BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0103.p         (85 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_02371881.1| drug resistance transporter, EmrB/QacA subfam...    67   7e-10
ref|ZP_05589265.1| EmrB/QacA family drug resistance transporter ...    67   7e-10
ref|YP_440367.1| EmrB/QacA family drug resistance transporter [B...    67   8e-10
ref|YP_260703.1| EmrB/QacA family drug resistance transporter [P...    65   5e-09
ref|YP_003607512.1| major facilitator superfamily MFS_1 [Burkhol...    64   6e-09

>ref|ZP_02371881.1| drug resistance transporter, EmrB/QacA subfamily, putative
          [Burkholderia thailandensis TXDOH]
          Length = 517

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 34/65 (52%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 21 RRRKERNVLLICSGVCALIVLDTNIVAVSLPSVARSLHADFSDIEWIGRRPIATTGTXCC 80
           R   R+ L   S VC+LIVLDTN+VAVSLPS+AR+ HA F+DIEW+      T    C 
Sbjct: 36 HRSAARHALATASAVCSLIVLDTNVVAVSLPSIARTFHASFADIEWV-VSAYMTAFAACL 94

Query: 81 APAAG 85
           PA G
Sbjct: 95 LPAGG 99


>ref|ZP_05589265.1| EmrB/QacA family drug resistance transporter [Burkholderia
          thailandensis E264]
          Length = 551

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 34/65 (52%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 21 RRRKERNVLLICSGVCALIVLDTNIVAVSLPSVARSLHADFSDIEWIGRRPIATTGTXCC 80
           R   R+ L   S VC+LIVLDTN+VAVSLPS+AR+ HA F+DIEW+      T    C 
Sbjct: 36 HRSAARHALATASAVCSLIVLDTNVVAVSLPSIARTFHASFADIEWV-VSAYMTAFAACL 94

Query: 81 APAAG 85
           PA G
Sbjct: 95 LPAGG 99


>ref|YP_440367.1| EmrB/QacA family drug resistance transporter [Burkholderia
           thailandensis E264]
 gb|ABC35162.1| drug resistance transporter, EmrB/QacA subfamily, putative
           [Burkholderia thailandensis E264]
          Length = 587

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 34/65 (52%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 21  RRRKERNVLLICSGVCALIVLDTNIVAVSLPSVARSLHADFSDIEWIGRRPIATTGTXCC 80
            R   R+ L   S VC+LIVLDTN+VAVSLPS+AR+ HA F+DIEW+      T    C 
Sbjct: 72  HRSAARHALATASAVCSLIVLDTNVVAVSLPSIARTFHASFADIEWV-VSAYMTAFAACL 130

Query: 81  APAAG 85
            PA G
Sbjct: 131 LPAGG 135


>ref|YP_260703.1| EmrB/QacA family drug resistance transporter [Pseudomonas
          fluorescens Pf-5]
 gb|AAY92867.1| drug resistance transporter, EmrB/QacA family [Pseudomonas
          fluorescens Pf-5]
          Length = 513

 Score = 64.7 bits (156), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 31/47 (65%), Positives = 37/47 (78%)

Query: 21 RRRKERNVLLICSGVCALIVLDTNIVAVSLPSVARSLHADFSDIEWI 67
          R    R  LL  SGVC+LIVLDTNIVAV+LPS+AR L A+F+DIEW+
Sbjct: 3  RSVNPRLTLLTASGVCSLIVLDTNIVAVALPSIARDLGANFADIEWV 49


>ref|YP_003607512.1| major facilitator superfamily MFS_1 [Burkholderia sp. CCGE1002]
 gb|ADG18001.1| major facilitator superfamily MFS_1 [Burkholderia sp. CCGE1002]
          Length = 525

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 28/40 (70%), Positives = 34/40 (85%)

Query: 28 VLLICSGVCALIVLDTNIVAVSLPSVARSLHADFSDIEWI 67
          VL I S  C+LIVLDTN+VAVSLPS+ARS HA F+D+EW+
Sbjct: 22 VLAIASATCSLIVLDTNVVAVSLPSIARSFHASFADVEWV 61