BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0120.p (327 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772442.1| ABC transporter substrate-binding protein [Brad... 393 e-107 ref|ZP_05039136.1| NMT1/THI5 like family [Synechococcus sp. PCC ... 392 e-107 ref|YP_485104.1| ABC transporter substrate-binding protein [Rhod... 382 e-104 gb|ACX33936.1| hypothetical NMT1/THI5 like family protein [uncul... 358 9e-97 ref|YP_002137274.1| ABC transporter substrate-binding protein [G... 174 2e-41 >ref|NP_772442.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC51067.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 378 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 186/314 (59%), Positives = 239/314 (76%), Gaps = 2/314 (0%) Query: 13 AAILLAISSGFTHAAD--KIRLAQNLAPISGLAIIAKQKNLFEKYGLDVAVNNFTSGRQA 70 A +AI G AA+ K RLAQNL PISGLAI+AK K +FEK GLD+ V+NFTSG+Q Sbjct: 62 ALCCVAIGPGCASAAELLKARLAQNLGPISGLAIVAKSKGIFEKNGLDITVSNFTSGKQC 121 Query: 71 LETVLGGGADIATTAEAPITAAALARQKIALLARMEYSDDKTLVNKSAGINSTADLKGKR 130 L+TV+GGGADIATTAEAP+TA+A+A Q IA +A MEYSD KT+V AG+ + DL+GKR Sbjct: 122 LDTVIGGGADIATTAEAPVTASAMANQPIAFVAGMEYSDLKTVVAAKAGVKTKPDLRGKR 181 Query: 131 IGYTVGTGGEIYTLTLLRKAGLTRNDVTLVNLRPQDMVAALSTNSIDAYNTWEPHISNGK 190 IG+T GTG E+YT TLL+ AGLT DVTLVNLRPQ+M+ AL+ SIDA +TWEPHI+N K Sbjct: 182 IGFTAGTGSEVYTATLLKSAGLTPKDVTLVNLRPQEMLPALAAGSIDAIDTWEPHIANAK 241 Query: 191 KALGDKVRELDTKGVYAETFNLVVTEEYLSKNEKTVTAFLRAILDAERFLKANRDESITI 250 KALG+ V ELDT G Y+ETFN+VV YL N V F+ A++DAE ++KA++DE+IT+ Sbjct: 242 KALGEAVAELDTTGTYSETFNIVVMRTYLDANPAVVEKFIAALIDAEVWVKAHQDEAITV 301 Query: 251 IAAATGMKKEELAEIWNDYIFELVLDERVLSTLKNHAEWRLESGNAPTGATLPDFHKFIF 310 +A A GMK+++LA IW DY++ + LD+R++ LK H+ WRL+SGN P GA +PDF K + Sbjct: 302 VADAVGMKRDDLAPIWADYVYRVRLDDRLIEILKTHSAWRLDSGNHPPGAAMPDFSKVVV 361 Query: 311 AAPLKQVAPERVKI 324 A PLK+V P RV + Sbjct: 362 AEPLKKVDPARVTL 375 >ref|ZP_05039136.1| NMT1/THI5 like family [Synechococcus sp. PCC 7335] gb|EDX87871.1| NMT1/THI5 like family [Synechococcus sp. PCC 7335] Length = 356 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 191/299 (63%), Positives = 246/299 (82%), Gaps = 1/299 (0%) Query: 30 IRLAQNLAPISGLAIIAKQKNLFEKYGLDVAVNNFTSGRQALETVLGGGADIATTAEAPI 89 +RLAQNL+PISG+AI+AK++ F+K GLDV V+NFTSG+Q LETV+GG ADIATTAEAP Sbjct: 58 LRLAQNLSPISGVAIVAKEQGFFDKRGLDVEVSNFTSGKQCLETVMGGAADIATTAEAPT 117 Query: 90 TAAALARQKIALLARMEYSDDKTLVNKSAGINSTADLKGKRIGYTVGTGGEIYTLTLLRK 149 TAA +A+Q IA LARMEYSD KTL + SA +++ ADLKGKRIG+T GTGGE+YT+ LL++ Sbjct: 118 TAATMAQQPIAFLARMEYSDLKTLTDASADVSTLADLKGKRIGFTAGTGGEVYTMALLKE 177 Query: 150 AGLTRNDVTLVNLRPQDMVAALSTNSIDAYNTWEPHISNGKKALGDKVRELDTKGVYAET 209 AG++ +DVTL+NLRPQ+M+AAL++ SIDAYNTWEPHISNG+K LGDKV +LDT G+Y+ET Sbjct: 178 AGVSPDDVTLMNLRPQEMLAALTSGSIDAYNTWEPHISNGQKTLGDKVTQLDTAGIYSET 237 Query: 210 FNLVVTEEYLSKNEKTVTAFLRAILDAERFLKANRDESITIIAAATGMKKEELAEIWNDY 269 FN+V T +YL N F++A++DAE ++KANR+++IT++A A MK+E+LA IW+DY Sbjct: 238 FNIVTTTDYLDDNPVVAEKFMQALIDAEEWMKANREDAITVVADAVDMKREDLAPIWDDY 297 Query: 270 IFELVLDERVLSTLKNHAEWRLESGNAPTGAT-LPDFHKFIFAAPLKQVAPERVKIPGL 327 I+E+VLD++VL L HA WRLESGN P G T +PDF I+ PLK VAPERVKI GL Sbjct: 298 IYEVVLDQKVLDILDTHAAWRLESGNHPDGVTDMPDFKSIIYPEPLKAVAPERVKITGL 356 >ref|YP_485104.1| ABC transporter substrate-binding protein [Rhodopseudomonas palustris HaA2] gb|ABD06193.1| ABC transporter substrate-binding protein [Rhodopseudomonas palustris HaA2] Length = 330 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 180/294 (61%), Positives = 230/294 (78%) Query: 29 KIRLAQNLAPISGLAIIAKQKNLFEKYGLDVAVNNFTSGRQALETVLGGGADIATTAEAP 88 K RLAQNL PISG+ I+AK+K FEK+GLD++V+NFTSG+Q L+TV+GGGADIATTAEAP Sbjct: 30 KARLAQNLGPISGIVIVAKEKGFFEKHGLDISVSNFTSGKQCLDTVVGGGADIATTAEAP 89 Query: 89 ITAAALARQKIALLARMEYSDDKTLVNKSAGINSTADLKGKRIGYTVGTGGEIYTLTLLR 148 +TAAA+A Q IA LARMEYSD KT+V AGI A LKGK+I +T GTG E+YTL LL+ Sbjct: 90 VTAAAMAGQPIAFLARMEYSDLKTVVATKAGIKDKAGLKGKKIAFTAGTGSEVYTLALLK 149 Query: 149 KAGLTRNDVTLVNLRPQDMVAALSTNSIDAYNTWEPHISNGKKALGDKVRELDTKGVYAE 208 AGL ++DVTLVNLRPQ+M+ AL + SIDA++TWEPHI+N KK LG V ELDTKG+Y+E Sbjct: 150 AAGLKKDDVTLVNLRPQEMLPALLSGSIDAFDTWEPHIANAKKTLGADVAELDTKGIYSE 209 Query: 209 TFNLVVTEEYLSKNEKTVTAFLRAILDAERFLKANRDESITIIAAATGMKKEELAEIWND 268 TFN+VV +YL KN + F+ A++ AE ++KAN +++IT +A A +K+E+LA IWND Sbjct: 210 TFNIVVMRDYLEKNGPLMEKFMAAMIAAETWMKANPEDAITTVAKAVAIKREDLAPIWND 269 Query: 269 YIFELVLDERVLSTLKNHAEWRLESGNAPTGATLPDFHKFIFAAPLKQVAPERV 322 Y++++ LD+R L LK HA WRLESGN P GAT+PDF K A LK++ P RV Sbjct: 270 YVYQVRLDDRQLDVLKTHAAWRLESGNHPPGATMPDFTKVFAPAILKKLDPSRV 323 >gb|ACX33936.1| hypothetical NMT1/THI5 like family protein [uncultured prokaryote AT5] Length = 318 Score = 358 bits (918), Expect = 9e-97, Method: Compositional matrix adjust. Identities = 180/301 (59%), Positives = 232/301 (77%) Query: 24 THAADKIRLAQNLAPISGLAIIAKQKNLFEKYGLDVAVNNFTSGRQALETVLGGGADIAT 83 + A +K+RLAQN +PISG++IIA +K F K GL+V V NFT+G+Q L+TV+GGGADIAT Sbjct: 16 SQAVEKVRLAQNQSPISGVSIIADRKGFFAKNGLEVEVFNFTTGKQCLDTVMGGGADIAT 75 Query: 84 TAEAPITAAALARQKIALLARMEYSDDKTLVNKSAGINSTADLKGKRIGYTVGTGGEIYT 143 TAEAP TAAA++ QKIA LAR EYS KTL +A I+ ADLKGKRI +T GTGGE+YT Sbjct: 76 TAEAPTTAAAMSGQKIAFLARTEYSYIKTLTATAAEIHKPADLKGKRIAFTAGTGGEVYT 135 Query: 144 LTLLRKAGLTRNDVTLVNLRPQDMVAALSTNSIDAYNTWEPHISNGKKALGDKVRELDTK 203 + LL+ AGL ++DVTLVNLRPQDMVAAL++ SIDAY TWEPHI NG KALG KV LDTK Sbjct: 136 VQLLKAAGLGKDDVTLVNLRPQDMVAALASGSIDAYGTWEPHIFNGIKALGSKVTPLDTK 195 Query: 204 GVYAETFNLVVTEEYLSKNEKTVTAFLRAILDAERFLKANRDESITIIAAATGMKKEELA 263 G+YAETFN+V+T++YL K + FLRA+++AE ++KANR+++I ++A M +EL Sbjct: 196 GIYAETFNIVLTQDYLQKKPEVAKNFLRALVEAEVWMKANREQAINVVAEFVKMPVDELK 255 Query: 264 EIWNDYIFELVLDERVLSTLKNHAEWRLESGNAPTGATLPDFHKFIFAAPLKQVAPERVK 323 IW+DY++E+ LD++ L L HA WRL SGN P GA +PD+ +F+ PLK VAPE+V Sbjct: 256 PIWDDYVYEVALDDKTLDILNAHASWRLASGNHPPGAVMPDWRTVVFSGPLKSVAPEKVL 315 Query: 324 I 324 I Sbjct: 316 I 316 >ref|YP_002137274.1| ABC transporter substrate-binding protein [Geobacter bemidjiensis Bem] gb|ACH37478.1| ABC transporter, periplasmic solute-binding lipoprotein, NMT1/THI5-like domain protein [Geobacter bemidjiensis Bem] Length = 327 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 106/296 (35%), Positives = 159/296 (53%), Gaps = 4/296 (1%) Query: 30 IRLAQNLAPISGLAIIAKQKNLFEKYGLDVAVNNFTSGRQALETVLGGGADIATTAEAPI 89 +RLA + P L IA K F + G+ + + F GRQAL V+ G AD+AT AE P Sbjct: 31 LRLAYTMQPDCALVHIAMAKGYFLEEGVLLQPSLFGFGRQALAAVIEGKADLATVAETPF 90 Query: 90 TAAALARQKIALLARMEYS-DDKTLVNKSAGINSTADLKGKRIGYTVGTGGEIYTLTLLR 148 AAL ++I+L+A + S + +V + G+ S +L+GKRI YT GT E++ T L Sbjct: 91 VFAALNGKRISLVASIFTSWQNNGVVAR--GLTSPPELRGKRIAYTPGTTSEMFLDTFLM 148 Query: 149 KAGLTRNDVTLVNLRPQDMVAALSTNSIDAYNTWEPHISNGKKALGDKVRELDTKGVYAE 208 + R++VTLV L PQ M AAL+ +DA +TW P + LG R +Y E Sbjct: 149 AQRIERSEVTLVGLSPQQMPAALAAGEVDAASTWNPAMKEAATGLGAAGRIFYDPYLYTE 208 Query: 209 TFNLVVTEEYLSKNEKTVTAFLRAILDAERFLKANRDESITIIAAATGMKKEELAEIWND 268 T+ L Y++ N+ V LRA+L AE F + E+ T++AA + E L E WN Sbjct: 209 TYVLAGNRSYVTANQDLVQRVLRALLKAEAFASLHPAEARTLVAATLKLSPELLGEFWNA 268 Query: 269 YIFELVLDERVLSTLKNHAEWRLESGNAPTGATLPDFHKFIFAAPLKQVAPERVKI 324 F + L+ ++ L+ + W L P A +P++ ++I PL++V PE +KI Sbjct: 269 SRFRVSLEHSLILLLEEESRWALRRKPVPEAA-MPNYLEYIDVRPLQEVKPEAIKI 323