BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0071.p (228 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004153223.1| family 5 extracellular solute-binding protei... 359 2e-97 ref|YP_547242.1| extracellular solute-binding protein [Polaromon... 358 4e-97 ref|YP_002942772.1| family 5 extracellular solute-binding protei... 357 5e-97 ref|YP_584080.1| PepT family ABC transporter periplasmic protein... 356 2e-96 ref|YP_004685337.1| peptide ABC transporter permease [Cupriavidu... 356 2e-96 >ref|YP_004153223.1| family 5 extracellular solute-binding protein [Variovorax paradoxus EPS] gb|ADU35112.1| extracellular solute-binding protein family 5 [Variovorax paradoxus EPS] Length = 553 Score = 359 bits (921), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 172/228 (75%), Positives = 195/228 (85%), Gaps = 3/228 (1%) Query: 1 VNRPAMKQLLGGLMGEATGTVEPGHPWRGNPSFHIKYDPDGARKLMTEAGYSAAKPLKVK 60 ++R MKQLLGG+M E GTV PGHPW G PSF I+YD A+ LMT+AGYSAAKP+KVK Sbjct: 329 IDRGGMKQLLGGMMAEPKGTVPPGHPWFGKPSFDIRYDVKAAQALMTQAGYSAAKPIKVK 388 Query: 61 VQISASGSGQMQPLPMNEFMQQNLKACFIDVQFDVIEWNTLYTNWRIGAKDPSAHGSDAV 120 VQISASGSGQMQPLPMNEF QQ+LK CF DVQFDVIEWNTL+TNWR GAKDPSA+G++AV Sbjct: 389 VQISASGSGQMQPLPMNEFAQQSLKQCFFDVQFDVIEWNTLFTNWRKGAKDPSANGANAV 448 Query: 121 NISFAAMDPFFAMVRFVSSKAAPHXNWVSNNWGFYSNPEVDAIIAKARTTFDARQRDALL 180 NISFAAMDPFFAMVRFVS+KA P VSNNWG+Y N EVD ++A ART+FD + RDA L Sbjct: 449 NISFAAMDPFFAMVRFVSTKAFPP---VSNNWGYYGNAEVDKLVADARTSFDDKARDAAL 505 Query: 181 AQLHAKIVDEAPFVWVAHDTGPRAISAKVKGVVQPQSWFIDIATMTMD 228 A+LH IVD+APFVW+AHD GPRA+SAKVK VVQP+SWFIDIATMTMD Sbjct: 506 AKLHTHIVDDAPFVWIAHDVGPRAMSAKVKNVVQPKSWFIDIATMTMD 553 >ref|YP_547242.1| extracellular solute-binding protein [Polaromonas sp. JS666] gb|ABE42344.1| extracellular solute-binding protein, family 5 [Polaromonas sp. JS666] Length = 566 Score = 358 bits (919), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 171/228 (75%), Positives = 196/228 (85%), Gaps = 3/228 (1%) Query: 1 VNRPAMKQLLGGLMGEATGTVEPGHPWRGNPSFHIKYDPDGARKLMTEAGYSAAKPLKVK 60 V+R + QLLGG+M E GTV PGHPW GNP F IKYD GA+ LMT+AG+SAAKP+KVK Sbjct: 342 VDRGGLSQLLGGMMAEPKGTVPPGHPWWGNPKFDIKYDVKGAQALMTQAGFSAAKPVKVK 401 Query: 61 VQISASGSGQMQPLPMNEFMQQNLKACFIDVQFDVIEWNTLYTNWRIGAKDPSAHGSDAV 120 VQISASGSGQMQPLPMNEFMQQ+LK CF DVQFDVIEWNTL+TNWR GAKDPSA+G++AV Sbjct: 402 VQISASGSGQMQPLPMNEFMQQSLKQCFFDVQFDVIEWNTLFTNWRKGAKDPSANGANAV 461 Query: 121 NISFAAMDPFFAMVRFVSSKAAPHXNWVSNNWGFYSNPEVDAIIAKARTTFDARQRDALL 180 N+SFAAMDPFFAMVRFVS+K P VSNNWG+Y N +VD ++A ART+FD + RDA L Sbjct: 462 NVSFAAMDPFFAMVRFVSTKTFPP---VSNNWGYYGNADVDKLVADARTSFDEKSRDAAL 518 Query: 181 AQLHAKIVDEAPFVWVAHDTGPRAISAKVKGVVQPQSWFIDIATMTMD 228 A+LHA IV++APFVWVAHD GPRA+SAKVK VVQP+SWFIDIATMTMD Sbjct: 519 ARLHAHIVEDAPFVWVAHDVGPRAMSAKVKNVVQPKSWFIDIATMTMD 566 >ref|YP_002942772.1| family 5 extracellular solute-binding protein [Variovorax paradoxus S110] gb|ACS17506.1| extracellular solute-binding protein family 5 [Variovorax paradoxus S110] Length = 552 Score = 357 bits (917), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 170/228 (74%), Positives = 195/228 (85%), Gaps = 3/228 (1%) Query: 1 VNRPAMKQLLGGLMGEATGTVEPGHPWRGNPSFHIKYDPDGARKLMTEAGYSAAKPLKVK 60 ++R MKQLLGG+M E GTV PGHPW G P+F I+YD A+ LMT+AGYSAAKP+KVK Sbjct: 328 IDRGGMKQLLGGMMAEPKGTVPPGHPWFGTPAFDIRYDVKAAQALMTQAGYSAAKPIKVK 387 Query: 61 VQISASGSGQMQPLPMNEFMQQNLKACFIDVQFDVIEWNTLYTNWRIGAKDPSAHGSDAV 120 VQISASGSGQMQPLPMNEF QQ+LK CF DVQFDVIEWNTL+TNWR G+KDPSA+G++AV Sbjct: 388 VQISASGSGQMQPLPMNEFAQQSLKQCFFDVQFDVIEWNTLFTNWRKGSKDPSANGANAV 447 Query: 121 NISFAAMDPFFAMVRFVSSKAAPHXNWVSNNWGFYSNPEVDAIIAKARTTFDARQRDALL 180 NISFAAMDPFFAMVRFVS+KA P VSNNWG+Y N EVD ++A ART+FD + RDA L Sbjct: 448 NISFAAMDPFFAMVRFVSTKAFPP---VSNNWGYYGNAEVDKLVADARTSFDDKARDAAL 504 Query: 181 AQLHAKIVDEAPFVWVAHDTGPRAISAKVKGVVQPQSWFIDIATMTMD 228 A+LH IVD+APFVW+AHD GPRA+SAKVK VVQP+SWFIDIATMTMD Sbjct: 505 ARLHTHIVDDAPFVWIAHDVGPRAMSAKVKNVVQPKSWFIDIATMTMD 552 >ref|YP_584080.1| PepT family ABC transporter periplasmic protein [Cupriavidus metallidurans CH34] gb|ABF08811.1| ABC-type transporter, periplasmic component: PepT family [Cupriavidus metallidurans CH34] Length = 586 Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 167/228 (73%), Positives = 194/228 (85%), Gaps = 3/228 (1%) Query: 1 VNRPAMKQLLGGLMGEATGTVEPGHPWRGNPSFHIKYDPDGARKLMTEAGYSAAKPLKVK 60 VNR +K LLGG M EA G VE G+PW GNP+F IKYDP ARKLMTEAGYSAAKP+KVK Sbjct: 362 VNRAGLKTLLGGYMAEAKGIVEAGNPWWGNPAFTIKYDPAAARKLMTEAGYSAAKPVKVK 421 Query: 61 VQISASGSGQMQPLPMNEFMQQNLKACFIDVQFDVIEWNTLYTNWRIGAKDPSAHGSDAV 120 VQ+SASGSGQMQPLPMNE++QQNLK CF DV FDV+EWNTL+TNWRIGAKD SAHG++A+ Sbjct: 422 VQVSASGSGQMQPLPMNEYVQQNLKECFFDVDFDVVEWNTLFTNWRIGAKDASAHGANAI 481 Query: 121 NISFAAMDPFFAMVRFVSSKAAPHXNWVSNNWGFYSNPEVDAIIAKARTTFDARQRDALL 180 N+SFAAMDPFFAMVRFVS+K P VSNNWG++ N E D +I ART+F ++RDA L Sbjct: 482 NVSFAAMDPFFAMVRFVSTKTQPP---VSNNWGYFGNAEFDKLIETARTSFGEKERDAAL 538 Query: 181 AQLHAKIVDEAPFVWVAHDTGPRAISAKVKGVVQPQSWFIDIATMTMD 228 A+LHA+IV+EAPFV +AHD GPRAIS K+KGVVQPQSWFIDIATM++D Sbjct: 539 AKLHARIVEEAPFVLIAHDVGPRAISRKIKGVVQPQSWFIDIATMSID 586 >ref|YP_004685337.1| peptide ABC transporter permease [Cupriavidus necator N-1] gb|AEI76856.1| ABC transport system permease protein PepT family [Cupriavidus necator N-1] Length = 558 Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 167/228 (73%), Positives = 193/228 (84%), Gaps = 3/228 (1%) Query: 1 VNRPAMKQLLGGLMGEATGTVEPGHPWRGNPSFHIKYDPDGARKLMTEAGYSAAKPLKVK 60 VNR +K LLGG M EA G VE G+PW GNP F IKYDP A+KLM EAGYSAAKP+KVK Sbjct: 334 VNRSGLKTLLGGYMAEAKGIVETGNPWWGNPKFDIKYDPAAAKKLMQEAGYSAAKPVKVK 393 Query: 61 VQISASGSGQMQPLPMNEFMQQNLKACFIDVQFDVIEWNTLYTNWRIGAKDPSAHGSDAV 120 VQ+SASGSGQMQPLPMNE++QQNLK CFIDV FDV+EWNTL+TNWR+GAKD SAHG++A+ Sbjct: 394 VQVSASGSGQMQPLPMNEYVQQNLKECFIDVDFDVVEWNTLFTNWRVGAKDASAHGANAI 453 Query: 121 NISFAAMDPFFAMVRFVSSKAAPHXNWVSNNWGFYSNPEVDAIIAKARTTFDARQRDALL 180 N+SFAAMDPFFAMVRFVS+K P VSNNWG++ N E D +I ART+FD + RDA L Sbjct: 454 NVSFAAMDPFFAMVRFVSTKTQPP---VSNNWGYFGNAEFDKLIENARTSFDEKSRDAAL 510 Query: 181 AQLHAKIVDEAPFVWVAHDTGPRAISAKVKGVVQPQSWFIDIATMTMD 228 A+LHA+IV+E+PFV +AHD GPRAIS KVKGVVQPQSWFIDIATM+MD Sbjct: 511 ARLHARIVEESPFVLIAHDVGPRAISKKVKGVVQPQSWFIDIATMSMD 558