BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0091.p         (124 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_995613.1| oligopeptide/dipeptide ABC transporter ATPase [...   191   3e-47
ref|YP_003774987.1| dipeptide/oligopeptide/nickel ABC transporte...   171   5e-41
ref|YP_003979791.1| oligopeptide transport ATP-binding protein O...   166   2e-39
ref|ZP_06688336.1| oligopeptide ABC superfamily ATP binding cass...   164   5e-39
gb|EFV84688.1| oligopeptide/dipeptide ABC transporter [Achromoba...   162   2e-38

>ref|YP_995613.1| oligopeptide/dipeptide ABC transporter ATPase [Verminephrobacter
           eiseniae EF01-2]
 gb|ABM56595.1| oligopeptide/dipeptide ABC transporter, ATPase subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 339

 Score =  191 bits (485), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 94/105 (89%), Positives = 101/105 (96%)

Query: 4   MSATHSVPTLEVRNLRTHFYMPSGVLPAVDDVSLTLERGRILGLVGESGSGKTVTGFSIL 63
           MSA   VPTLEVR+LRTHF+ P+GVLPAVDD+SLTLERGRILGLVGESGSGKTVTGFSIL
Sbjct: 1   MSAPAPVPTLEVRHLRTHFFTPAGVLPAVDDLSLTLERGRILGLVGESGSGKTVTGFSIL 60

Query: 64  GLLDAPGRIVGGQILFKGQDLVTLDKKSLRSLQGNRIAMIFQDPM 108
           GLLDAPGRIVGGQILF+GQDLVTLDKK+LRSLQG+RIAMIFQDPM
Sbjct: 61  GLLDAPGRIVGGQILFRGQDLVTLDKKALRSLQGHRIAMIFQDPM 105


>ref|YP_003774987.1| dipeptide/oligopeptide/nickel ABC transporter ATPase
           [Herbaspirillum seropedicae SmR1]
 gb|ADJ63079.1| ABC-type dipeptide/oligopeptide/nickel transport system, ATPase
           component protein [Herbaspirillum seropedicae SmR1]
          Length = 330

 Score =  171 bits (432), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 81/97 (83%), Positives = 91/97 (93%)

Query: 12  TLEVRNLRTHFYMPSGVLPAVDDVSLTLERGRILGLVGESGSGKTVTGFSILGLLDAPGR 71
           TLEVRNLRTHF+ P GVLPAVDDVSL++ RGRILGLVGESGSGK+VTGFSILG++DAPGR
Sbjct: 5   TLEVRNLRTHFFTPEGVLPAVDDVSLSVGRGRILGLVGESGSGKSVTGFSILGMVDAPGR 64

Query: 72  IVGGQILFKGQDLVTLDKKSLRSLQGNRIAMIFQDPM 108
           IVGG+ILF+G+DLV +DK SLR LQGNRIAMIFQDPM
Sbjct: 65  IVGGEILFQGRDLVRMDKTSLRELQGNRIAMIFQDPM 101


>ref|YP_003979791.1| oligopeptide transport ATP-binding protein OppD [Achromobacter
           xylosoxidans A8]
 gb|ADP17076.1| oligopeptide transport ATP-binding protein OppD [Achromobacter
           xylosoxidans A8]
          Length = 335

 Score =  166 bits (419), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 82/117 (70%), Positives = 96/117 (82%), Gaps = 3/117 (2%)

Query: 11  PTLEVRNLRTHFYMPSGVLPAVDDVSLTLERGRILGLVGESGSGKTVTGFSILGLLDAPG 70
           PTLEVRNLRTHF+  +GVLPAVDDVS TLERG+ILGLVGESGSGK+VTGFSI+GL+DAPG
Sbjct: 11  PTLEVRNLRTHFHTRAGVLPAVDDVSFTLERGKILGLVGESGSGKSVTGFSIMGLVDAPG 70

Query: 71  RIVGGQILFKGQDLVTLDKKSLRSLQGNRIAMIFQDPM---XPSRRRSCRKCKSWRA 124
           RIVGG++LF+G+DL  L  + LR LQGNRIAMIFQDPM    P  R   +  ++ RA
Sbjct: 71  RIVGGEVLFQGRDLTKLAPRELRKLQGNRIAMIFQDPMMTLNPVLRVDAQMIETVRA 127


>ref|ZP_06688336.1| oligopeptide ABC superfamily ATP binding cassette transporter, ABC
           protein [Achromobacter piechaudii ATCC 43553]
 gb|EFF74756.1| oligopeptide ABC superfamily ATP binding cassette transporter, ABC
           protein [Achromobacter piechaudii ATCC 43553]
          Length = 336

 Score =  164 bits (414), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 83/123 (67%), Positives = 99/123 (80%), Gaps = 3/123 (2%)

Query: 5   SATHSVPTLEVRNLRTHFYMPSGVLPAVDDVSLTLERGRILGLVGESGSGKTVTGFSILG 64
           +AT +  TLEVRNLRTHF+  +GVLPAVDDVS TLERG+ILGLVGESGSGK+VTGFSI+G
Sbjct: 5   TATGAPATLEVRNLRTHFHTRAGVLPAVDDVSFTLERGKILGLVGESGSGKSVTGFSIMG 64

Query: 65  LLDAPGRIVGGQILFKGQDLVTLDKKSLRSLQGNRIAMIFQDPM---XPSRRRSCRKCKS 121
           L+DAPGRIVGG++LF+G+DL  L  + LR LQGNRIAMIFQDPM    P  R   +  ++
Sbjct: 65  LVDAPGRIVGGEVLFQGRDLTKLSPRDLRRLQGNRIAMIFQDPMMTLNPVLRVDVQMIET 124

Query: 122 WRA 124
            RA
Sbjct: 125 VRA 127


>gb|EFV84688.1| oligopeptide/dipeptide ABC transporter [Achromobacter xylosoxidans
           C54]
          Length = 340

 Score =  162 bits (409), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 80/116 (68%), Positives = 94/116 (81%), Gaps = 3/116 (2%)

Query: 12  TLEVRNLRTHFYMPSGVLPAVDDVSLTLERGRILGLVGESGSGKTVTGFSILGLLDAPGR 71
           TLEVRNLRTHF+  +G LPAVDDVS TLERG+ILGLVGESGSGK+VTGFSI+GL+DAPGR
Sbjct: 17  TLEVRNLRTHFFTRAGTLPAVDDVSFTLERGKILGLVGESGSGKSVTGFSIMGLVDAPGR 76

Query: 72  IVGGQILFKGQDLVTLDKKSLRSLQGNRIAMIFQDPM---XPSRRRSCRKCKSWRA 124
           +VGGQ+LF+G+DL  L  + LR LQGNRIAMIFQDPM    P  R   +  ++ RA
Sbjct: 77  VVGGQVLFQGRDLTQLAPRELRKLQGNRIAMIFQDPMMTLNPVLRVDVQMIETVRA 132