BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0108.p (326 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004753318.1| HEAT repeat protein [Collimonas fungivorans ... 471 e-130 ref|YP_348887.1| phycobiliprotein [Pseudomonas fluorescens Pf0-1... 286 3e-75 ref|YP_001982722.1| HEAT repeat protein [Cellvibrio japonicus Ue... 282 5e-74 dbj|BAK90153.1| putative phycobiliprotein [Pseudomonas aeruginos... 280 3e-73 ref|YP_790943.1| putative phycobiliprotein [Pseudomonas aerugino... 279 4e-73 >ref|YP_004753318.1| HEAT repeat protein [Collimonas fungivorans Ter331] gb|AEK62495.1| HEAT repeat protein [Collimonas fungivorans Ter331] Length = 323 Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust. Identities = 249/317 (78%), Positives = 273/317 (86%) Query: 7 INTSFNPDDGIGQFRARLRDPDSAVRRIAILDLIDVAGDEHAPLLVEALGDPSPEVRLEA 66 +N + I QFR RLRD DSAVRRIA+LDLIDVAGDEHA LLVE L D + +VRLEA Sbjct: 4 VNHHYQESHEIRQFRERLRDADSAVRRIAVLDLIDVAGDEHASLLVETLKDAAADVRLEA 63 Query: 67 ARALEAFESDDSVAGLIVLLTDEDTEVREAAAHALSELKDPASAELLLPHAQDERPFVRV 126 ARALEAFES SV GLI LLTD+D++VREAAAH LSELKDPASA +LLPHA DER FVRV Sbjct: 64 ARALEAFESRASVIGLIGLLTDDDSKVREAAAHTLSELKDPASAAILLPHASDERSFVRV 123 Query: 127 AILRALRELRVPDSLEPALTALDHADASVRREAISVLGYLKQVRALAPIMQLAANDSDPE 186 A+LRALRELR P+SLEPAL+AL HADA+VRREAISVLGYLKQ+RALAPIMQLA +D DPE Sbjct: 124 AVLRALRELRAPESLEPALSALMHADAAVRREAISVLGYLKQIRALAPIMQLATSDPDPE 183 Query: 187 VRRAATGALGFCTDESVLPALLSALRDAAWQVREEAATTLGKLRLAAATAELITALEDAY 246 VRRAA+GALGF D+SVLPALL+ L DAAWQVREEAATTLGKLRLAAA ELI ALED Y Sbjct: 184 VRRAASGALGFAIDDSVLPALLTTLHDAAWQVREEAATTLGKLRLAAAADELIKALEDPY 243 Query: 247 WQVRLRATRSLGRLRSKEAIAPLLATLRHEISNLRKEAALALGEIRDASALPALLEAEQD 306 WQVRLRA RSLGRLRS A+ PLL TL+HEISNLRKEAAL+LGEIR +ALP+LL AEQD Sbjct: 244 WQVRLRAARSLGRLRSTAAVIPLLQTLQHEISNLRKEAALSLGEIRHTAALPSLLAAEQD 303 Query: 307 GDPEVRKAVRLALEQIR 323 DPEVRKAVRLA+EQIR Sbjct: 304 PDPEVRKAVRLAIEQIR 320 >ref|YP_348887.1| phycobiliprotein [Pseudomonas fluorescens Pf0-1] gb|ABA74896.1| PBS lyase HEAT-like repeat protein [Pseudomonas fluorescens Pf0-1] Length = 320 Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 177/319 (55%), Positives = 215/319 (67%), Gaps = 4/319 (1%) Query: 9 TSF---NPDDGIGQFRARLRDPDSAVRRIAILDLIDVAGDEHAPLLVEALG-DPSPEVRL 64 TSF +D I + RL D+ VRRIA++DL D+ + LVE L DP+ EVR Sbjct: 2 TSFFALTDNDDILALQPRLTADDAGVRRIALIDLADLEEPDGLLWLVERLAEDPAEEVRA 61 Query: 65 EAARALEAFESDDSVAGLIVLLTDEDTEVREAAAHALSELKDPASAELLLPHAQDERPFV 124 EAAR LEA+E + V L LTD V+ AAA +LS LK A+ ++LP V Sbjct: 62 EAARLLEAWEDEPVVEALCQALTDPSPAVQAAAAQSLSLLKTEAAGRVILPWTAHAETGV 121 Query: 125 RVAILRALRELRVPDSLEPALTALDHADASVRREAISVLGYLKQVRALAPIMQLAANDSD 184 R+A RALRELR P + A+ AL+ ADASVRREA+ VLG+LKQ+ AL + +LA++D D Sbjct: 122 RIAAFRALRELRFPGAAPAAIQALNDADASVRREAVGVLGWLKQLDALPALARLASDDPD 181 Query: 185 PEVRRAATGALGFCTDESVLPALLSALRDAAWQVREEAATTLGKLRLAAATAELITALED 244 EVRRAATGALG +D VLPAL AL+D AWQVREEAATTLGK+ A LI AL D Sbjct: 182 TEVRRAATGALGLASDADVLPALRQALQDQAWQVREEAATTLGKVGHTDAGPALIEALAD 241 Query: 245 AYWQVRLRATRSLGRLRSKEAIAPLLATLRHEISNLRKEAALALGEIRDASALPALLEAE 304 YWQVRLRATRSLGRL+ A+ L+ TL H ISNLRKEAALALGE+ D A+ AL A+ Sbjct: 242 DYWQVRLRATRSLGRLKYVAALDALIDTLGHRISNLRKEAALALGELNDRGAVAALQAAQ 301 Query: 305 QDGDPEVRKAVRLALEQIR 323 DGDPEVRKAVR+AL Q++ Sbjct: 302 DDGDPEVRKAVRIALSQLQ 320 >ref|YP_001982722.1| HEAT repeat protein [Cellvibrio japonicus Ueda107] gb|ACE84126.1| HEAT repeat protein [Cellvibrio japonicus Ueda107] Length = 319 Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 163/317 (51%), Positives = 214/317 (67%), Gaps = 1/317 (0%) Query: 11 FNPDDGIGQFRARLRDPDSAVRRIAILDLIDVAGDEHAPLLVEALG-DPSPEVRLEAARA 69 F + I + RL D+ VRRIA+++L D+ + P LV AL D P+VR EAAR Sbjct: 2 FTDNSAILDLQPRLEHDDAGVRRIALIELADLEDPDALPWLVNALRLDKDPQVRSEAARL 61 Query: 70 LEAFESDDSVAGLIVLLTDEDTEVREAAAHALSELKDPASAELLLPHAQDERPFVRVAIL 129 LEA+E D V L LTD + V + AA +LS+LK+P S ++LP + VR + L Sbjct: 62 LEAWEEPDVVEALCHALTDAEAMVNQTAAQSLSQLKNPDSGRIILPWVKHPNTNVRHSAL 121 Query: 130 RALRELRVPDSLEPALTALDHADASVRREAISVLGYLKQVRALAPIMQLAANDSDPEVRR 189 RALRE+R+P+S AL +L+ +DA +RREA+ VLG+LK AL + QLA+ D++ +VRR Sbjct: 122 RALREIRLPESAVVALESLNDSDAGIRREAVGVLGWLKYQPALPQLAQLASGDNNADVRR 181 Query: 190 AATGALGFCTDESVLPALLSALRDAAWQVREEAATTLGKLRLAAATAELITALEDAYWQV 249 AA GALGF D SVL +L AL D+ W+VREE+A+TLGKLR + LI AL D YWQV Sbjct: 182 AAVGALGFAEDASVLSSLNQALADSDWRVREESASTLGKLRHHDSGGILIQALHDDYWQV 241 Query: 250 RLRATRSLGRLRSKEAIAPLLATLRHEISNLRKEAALALGEIRDASALPALLEAEQDGDP 309 RL+A R+LG+LR +A+A L+ TL H ISNLRKEAAL+LGE+ +A AL AL EQD DP Sbjct: 242 RLQAARALGKLRFGQALAALIDTLGHSISNLRKEAALSLGELGNAQALSALQHTEQDADP 301 Query: 310 EVRKAVRLALEQIRLAV 326 EVRKA R+A++QI A Sbjct: 302 EVRKAARIAIQQITQAT 318 >dbj|BAK90153.1| putative phycobiliprotein [Pseudomonas aeruginosa NCGM2.S1] Length = 321 Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 177/309 (57%), Positives = 213/309 (68%), Gaps = 1/309 (0%) Query: 17 IGQFRARLRDPDSAVRRIAILDLIDVAGDEHAPLLVEAL-GDPSPEVRLEAARALEAFES 75 I + RL D D VRR+A+++L D+ E PLLV AL GDP P VR EAAR LEA+E Sbjct: 11 ILELSPRLEDADPGVRRLALIELADLELPEALPLLVAALRGDPDPGVRGEAARLLEAWEE 70 Query: 76 DDSVAGLIVLLTDEDTEVREAAAHALSELKDPASAELLLPHAQDERPFVRVAILRALREL 135 D V L L D V EAAA +L ELK+PA+ LLP + FVR ++LRALREL Sbjct: 71 DAVVDALCAALADPLPAVAEAAAQSLGELKEPAAGRRLLPWLEHADSFVRASVLRALREL 130 Query: 136 RVPDSLEPALTALDHADASVRREAISVLGYLKQVRALAPIMQLAANDSDPEVRRAATGAL 195 R+ +S PAL AL A+VRREA++VLG+L+ ALA + +LA+ D+DPEVRRAATGAL Sbjct: 131 RLEESAAPALAALGDPQAAVRREAVAVLGWLRHQPALAELARLASADADPEVRRAATGAL 190 Query: 196 GFCTDESVLPALLSALRDAAWQVREEAATTLGKLRLAAATAELITALEDAYWQVRLRATR 255 G + +VLPAL +AL DA WQVREEAATTLGKL A L+ AL D YWQVRLRA R Sbjct: 191 GLSREAAVLPALCAALEDAQWQVREEAATTLGKLGREEAGEPLLKALADDYWQVRLRAAR 250 Query: 256 SLGRLRSKEAIAPLLATLRHEISNLRKEAALALGEIRDASALPALLEAEQDGDPEVRKAV 315 +LGRLR + A L A L H I NLRKEAALALGE+ D ++ AL AE DGDPEVRKAV Sbjct: 251 ALGRLRHRPAREALEALLGHPIGNLRKEAALALGELADPASAQALRVAEGDGDPEVRKAV 310 Query: 316 RLALEQIRL 324 R+AL Q+R+ Sbjct: 311 RIALAQLRV 319 >ref|YP_790943.1| putative phycobiliprotein [Pseudomonas aeruginosa UCBPP-PA14] gb|ABJ11476.1| putative phycobiliprotein [Pseudomonas aeruginosa UCBPP-PA14] Length = 321 Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 178/309 (57%), Positives = 212/309 (68%), Gaps = 1/309 (0%) Query: 17 IGQFRARLRDPDSAVRRIAILDLIDVAGDEHAPLLVEAL-GDPSPEVRLEAARALEAFES 75 I + RL D D VRR+A+++L D+ E PLLV AL GDP P VR EAAR LEA+E Sbjct: 11 ILELSPRLEDADPGVRRLALIELADLELPEALPLLVAALRGDPDPGVRGEAARLLEAWEE 70 Query: 76 DDSVAGLIVLLTDEDTEVREAAAHALSELKDPASAELLLPHAQDERPFVRVAILRALREL 135 D V L L D V EAAA +L ELK+PA+ LLP + FVR ++LRALREL Sbjct: 71 DAVVDALCAALADPLPAVAEAAAQSLGELKEPAAGRRLLPWLEHADAFVRASVLRALREL 130 Query: 136 RVPDSLEPALTALDHADASVRREAISVLGYLKQVRALAPIMQLAANDSDPEVRRAATGAL 195 R+ +S PAL AL A+VRREA++VLG+L+ ALA + +LA+ D DPEVRRAATGAL Sbjct: 131 RLEESAAPALAALGDPQAAVRREAVAVLGWLRHQPALAELARLASADVDPEVRRAATGAL 190 Query: 196 GFCTDESVLPALLSALRDAAWQVREEAATTLGKLRLAAATAELITALEDAYWQVRLRATR 255 G + +VLPAL +AL DA WQVREEAATTLGKL A L+ AL D YWQVRLRA R Sbjct: 191 GLSREVTVLPALCAALADAQWQVREEAATTLGKLGREEAGEPLLKALADDYWQVRLRAAR 250 Query: 256 SLGRLRSKEAIAPLLATLRHEISNLRKEAALALGEIRDASALPALLEAEQDGDPEVRKAV 315 SLGRLR + A L A L H I NLRKEAALALGE+ D ++ AL AE DGDPEVRKAV Sbjct: 251 SLGRLRHRPAREALEALLGHPIGNLRKEAALALGELADPASAQALRVAEGDGDPEVRKAV 310 Query: 316 RLALEQIRL 324 R+AL Q+R+ Sbjct: 311 RIALGQLRV 319