BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0078.p (304 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACF93774.1| ABC-type sugar transport system permease componen... 547 e-154 ref|YP_003777925.1| sugar ABC transporter permease [Herbaspirill... 547 e-154 ref|YP_004753256.1| N-acetyl-D-glucosamine ABC transport system,... 546 e-153 ref|YP_438021.1| sugar ABC transporter permease [Hahella chejuen... 388 e-106 ref|YP_004481068.1| ABC transporter integral membrane protein [M... 386 e-105 >gb|ACF93774.1| ABC-type sugar transport system permease component [Collimonas fungivorans Ter331] Length = 307 Score = 547 bits (1409), Expect = e-154, Method: Compositional matrix adjust. Identities = 273/299 (91%), Positives = 284/299 (94%) Query: 6 PWHIVAFLAPAVIIYSMFSALPLLDTLRLGFYTSNDAGVHSFVGLDNYRTILFDSDWSTA 65 PWHIV FLAPAVIIYSMFSALPLLDTLRLGFYTSNDAGVHSFVGL NY TILFDSDWS A Sbjct: 9 PWHIVVFLAPAVIIYSMFSALPLLDTLRLGFYTSNDAGVHSFVGLANYHTILFDSDWSKA 68 Query: 66 FWNAMWNNVKFFCIHMLLQNPIGLLLATLFSLKGLRGARTYRTLIFLPTLLSVVIIGFIW 125 FWNAM NNVKFF IHMLLQNPIGLLLATLFSLKGLRGARTYRTLIFLPTLLSVVIIGFIW Sbjct: 69 FWNAMLNNVKFFAIHMLLQNPIGLLLATLFSLKGLRGARTYRTLIFLPTLLSVVIIGFIW 128 Query: 126 QLIISPLWGVGEKLMTLVGLGDYFAPFLGQESTALFTLSLISVWQYIGIPMMLIYAALLA 185 QLI+SPLWGVGE LMT VGLGDYFAP+LGQESTAL TL L+SVWQY+GIPMMLIYAALLA Sbjct: 129 QLILSPLWGVGEGLMTHVGLGDYFAPWLGQESTALLTLGLVSVWQYVGIPMMLIYAALLA 188 Query: 186 VPEEVLEAAHAEGASALRIFWQIKLPLIWPTLGLVTILTFVANFNAFDLIYSVKGALAGP 245 VPEEVLEAA+AEGAS+ RIFWQIKLPLI PTLGLVTILTFVANFNAFDLIYSVKGALAGP Sbjct: 189 VPEEVLEAAYAEGASSFRIFWQIKLPLILPTLGLVTILTFVANFNAFDLIYSVKGALAGP 248 Query: 246 NYSSDLLGTFFYRTFFGYQAQVGSPTMGAAVATLMFLVILAGVGAYFYLVQRKLTRYEL 304 NY++D+LGTFFYRTFFGYQAQ+GSPTMGAAVATLMFLVIL GV +YFY VQRKLTRYEL Sbjct: 249 NYTTDILGTFFYRTFFGYQAQIGSPTMGAAVATLMFLVILLGVASYFYFVQRKLTRYEL 307 >ref|YP_003777925.1| sugar ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ66017.1| ABC-type sugar transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 304 Score = 547 bits (1409), Expect = e-154, Method: Compositional matrix adjust. Identities = 269/304 (88%), Positives = 287/304 (94%) Query: 1 VKTARPWHIVAFLAPAVIIYSMFSALPLLDTLRLGFYTSNDAGVHSFVGLDNYRTILFDS 60 +KT R W + LAPAV+IY++FSALPLLDTLRLGFYT+NDAGV SFVGLDNYRTILFD Sbjct: 1 MKTIRAWQLAVLLAPAVLIYALFSALPLLDTLRLGFYTANDAGVRSFVGLDNYRTILFDP 60 Query: 61 DWSTAFWNAMWNNVKFFCIHMLLQNPIGLLLATLFSLKGLRGARTYRTLIFLPTLLSVVI 120 DWS AFWNAMWNNVKFFCIHM LQNPIGLLLATLFSLKGLRGARTYRTLIFLPTLLSVVI Sbjct: 61 DWSAAFWNAMWNNVKFFCIHMALQNPIGLLLATLFSLKGLRGARTYRTLIFLPTLLSVVI 120 Query: 121 IGFIWQLIISPLWGVGEKLMTLVGLGDYFAPFLGQESTALFTLSLISVWQYIGIPMMLIY 180 IGFIWQLI+SPLWGVGEKL+ VGL D+FAP+LGQESTAL TLSLISVWQY+GIPMMLIY Sbjct: 121 IGFIWQLILSPLWGVGEKLLGTVGLADWFAPWLGQESTALLTLSLISVWQYVGIPMMLIY 180 Query: 181 AALLAVPEEVLEAAHAEGASALRIFWQIKLPLIWPTLGLVTILTFVANFNAFDLIYSVKG 240 AALLAVPEEVLEAAHAEGASA+RIFWQIKLPLI+PTLGLVTILTFVANFNAFDLIYSVKG Sbjct: 181 AALLAVPEEVLEAAHAEGASAMRIFWQIKLPLIYPTLGLVTILTFVANFNAFDLIYSVKG 240 Query: 241 ALAGPNYSSDLLGTFFYRTFFGYQAQVGSPTMGAAVATLMFLVILAGVGAYFYLVQRKLT 300 ALAGPNY+SDLLGT+FYRTFFGYQAQ+GSPTMGAAVATLMFLVIL GVGAYF LVQR+LT Sbjct: 241 ALAGPNYASDLLGTYFYRTFFGYQAQIGSPTMGAAVATLMFLVILGGVGAYFVLVQRRLT 300 Query: 301 RYEL 304 RY + Sbjct: 301 RYAM 304 >ref|YP_004753256.1| N-acetyl-D-glucosamine ABC transport system, permease 1 [Collimonas fungivorans Ter331] gb|AEK62433.1| N-Acetyl-D-glucosamine ABC transport system, permease protein 1 [Collimonas fungivorans Ter331] Length = 326 Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust. Identities = 273/299 (91%), Positives = 284/299 (94%) Query: 6 PWHIVAFLAPAVIIYSMFSALPLLDTLRLGFYTSNDAGVHSFVGLDNYRTILFDSDWSTA 65 PWHIV FLAPAVIIYSMFSALPLLDTLRLGFYTSNDAGVHSFVGL NY TILFDSDWS A Sbjct: 28 PWHIVVFLAPAVIIYSMFSALPLLDTLRLGFYTSNDAGVHSFVGLANYHTILFDSDWSKA 87 Query: 66 FWNAMWNNVKFFCIHMLLQNPIGLLLATLFSLKGLRGARTYRTLIFLPTLLSVVIIGFIW 125 FWNAM NNVKFF IHMLLQNPIGLLLATLFSLKGLRGARTYRTLIFLPTLLSVVIIGFIW Sbjct: 88 FWNAMLNNVKFFAIHMLLQNPIGLLLATLFSLKGLRGARTYRTLIFLPTLLSVVIIGFIW 147 Query: 126 QLIISPLWGVGEKLMTLVGLGDYFAPFLGQESTALFTLSLISVWQYIGIPMMLIYAALLA 185 QLI+SPLWGVGE LMT VGLGDYFAP+LGQESTAL TL L+SVWQY+GIPMMLIYAALLA Sbjct: 148 QLILSPLWGVGEGLMTHVGLGDYFAPWLGQESTALLTLGLVSVWQYVGIPMMLIYAALLA 207 Query: 186 VPEEVLEAAHAEGASALRIFWQIKLPLIWPTLGLVTILTFVANFNAFDLIYSVKGALAGP 245 VPEEVLEAA+AEGAS+ RIFWQIKLPLI PTLGLVTILTFVANFNAFDLIYSVKGALAGP Sbjct: 208 VPEEVLEAAYAEGASSFRIFWQIKLPLILPTLGLVTILTFVANFNAFDLIYSVKGALAGP 267 Query: 246 NYSSDLLGTFFYRTFFGYQAQVGSPTMGAAVATLMFLVILAGVGAYFYLVQRKLTRYEL 304 NY++D+LGTFFYRTFFGYQAQ+GSPTMGAAVATLMFLVIL GV +YFY VQRKLTRYEL Sbjct: 268 NYTTDILGTFFYRTFFGYQAQIGSPTMGAAVATLMFLVILLGVASYFYFVQRKLTRYEL 326 >ref|YP_438021.1| sugar ABC transporter permease [Hahella chejuensis KCTC 2396] gb|ABC33596.1| ABC-type sugar transport system, permease components [Hahella chejuensis KCTC 2396] Length = 310 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 193/304 (63%), Positives = 244/304 (80%) Query: 1 VKTARPWHIVAFLAPAVIIYSMFSALPLLDTLRLGFYTSNDAGVHSFVGLDNYRTILFDS 60 ++ PWHI+ FLAP ++IY S PLLDTLRLGF++ + +G FVG+ NY +LF Sbjct: 7 IRKPFPWHILVFLAPGLLIYLTVSVYPLLDTLRLGFFSEDKSGATFFVGMQNYANLLFSE 66 Query: 61 DWSTAFWNAMWNNVKFFCIHMLLQNPIGLLLATLFSLKGLRGARTYRTLIFLPTLLSVVI 120 WS FWNA+ NN+ FF IHMLLQNPIGLLLA L S LR + TYRTL+F+PT+LSVVI Sbjct: 67 VWSEPFWNALKNNLMFFVIHMLLQNPIGLLLALLLSSPRLRLSGTYRTLLFMPTMLSVVI 126 Query: 121 IGFIWQLIISPLWGVGEKLMTLVGLGDYFAPFLGQESTALFTLSLISVWQYIGIPMMLIY 180 +GF+WQL++SPLWG+ E M +GLGDYF +LG+E TAL TLSLISVWQ++GIPMMLIY Sbjct: 127 VGFVWQLLLSPLWGISEDFMYNIGLGDYFDAWLGKEGTALVTLSLISVWQFVGIPMMLIY 186 Query: 181 AALLAVPEEVLEAAHAEGASALRIFWQIKLPLIWPTLGLVTILTFVANFNAFDLIYSVKG 240 AALL +PE++ +A +GA++ +IFW IKLPL+ PT+ +V+ILTFVANFNAF+LIY+VKG Sbjct: 187 AALLNIPEDLNDAGVVDGANSWQIFWNIKLPLLLPTISMVSILTFVANFNAFELIYAVKG 246 Query: 241 ALAGPNYSSDLLGTFFYRTFFGYQAQVGSPTMGAAVATLMFLVILAGVGAYFYLVQRKLT 300 ALAGPN+SSD++GT FYRTFFG+Q Q GSPTMGAAVATLMFL+IL GV Y + VQR++ Sbjct: 247 ALAGPNFSSDIMGTLFYRTFFGFQLQQGSPTMGAAVATLMFLIILIGVAIYLFFVQRRIQ 306 Query: 301 RYEL 304 R++L Sbjct: 307 RFQL 310 >ref|YP_004481068.1| ABC transporter integral membrane protein [Marinomonas posidonica IVIA-Po-181] gb|AEF54149.1| ABC-type transporter, integral membrane subunit [Marinomonas posidonica IVIA-Po-181] Length = 311 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 185/298 (62%), Positives = 238/298 (79%), Gaps = 1/298 (0%) Query: 6 PWHIVAFLAPAVIIYSMFSALPLLDTLRLGFYTSNDAGVHSFVGLDNYRTILFDSDWSTA 65 PWH+ FL P ++IY FS PLLDTL L Y AG FVGL N+ T++ D +WS+A Sbjct: 14 PWHLWGFLGPGLLIYLTFSVYPLLDTLILSLY-EEQAGQSEFVGLKNFITLVTDENWSSA 72 Query: 66 FWNAMWNNVKFFCIHMLLQNPIGLLLATLFSLKGLRGARTYRTLIFLPTLLSVVIIGFIW 125 FWNA+ NN++FF HMLLQNPIGLLLA L S LR A +YRTLIF+PT+LSVVIIGF+W Sbjct: 73 FWNALSNNLQFFAFHMLLQNPIGLLLAVLLSSPKLRLASSYRTLIFMPTMLSVVIIGFVW 132 Query: 126 QLIISPLWGVGEKLMTLVGLGDYFAPFLGQESTALFTLSLISVWQYIGIPMMLIYAALLA 185 QLI+SP+WG+ E+ + +GLG YF +LG+E +AL TLS ISVWQ++GIPMMLIYA LL Sbjct: 133 QLILSPIWGISEEFLYSIGLGQYFDAWLGKEGSALVTLSFISVWQFVGIPMMLIYATLLN 192 Query: 186 VPEEVLEAAHAEGASALRIFWQIKLPLIWPTLGLVTILTFVANFNAFDLIYSVKGALAGP 245 +P+++++A+ +GAS ++ F+ IKLPLI PT+ +V+ILTFVANFNAF+LIY+VKGALAGP Sbjct: 193 IPDDIIDASTVDGASPMQTFFHIKLPLILPTIAMVSILTFVANFNAFELIYAVKGALAGP 252 Query: 246 NYSSDLLGTFFYRTFFGYQAQVGSPTMGAAVATLMFLVILAGVGAYFYLVQRKLTRYE 303 N+S+DLLGTFFYRTFFG+Q Q GS TMGAAVATLMFL+IL GV + + +QR++ R++ Sbjct: 253 NFSTDLLGTFFYRTFFGFQLQQGSSTMGAAVATLMFLIILVGVMLFLFFIQRRIQRFQ 310