BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0065.p (341 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004753261.1| sugar isomerase [Collimonas fungivorans Ter3... 548 e-154 gb|ACF93779.1| NagB2 [Collimonas fungivorans Ter331] 542 e-152 ref|YP_004753629.1| sugar isomeraese [Collimonas fungivorans Ter... 514 e-144 gb|ACF93788.1| NagB1 [Collimonas fungivorans Ter331] 509 e-142 ref|YP_003777930.1| glucosamine 6-phosphate synthase [Herbaspiri... 489 e-136 >ref|YP_004753261.1| sugar isomerase [Collimonas fungivorans Ter331] gb|AEK62438.1| sugar isomerase [Collimonas fungivorans Ter331] Length = 340 Score = 548 bits (1411), Expect = e-154, Method: Compositional matrix adjust. Identities = 275/340 (80%), Positives = 301/340 (88%), Gaps = 1/340 (0%) Query: 1 LTSLMLKEARSAGSHVAEQLARDQARYAELGRWLRTAPPSGIVTVARGSSDHAANYCAYL 60 +TSLMLKEARSA HVA QL++D+ RYAELG+ LR APPS I+TVARGSSDHAANYCAYL Sbjct: 1 MTSLMLKEARSAAEHVALQLSQDRDRYAELGQRLRAAPPSTILTVARGSSDHAANYCAYL 60 Query: 61 TMVRLGHIVASLPMSLLTLNKAPLIARDALAIAISQSGQSPDVIEPIRYFRDGGATTVAL 120 M RLG IVASLP+SL+TLNKAPLIARDALAIAISQSGQSPDVIEPIRYFRD GATTVAL Sbjct: 61 IMARLGRIVASLPLSLVTLNKAPLIARDALAIAISQSGQSPDVIEPIRYFRDSGATTVAL 120 Query: 121 VNDAESPLAQTAEWTLPLHAGAELSVAATKSFIASLVAGALFAGHWQDDAGFLHALESLP 180 VND SPLA +AEWTLPLHAGAELSVAATKSFIASLVA A A HWQDDA FL A+++LP Sbjct: 121 VNDVASPLASSAEWTLPLHAGAELSVAATKSFIASLVAAARLAAHWQDDATFLAAIDALP 180 Query: 181 ESLQRAADSDWSKAVEILAPARNIMVVGRGIGFPLALEAALKFKETSAIQAEAFSGAEIK 240 ++L A DW+ A+++LAP+ IMVVGRGI PLALE+ALKFKETSAIQAEAFSGAEIK Sbjct: 181 QALTAATQLDWTPAIDVLAPSSRIMVVGRGISLPLALESALKFKETSAIQAEAFSGAEIK 240 Query: 241 HGPMALIHEDYPLLMFATRGPTQAGMLQLAXIEMRQRGAKVLLAAPADIAERDLTLPTAV 300 HGPMALI E YPLL+FATRGPTQAG+L+LA EMR RGAKVLLAAP D+A RDLTLP A Sbjct: 241 HGPMALIDEGYPLLIFATRGPTQAGLLKLAE-EMRGRGAKVLLAAPDDVAARDLTLPIAA 299 Query: 301 TPDLDPIVAIQAFYVMAAQLSVARGMDPDKPRHLSKVTKT 340 TPDLDPIVAIQAFYVMAAQL+VARGMDPD+PRHLSKVTKT Sbjct: 300 TPDLDPIVAIQAFYVMAAQLAVARGMDPDQPRHLSKVTKT 339 >gb|ACF93779.1| NagB2 [Collimonas fungivorans Ter331] Length = 336 Score = 542 bits (1396), Expect = e-152, Method: Compositional matrix adjust. Identities = 272/336 (80%), Positives = 297/336 (88%), Gaps = 1/336 (0%) Query: 5 MLKEARSAGSHVAEQLARDQARYAELGRWLRTAPPSGIVTVARGSSDHAANYCAYLTMVR 64 MLKEARSA HVA QL++D+ RYAELG+ LR APPS I+TVARGSSDHAANYCAYL M R Sbjct: 1 MLKEARSAAEHVALQLSQDRDRYAELGQRLRAAPPSTILTVARGSSDHAANYCAYLIMAR 60 Query: 65 LGHIVASLPMSLLTLNKAPLIARDALAIAISQSGQSPDVIEPIRYFRDGGATTVALVNDA 124 LG IVASLP+SL+TLNKAPLIARDALAIAISQSGQSPDVIEPIRYFRD GATTVALVND Sbjct: 61 LGRIVASLPLSLVTLNKAPLIARDALAIAISQSGQSPDVIEPIRYFRDSGATTVALVNDV 120 Query: 125 ESPLAQTAEWTLPLHAGAELSVAATKSFIASLVAGALFAGHWQDDAGFLHALESLPESLQ 184 SPLA +AEWTLPLHAGAELSVAATKSFIASLVA A A HWQDDA FL A+++LP++L Sbjct: 121 ASPLASSAEWTLPLHAGAELSVAATKSFIASLVAAARLAAHWQDDATFLAAIDALPQALT 180 Query: 185 RAADSDWSKAVEILAPARNIMVVGRGIGFPLALEAALKFKETSAIQAEAFSGAEIKHGPM 244 A DW+ A+++LAP+ IMVVGRGI PLALE+ALKFKETSAIQAEAFSGAEIKHGPM Sbjct: 181 AATQLDWTPAIDVLAPSSRIMVVGRGISLPLALESALKFKETSAIQAEAFSGAEIKHGPM 240 Query: 245 ALIHEDYPLLMFATRGPTQAGMLQLAXIEMRQRGAKVLLAAPADIAERDLTLPTAVTPDL 304 ALI E YPLL+FATRGPTQAG+L+LA EMR RGAKVLLAAP D+A RDLTLP A TPDL Sbjct: 241 ALIDEGYPLLIFATRGPTQAGLLKLAE-EMRGRGAKVLLAAPDDVAARDLTLPIAATPDL 299 Query: 305 DPIVAIQAFYVMAAQLSVARGMDPDKPRHLSKVTKT 340 DPIVAIQAFYVMAAQL+VARGMDPD+PRHLSKVTKT Sbjct: 300 DPIVAIQAFYVMAAQLAVARGMDPDQPRHLSKVTKT 335 >ref|YP_004753629.1| sugar isomeraese [Collimonas fungivorans Ter331] gb|AEK62806.1| sugar isomeraese [Collimonas fungivorans Ter331] Length = 345 Score = 514 bits (1325), Expect = e-144, Method: Compositional matrix adjust. Identities = 257/341 (75%), Positives = 290/341 (85%), Gaps = 1/341 (0%) Query: 1 LTSLMLKEARSAGSHVAEQLARDQARYAELGRWLRTAPPSGIVTVARGSSDHAANYCAYL 60 +SLML+EA SA HVA QL RD YA LG LR+A P+ ++TVARGSSDHAANYCAYL Sbjct: 6 FSSLMLQEACSAAEHVALQLQRDTDSYAALGARLRSAQPANVLTVARGSSDHAANYCAYL 65 Query: 61 TMVRLGHIVASLPMSLLTLNKAPLIARDALAIAISQSGQSPDVIEPIRYFRDGGATTVAL 120 M RLG IVASLPMSL+TL K+PL RDALAIAISQSGQSPDVIEPIRYFR+GGATTVAL Sbjct: 66 IMARLGRIVASLPMSLVTLYKSPLQTRDALAIAISQSGQSPDVIEPIRYFREGGATTVAL 125 Query: 121 VNDAESPLAQTAEWTLPLHAGAELSVAATKSFIASLVAGALFAGHWQDDAGFLHALESLP 180 VNDA SPLA +AEW+LPLHAG ELSVAATKSFI SL A A HWQ DA FL + +LP Sbjct: 126 VNDAASPLAHSAEWSLPLHAGPELSVAATKSFITSLTAAARLVAHWQGDAEFLAQIGALP 185 Query: 181 ESLQRAADSDWSKAVEILAPARNIMVVGRGIGFPLALEAALKFKETSAIQAEAFSGAEIK 240 +LQ A ++DWS A+++LAPA IMVVGRG FP+ALEAALKFKETS +QAEAFSGAEIK Sbjct: 186 AALQLATETDWSTAIDVLAPASRIMVVGRGTSFPVALEAALKFKETSVLQAEAFSGAEIK 245 Query: 241 HGPMALIHEDYPLLMFATRGPTQAGMLQLAXIEMRQRGAKVLLAAPADIAERDLTLPTAV 300 HGPMALI+E YPLL+FATRGPTQAG+++LA EMR RGA+VLLAAPAD++ERDLTLP A Sbjct: 246 HGPMALINEGYPLLIFATRGPTQAGLVKLAE-EMRGRGARVLLAAPADVSERDLTLPLAP 304 Query: 301 TPDLDPIVAIQAFYVMAAQLSVARGMDPDKPRHLSKVTKTS 341 TPDLDPIVAIQAFYVMAA LS+ARG+DPD+PRHLSKVTKT+ Sbjct: 305 TPDLDPIVAIQAFYVMAANLSIARGLDPDRPRHLSKVTKTN 345 >gb|ACF93788.1| NagB1 [Collimonas fungivorans Ter331] Length = 336 Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust. Identities = 255/337 (75%), Positives = 287/337 (85%), Gaps = 1/337 (0%) Query: 5 MLKEARSAGSHVAEQLARDQARYAELGRWLRTAPPSGIVTVARGSSDHAANYCAYLTMVR 64 ML+EA SA HVA QL RD YA LG LR+A P+ ++TVARGSSDHAANYCAYL M R Sbjct: 1 MLQEACSAAEHVALQLQRDTDSYAALGARLRSAQPANVLTVARGSSDHAANYCAYLIMAR 60 Query: 65 LGHIVASLPMSLLTLNKAPLIARDALAIAISQSGQSPDVIEPIRYFRDGGATTVALVNDA 124 LG IVASLPMSL+TL K+PL RDALAIAISQSGQSPDVIEPIRYFR+GGATTVALVNDA Sbjct: 61 LGRIVASLPMSLVTLYKSPLQTRDALAIAISQSGQSPDVIEPIRYFREGGATTVALVNDA 120 Query: 125 ESPLAQTAEWTLPLHAGAELSVAATKSFIASLVAGALFAGHWQDDAGFLHALESLPESLQ 184 SPLA +AEW+LPLHAG ELSVAATKSFI SL A A HWQ DA FL + +LP +LQ Sbjct: 121 ASPLAHSAEWSLPLHAGPELSVAATKSFITSLTAAARLVAHWQGDAEFLAQIGALPAALQ 180 Query: 185 RAADSDWSKAVEILAPARNIMVVGRGIGFPLALEAALKFKETSAIQAEAFSGAEIKHGPM 244 A ++DWS A+++LAPA IMVVGRG FP+ALEAALKFKETS +QAEAFSGAEIKHGPM Sbjct: 181 LATETDWSTAIDVLAPASRIMVVGRGTSFPVALEAALKFKETSVLQAEAFSGAEIKHGPM 240 Query: 245 ALIHEDYPLLMFATRGPTQAGMLQLAXIEMRQRGAKVLLAAPADIAERDLTLPTAVTPDL 304 ALI+E YPLL+FATRGPTQAG+++LA EMR RGA+VLLAAPAD++ERDLTLP A TPDL Sbjct: 241 ALINEGYPLLIFATRGPTQAGLVKLAE-EMRGRGARVLLAAPADVSERDLTLPLAPTPDL 299 Query: 305 DPIVAIQAFYVMAAQLSVARGMDPDKPRHLSKVTKTS 341 DPIVAIQAFYVMAA LS+ARG+DPD+PRHLSKVTKT+ Sbjct: 300 DPIVAIQAFYVMAANLSIARGLDPDRPRHLSKVTKTN 336 >ref|YP_003777930.1| glucosamine 6-phosphate synthase [Herbaspirillum seropedicae SmR1] gb|ADJ66022.1| glucosamine 6-phosphate synthase protein [Herbaspirillum seropedicae SmR1] Length = 336 Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust. Identities = 261/337 (77%), Positives = 280/337 (83%), Gaps = 1/337 (0%) Query: 5 MLKEARSAGSHVAEQLARDQARYAELGRWLRTAPPSGIVTVARGSSDHAANYCAYLTMVR 64 MLKEARSA +VA QL RDQ RYA LG LR APP+ IVTVARGSSDHAA YCAYL M R Sbjct: 1 MLKEARSAADYVAVQLTRDQDRYAALGARLRAAPPANIVTVARGSSDHAATYCAYLIMAR 60 Query: 65 LGHIVASLPMSLLTLNKAPLIARDALAIAISQSGQSPDVIEPIRYFRDGGATTVALVNDA 124 LG IVASLPMSL+TLN APL RDALAIA+SQSGQSPDV+EPIRYF GATTVALVN A Sbjct: 61 LGRIVASLPMSLVTLNHAPLQVRDALAIAVSQSGQSPDVVEPIRYFHAQGATTVALVNQA 120 Query: 125 ESPLAQTAEWTLPLHAGAELSVAATKSFIASLVAGALFAGHWQDDAGFLHALESLPESLQ 184 +SPLA A+W+LPLHAG E SVAATKSFIASLVA AL HWQDDA L+AL LP++L+ Sbjct: 121 DSPLASAAQWSLPLHAGVESSVAATKSFIASLVASALLTAHWQDDAALLNALAQLPDALR 180 Query: 185 RAADSDWSKAVEILAPARNIMVVGRGIGFPLALEAALKFKETSAIQAEAFSGAEIKHGPM 244 A DWS AV+ L PA IMVVGRGIGFPLALEAALK KET AIQAEAFSGAEIKHGP+ Sbjct: 181 AACACDWSDAVQALTPADRIMVVGRGIGFPLALEAALKCKETCAIQAEAFSGAEIKHGPI 240 Query: 245 ALIHEDYPLLMFATRGPTQAGMLQLAXIEMRQRGAKVLLAAPADIAERDLTLPTAVTPDL 304 ALI E YPLLMFA RGP+QAGML LA EMR RGAKVLLAAP D+ ERDLTLP A TPDL Sbjct: 241 ALIEEGYPLLMFAIRGPSQAGMLALAA-EMRVRGAKVLLAAPEDVVERDLTLPVAATPDL 299 Query: 305 DPIVAIQAFYVMAAQLSVARGMDPDKPRHLSKVTKTS 341 DPIVAIQAFYVMAAQLS ARGMD D+PRHL+KVTKT+ Sbjct: 300 DPIVAIQAFYVMAAQLSAARGMDADRPRHLNKVTKTN 336