQ 283 Query: 266 SFLISSGVAVNGTVAQEAGIPFNKMPGWKKFEADFNQRFDFQVYSMTPYAYDAAHVLMAA 325 +FL +G +G A E G+P MPG F+A + R+ + P+AYDA L+AA Sbjct: 284 TFLSLAGPDGDGVTALEPGLPLAGMPGGAAFDARYRARYRAPIELHAPFAYDATATLIAA 343 Query: 326 VRRANSLNPRKVTNTLHEISFKGLTGIIAFDAVGNPRSPSYTIYEAQNQKWTAM 379 RANS +P ++ LH + +G+TG IAFDA GN + P++TIY A KWTA+ Sbjct: 344 AERANSTDPARLPAVLHTLKRQGVTGAIAFDAEGNLQDPAFTIYRAGGGKWTAV 397 >ref|YP_004348442.1| extracellular ligand-binding receptor [Burkholderia gladioli BSR3] gb|AEA62930.1| extracellular ligand-binding receptor [Burkholderia gladioli BSR3] Length = 399 Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 145/354 (40%), Positives = 214/354 (60%), Gaps = 1/354 (0%) Query: 24 ALASEEVQTVTIGFVGALSGVSESFGKSLANAAELAIFEANRKPFKINGKRVQFRLLRMD 83 A A++ QTV IG L+G S GK L N A+LA+ +ANR+ I+GK V ++L+ +D Sbjct: 30 AHAADAPQTVLIGLAAPLTGPSARIGKDLQNGAQLALDDANRRHPTIDGKPVVYKLVAVD 89 Query: 84 DRNDAERTQRVAQALVKAGVIGVIGGTNSNTSIAASKIFADAGVPQISPTSSLRKYTGQG 143 D++D VAQ LV+ VIGV+G N+ S+ A++++ DAG+P+I+P S+ +YT QG Sbjct: 90 DQSDPRTAVTVAQDLVEQHVIGVVGHWNTGCSVPAARVYRDAGIPEIAPASTGHQYTQQG 149 Query: 144 FRTTFRMLGIDDDACIYLGEYAVKELHAQRIAVIDNGTVFGVNVGTRFSEVAREHGAVIV 203 + T FR++G DD Y G YAVK LHA+RIAV+D+ T FG + +F + +G IV Sbjct: 150 YATAFRIMGHDDTGGAYTGAYAVKTLHARRIAVLDDRTSFGSGLADQFVKGVEANGGTIV 209 Query: 204 SRDSVSDVLMNFGEILQRVKAQDIDAVFFGGYSAQTSMLAQSMLRLEVKARLVTSMNGIV 263 R V+D +F +L +K++ D VFFGG AQ + +A+ M +L + A L+ + G V Sbjct: 210 DRQYVTDKTTDFSGVLTAIKSKRPDLVFFGGLDAQAAPIARRMHQLGIDATLLGA-GGFV 268 Query: 264 GSSFLISSGVAVNGTVAQEAGIPFNKMPGWKKFEADFNQRFDFQVYSMTPYAYDAAHVLM 323 +FL +G G A E G P KMPG F+A + R+ + P+AYDAA L+ Sbjct: 269 SQTFLSLAGKDGEGVTALEPGRPLAKMPGGPAFDAQYRARYHAPIELHAPFAYDAAATLI 328 Query: 324 AAVRRANSLNPRKVTNTLHEISFKGLTGIIAFDAVGNPRSPSYTIYEAQNQKWT 377 A ++ S +P K+ LH++ +G+TG IAFD GN + P+YTIY Q KW+ Sbjct: 329 AVAEQSKSTDPAKLVAALHKVDRQGVTGRIAFDEQGNLKDPAYTIYRVQGGKWS 382 >ref|YP_004500988.1| extracellular ligand-binding receptor [Serratia sp. AS12] ref|YP_004505941.1| extracellular ligand-binding receptor [Serratia sp. AS9] gb|AEF45680.1| Extracellular ligand-binding receptor [Serratia sp. AS9] gb|AEF50631.1| Extracellular ligand-binding receptor [Serratia sp. AS12] gb|AEG28338.1| Extracellular ligand-binding receptor [Serratia sp. AS13] Length = 387 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 146/353 (41%), Positives = 212/353 (60%), Gaps = 1/353 (0%) Query: 24 ALASEEVQTVTIGFVGALSGVSESFGKSLANAAELAIFEANRKPFKINGKRVQFRLLRMD 83 A+ S+ T+ IG G L+G S GK L N A+LAI +AN + +NGK V F+LL D Sbjct: 23 AVPSQAADTILIGLAGPLTGPSARIGKDLENGAQLAIADANAQKPTLNGKPVTFKLLSED 82 Query: 84 DRNDAERTQRVAQALVKAGVIGVIGGTNSNTSIAASKIFADAGVPQISPTSSLRKYTGQG 143 D++D VAQ LV GV GV+G N+ TSI A++I+ DAG+ Q++P ++ YT QG Sbjct: 83 DQSDPRTAVAVAQRLVDEGVAGVVGHWNTGTSIPAARIYHDAGIAQVAPVATGHAYTQQG 142 Query: 144 FRTTFRMLGIDDDACIYLGEYAVKELHAQRIAVIDNGTVFGVNVGTRFSEVAREHGAVIV 203 F T+FR++G DDD Y GEYAVK L A+RIAVID+ T FG + F + G V Sbjct: 143 FDTSFRVMGHDDDGGNYAGEYAVKVLKAKRIAVIDDRTAFGQGLADEFIKSLAAQGMQPV 202 Query: 204 SRDSVSDVLMNFGEILQRVKAQDIDAVFFGGYSAQTSMLAQSMLRLEVKARLVTSMNGIV 263 +R+ V D ++F +L V++++ D +FFGG +Q + LA+ + +L + +L+ + G V Sbjct: 203 AREYVDDKTVDFSAVLTTVRSKNADLIFFGGVDSQAAPLARRIKQLGMNTQLMGA-GGFV 261 Query: 264 GSSFLISSGVAVNGTVAQEAGIPFNKMPGWKKFEADFNQRFDFQVYSMTPYAYDAAHVLM 323 +FL + G VA E G+P +MPG K FE + R+ + P+AYDA VL+ Sbjct: 262 SQTFLTLAQKEGEGVVALEPGLPLEQMPGGKAFEQAYRDRYKTHIELHAPFAYDATRVLI 321 Query: 324 AAVRRANSLNPRKVTNTLHEISFKGLTGIIAFDAVGNPRSPSYTIYEAQNQKW 376 AA+ +A S NP L I ++G+TG IAFD GN + PS+T+Y+ + KW Sbjct: 322 AAIEQAGSANPADYLPKLRAIHYQGVTGNIAFDPQGNLQQPSFTLYKVVDGKW 374 >ref|YP_001454479.1| hypothetical protein CKO_02937 [Citrobacter koseri ATCC BAA-895] gb|ABV14043.1| hypothetical protein CKO_02937 [Citrobacter koseri ATCC BAA-895] Length = 385 Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 147/367 (40%), Positives = 222/367 (60%), Gaps = 2/367 (0%) Query: 10 LMFCILSLALHASGALASEEVQTVTIGFVGALSGVSESFGKSLANAAELAIFEANRKPFK 69 L IL + ++GA +++ +TV IG G L+G S GK L N A+LAI + N++ Sbjct: 9 LSAAILLSSFASTGAWSAKS-ETVAIGLAGPLTGPSARIGKDLENGAQLAIDDINKQHPT 67 Query: 70 INGKRVQFRLLRMDDRNDAERTQRVAQALVKAGVIGVIGGTNSNTSIAASKIFADAGVPQ 129 I GK V FRL DD++D VAQ LV +GV GV+G N+ TSI A++++ DAG+ Q Sbjct: 68 IGGKAVTFRLQSEDDQSDPRTAVAVAQRLVDSGVAGVVGHWNTGTSIPAARVYHDAGIAQ 127 Query: 130 ISPTSSLRKYTGQGFRTTFRMLGIDDDACIYLGEYAVKELHAQRIAVIDNGTVFGVNVGT 189 ++P ++ YT QGF T+FR++G DDD + G+YAV L A+RIAVID+ T FG + Sbjct: 128 VAPVATGHAYTRQGFDTSFRVMGHDDDGGQFAGQYAVNTLKAKRIAVIDDRTAFGQGLAD 187 Query: 190 RFSEVAREHGAVIVSRDSVSDVLMNFGEILQRVKAQDIDAVFFGGYSAQTSMLAQSMLRL 249 F + G IV R V D ++F +L +++++ D +FFGG +Q + LA+ + +L Sbjct: 188 EFIKSLEAQGVKIVDRQYVDDKTVDFSAVLTAIRSKNADLIFFGGVDSQAAPLARRIKQL 247 Query: 250 EVKARLVTSMNGIVGSSFLISSGVAVNGTVAQEAGIPFNKMPGWKKFEADFNQRFDFQVY 309 + A L+ + G V +FL + G VA E G+P +MPG K FE ++ R+ + Sbjct: 248 GMNATLMGA-GGFVSQTFLQLAQKEGEGVVALEPGLPVEQMPGGKAFEQEYQSRYHTHIE 306 Query: 310 SMTPYAYDAAHVLMAAVRRANSLNPRKVTNTLHEISFKGLTGIIAFDAVGNPRSPSYTIY 369 P+AYDA VL+AA+ +A+S++P + L IS+ G+TG IAFD GN +SPS+T+Y Sbjct: 307 LHAPFAYDATRVLVAAMEKADSVDPAEYLPVLRAISYSGVTGQIAFDNEGNLKSPSFTVY 366 Query: 370 EAQNQKW 376 + + KW Sbjct: 367 KVVDGKW 373 >ref|YP_004828750.1| Extracellular ligand-binding receptor [Enterobacter asburiae LF7a] gb|AEN64965.1| Extracellular ligand-binding receptor [Enterobacter asburiae LF7a] Length = 385 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 146/367 (39%), Positives = 221/367 (60%), Gaps = 2/367 (0%) Query: 10 LMFCILSLALHASGALASEEVQTVTIGFVGALSGVSESFGKSLANAAELAIFEANRKPFK 69 L IL ++GA A++ +TV IG G L+G S GK L N A+LAI + N++ Sbjct: 9 LSAAILLSGFASTGAWAADS-ETVVIGLAGPLTGPSARIGKDLENGAQLAIDDINKQHPT 67 Query: 70 INGKRVQFRLLRMDDRNDAERTQRVAQALVKAGVIGVIGGTNSNTSIAASKIFADAGVPQ 129 I GK V F+L DD++D VAQ LV +GV GV+G N+ TSI A++++ DAG+ Q Sbjct: 68 IGGKAVTFKLQSEDDQSDPRTAVAVAQRLVDSGVAGVVGHWNTGTSIPAARVYHDAGIAQ 127 Query: 130 ISPTSSLRKYTGQGFRTTFRMLGIDDDACIYLGEYAVKELHAQRIAVIDNGTVFGVNVGT 189 ++P ++ YT QGF T+FR++G DDD + G+YAV L A+RIAVID+ T FG + Sbjct: 128 VAPVATGHAYTKQGFDTSFRVMGHDDDGGQFAGQYAVNTLKAKRIAVIDDRTAFGQGLAD 187 Query: 190 RFSEVAREHGAVIVSRDSVSDVLMNFGEILQRVKAQDIDAVFFGGYSAQTSMLAQSMLRL 249 F + G IV R V D ++F +L +++++ D +FFGG +Q + LA+ + +L Sbjct: 188 EFIKSLEAQGVKIVDRQYVDDKTVDFSAVLTAIRSKNADLIFFGGVDSQAAPLARRIKQL 247 Query: 250 EVKARLVTSMNGIVGSSFLISSGVAVNGTVAQEAGIPFNKMPGWKKFEADFNQRFDFQVY 309 + A L+ + G V +FL + G VA E G+P ++MPG K FE + R+ + Sbjct: 248 GMNATLMGA-GGFVSQTFLQLAQKEGEGVVALEPGLPVDQMPGGKAFEQAYQSRYHTHIE 306 Query: 310 SMTPYAYDAAHVLMAAVRRANSLNPRKVTNTLHEISFKGLTGIIAFDAVGNPRSPSYTIY 369 P+AYDA VL+AA+ +ANS++P + L I++ G+TG IAFD GN ++PS+T+Y Sbjct: 307 LHAPFAYDATRVLVAAMEKANSVDPSEYLPALRAINYSGVTGQIAFDNEGNLKAPSFTVY 366 Query: 370 EAQNQKW 376 + + KW Sbjct: 367 KVVDGKW 373