BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0062.p (429 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775919.1| sugar permease of the major facilitator supe... 739 0.0 ref|YP_004753301.1| general substrate transporter [Collimonas fu... 733 0.0 ref|YP_004751528.1| general substrate transporter [Collimonas fu... 728 0.0 ref|YP_004153076.1| general substrate transporter [Variovorax pa... 706 0.0 ref|YP_002942648.1| general substrate transporter [Variovorax pa... 689 0.0 >ref|YP_003775919.1| sugar permease of the major facilitator superfamily protein [Herbaspirillum seropedicae SmR1] gb|ADJ64011.1| sugar permease of the major facilitator superfamily protein [Herbaspirillum seropedicae SmR1] Length = 428 Score = 739 bits (1908), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/423 (86%), Positives = 394/423 (93%), Gaps = 1/423 (0%) Query: 1 MTSPTIASSSKFATVLRVTSGNFMEMFDFFLFGFYASYISKAFFPSGDEFASLMLTFMTF 60 MT+ T AS SKF+TVLRVTSGNFMEMFDFFLFGFYA++ISKAFFPS +EFASLMLTFMTF Sbjct: 1 MTTST-ASQSKFSTVLRVTSGNFMEMFDFFLFGFYATHISKAFFPSDNEFASLMLTFMTF 59 Query: 61 GAGFLMRPLGAIILGAYVDRVGRRQGLIVTLALMALGTVLIAFVPGYATIGLLAPALVLI 120 GAGFLMRPLGAIILGAYVDRVGRRQGLIVTLALMALGT+LIAFVP YATIG LAP LVLI Sbjct: 60 GAGFLMRPLGAIILGAYVDRVGRRQGLIVTLALMALGTMLIAFVPSYATIGALAPLLVLI 119 Query: 121 GRLLQGFSAGVELGGVSVYLAEMATPGRKGFYVSWQSASQQVAIIFAAAIGYGLNIWLTK 180 GRLLQGFSAGVELGGVSVYLAEMATPG KGFYVSWQSASQQVAII AAAIGY L+ LT Sbjct: 120 GRLLQGFSAGVELGGVSVYLAEMATPGNKGFYVSWQSASQQVAIIVAAAIGYLLSTSLTP 179 Query: 181 DQVGDWGWRVPFFIGCMIVPVLFVIRRSLQETEEFLARKRKPNLNEIFRSMVENWKLVIA 240 +V WGWR+PFFIGC+IVPVLFVIRRSLQETEEF+ RK +P+ +IFRSM+ENWKLVIA Sbjct: 180 AEVSGWGWRIPFFIGCLIVPVLFVIRRSLQETEEFMRRKHRPSTGQIFRSMIENWKLVIA 239 Query: 241 GMMLVSMTTVSFYLITVYTPTFGKNVLKLSTESALIVTFCVGISNFIWLPVMGALSDRIG 300 GMMLVSMTTVSFYLITVYTPTFGKNVLKLSTE++LIVT CVG+SNFIWLP+MGALSDR+G Sbjct: 240 GMMLVSMTTVSFYLITVYTPTFGKNVLKLSTEASLIVTLCVGLSNFIWLPIMGALSDRVG 299 Query: 301 RRPLLLVFTILTILTAYPAMTWLVGDATFGKMLVVELWLSFLYASYNGAMVVALTEVMPV 360 RRPLL+ FT+LTILTAYPA+ WLV DA+F KML+VELWLSFLYASYNGAMVVALTEVMP Sbjct: 300 RRPLLVTFTVLTILTAYPAVNWLVHDASFAKMLIVELWLSFLYASYNGAMVVALTEVMPA 359 Query: 361 DVRTAGFSLAYSLATAVFGGFTPAIATGLIEITHDKAAPGLWMSFAAVCGLIATLVLYRK 420 DVRTAGFSLAYSLATAVFGGFTPAIATGLIE THDKAAPG+WMS AAVCGLIATL+LYR Sbjct: 360 DVRTAGFSLAYSLATAVFGGFTPAIATGLIEYTHDKAAPGIWMSTAAVCGLIATLILYRN 419 Query: 421 KSL 423 K++ Sbjct: 420 KAV 422 >ref|YP_004753301.1| general substrate transporter [Collimonas fungivorans Ter331] gb|AEK62478.1| General substrate transporter [Collimonas fungivorans Ter331] Length = 451 Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/423 (85%), Positives = 391/423 (92%) Query: 1 MTSPTIASSSKFATVLRVTSGNFMEMFDFFLFGFYASYISKAFFPSGDEFASLMLTFMTF 60 MT+ A+ SKF TVLRVTSGNFMEMFDFFLFGFYA+YISK FFPSGDEFASLMLTFMTF Sbjct: 13 MTAIAAATPSKFGTVLRVTSGNFMEMFDFFLFGFYATYISKTFFPSGDEFASLMLTFMTF 72 Query: 61 GAGFLMRPLGAIILGAYVDRVGRRQGLIVTLALMALGTVLIAFVPGYATIGLLAPALVLI 120 GAGFLMRPLGAI+LGAYVDRVGRRQGLIVTLALMALGTVLIAFVPG+ATIG LAP LVLI Sbjct: 73 GAGFLMRPLGAILLGAYVDRVGRRQGLIVTLALMALGTVLIAFVPGFATIGYLAPFLVLI 132 Query: 121 GRLLQGFSAGVELGGVSVYLAEMATPGRKGFYVSWQSASQQVAIIFAAAIGYGLNIWLTK 180 GRLLQGFSAGVELGGVSVYLAEMATPG KGFYVSWQSASQQVAII AAA+GY LNIWLT Sbjct: 133 GRLLQGFSAGVELGGVSVYLAEMATPGNKGFYVSWQSASQQVAIIVAAALGYALNIWLTP 192 Query: 181 DQVGDWGWRVPFFIGCMIVPVLFVIRRSLQETEEFLARKRKPNLNEIFRSMVENWKLVIA 240 Q+G WGWRVPFFIGCMIVPVLF+IRRSLQETEEF+ RK++P+ IFRSM++NW LVI Sbjct: 193 LQIGSWGWRVPFFIGCMIVPVLFMIRRSLQETEEFMKRKQRPDTRAIFRSMLDNWGLVIT 252 Query: 241 GMMLVSMTTVSFYLITVYTPTFGKNVLKLSTESALIVTFCVGISNFIWLPVMGALSDRIG 300 GMMLV+MTTVSFYLIT+YTPTFGKNVLKLST +LIVT CVGISNFIWLP+MGALSDRIG Sbjct: 253 GMMLVAMTTVSFYLITIYTPTFGKNVLKLSTADSLIVTLCVGISNFIWLPIMGALSDRIG 312 Query: 301 RRPLLLVFTILTILTAYPAMTWLVGDATFGKMLVVELWLSFLYASYNGAMVVALTEVMPV 360 RRP+L+ FT+LT+L+AYPAMTWL +F KMLVVELWLSFLYASYNGAMVVALTEVMPV Sbjct: 313 RRPILIFFTVLTVLSAYPAMTWLTSAPSFEKMLVVELWLSFLYASYNGAMVVALTEVMPV 372 Query: 361 DVRTAGFSLAYSLATAVFGGFTPAIATGLIEITHDKAAPGLWMSFAAVCGLIATLVLYRK 420 +VRTAGFSLAYSLATA+FGGFTPAIAT LIE T DKAAPGLWM+FAAVCGLIATLVLYRK Sbjct: 373 EVRTAGFSLAYSLATAIFGGFTPAIATALIEATGDKAAPGLWMTFAAVCGLIATLVLYRK 432 Query: 421 KSL 423 +S+ Sbjct: 433 RSV 435 >ref|YP_004751528.1| general substrate transporter [Collimonas fungivorans Ter331] gb|AEK60705.1| General substrate transporter [Collimonas fungivorans Ter331] Length = 478 Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/422 (84%), Positives = 386/422 (91%) Query: 5 TIASSSKFATVLRVTSGNFMEMFDFFLFGFYASYISKAFFPSGDEFASLMLTFMTFGAGF 64 T +S SKF TVLRVTSGNFMEMFDFFLFGFYA+YISK FFP+GDEFASLMLTFMTFGAGF Sbjct: 52 TQSSQSKFGTVLRVTSGNFMEMFDFFLFGFYATYISKTFFPAGDEFASLMLTFMTFGAGF 111 Query: 65 LMRPLGAIILGAYVDRVGRRQGLIVTLALMALGTVLIAFVPGYATIGLLAPALVLIGRLL 124 LMRPLGAIILGAYVDRVGRR+GLI TLALMALGT+LIAFVPGYA+IG AP LVLIGRLL Sbjct: 112 LMRPLGAIILGAYVDRVGRRKGLITTLALMALGTMLIAFVPGYASIGYAAPLLVLIGRLL 171 Query: 125 QGFSAGVELGGVSVYLAEMATPGRKGFYVSWQSASQQVAIIFAAAIGYGLNIWLTKDQVG 184 QGFSAGVELGGVSVYL+EMATPG KGFYVSWQSASQQVAII AAA+G+GL +WL Q+ Sbjct: 172 QGFSAGVELGGVSVYLSEMATPGHKGFYVSWQSASQQVAIIVAAALGFGLQVWLQPAQIA 231 Query: 185 DWGWRVPFFIGCMIVPVLFVIRRSLQETEEFLARKRKPNLNEIFRSMVENWKLVIAGMML 244 DWGWR+PFF+GCMIVPVLFVIRRSLQETEEF+ARK KP + EI RSMV+NW LV+AGMML Sbjct: 232 DWGWRIPFFVGCMIVPVLFVIRRSLQETEEFMARKHKPAMREILRSMVDNWGLVVAGMML 291 Query: 245 VSMTTVSFYLITVYTPTFGKNVLKLSTESALIVTFCVGISNFIWLPVMGALSDRIGRRPL 304 VSMTTVSFYLITVYTPTFGK+VLKL+T AL+VTFCVGISNFIWLPVMGALSDRIGR+PL Sbjct: 292 VSMTTVSFYLITVYTPTFGKSVLKLTTIDALVVTFCVGISNFIWLPVMGALSDRIGRKPL 351 Query: 305 LLVFTILTILTAYPAMTWLVGDATFGKMLVVELWLSFLYASYNGAMVVALTEVMPVDVRT 364 LLVFT+LTILTAYPA++WLV D TF KML+VELWLSFLYASYNGAMVVALTEVMPV+VRT Sbjct: 352 LLVFTVLTILTAYPALSWLVADPTFQKMLMVELWLSFLYASYNGAMVVALTEVMPVEVRT 411 Query: 365 AGFSLAYSLATAVFGGFTPAIATGLIEITHDKAAPGLWMSFAAVCGLIATLVLYRKKSLA 424 AGFSLAYSLATA+FGGFTPAIATGLIE T DK APG+WM+ AA+CGL ATL LYRK Sbjct: 412 AGFSLAYSLATAIFGGFTPAIATGLIEYTGDKGAPGMWMTAAAICGLFATLYLYRKNGNQ 471 Query: 425 VP 426 P Sbjct: 472 TP 473 >ref|YP_004153076.1| general substrate transporter [Variovorax paradoxus EPS] gb|ADU34965.1| general substrate transporter [Variovorax paradoxus EPS] Length = 447 Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/419 (82%), Positives = 385/419 (91%) Query: 3 SPTIASSSKFATVLRVTSGNFMEMFDFFLFGFYASYISKAFFPSGDEFASLMLTFMTFGA 62 S T ASSSKFATVLRVT GNFMEMFDFFLFGFYA+ ISKAFFP+G+EFASLMLTFMTFGA Sbjct: 17 SSTTASSSKFATVLRVTGGNFMEMFDFFLFGFYATQISKAFFPAGNEFASLMLTFMTFGA 76 Query: 63 GFLMRPLGAIILGAYVDRVGRRQGLIVTLALMALGTVLIAFVPGYATIGLLAPALVLIGR 122 GFLMRPLGAI LGAYVDRVGRR+GLIVTLALMALGT+LIA VP YATIG++AP LVLIGR Sbjct: 77 GFLMRPLGAIFLGAYVDRVGRRKGLIVTLALMALGTLLIACVPAYATIGVIAPLLVLIGR 136 Query: 123 LLQGFSAGVELGGVSVYLAEMATPGRKGFYVSWQSASQQVAIIFAAAIGYGLNIWLTKDQ 182 LLQGFSAGVELGGVSVYL+EMATPGRKGFYVSWQSASQQVAI+ AAA+GY LN+ T + Sbjct: 137 LLQGFSAGVELGGVSVYLSEMATPGRKGFYVSWQSASQQVAIVVAAALGYWLNVTFTSQE 196 Query: 183 VGDWGWRVPFFIGCMIVPVLFVIRRSLQETEEFLARKRKPNLNEIFRSMVENWKLVIAGM 242 +GD+ WRVPFF+GC+IVPVLF+IRRSLQETEEF+ARK +P+ EIF+SMV NW LV+AGM Sbjct: 197 IGDFYWRVPFFVGCLIVPVLFIIRRSLQETEEFMARKHRPDAREIFQSMVANWGLVVAGM 256 Query: 243 MLVSMTTVSFYLITVYTPTFGKNVLKLSTESALIVTFCVGISNFIWLPVMGALSDRIGRR 302 MLVSMTTVSFYLITVYTPTFGK+VL LST ALIVT CV ISNFIWLP+MGALSDR+GR+ Sbjct: 257 MLVSMTTVSFYLITVYTPTFGKSVLHLSTTDALIVTLCVAISNFIWLPIMGALSDRVGRK 316 Query: 303 PLLLVFTILTILTAYPAMTWLVGDATFGKMLVVELWLSFLYASYNGAMVVALTEVMPVDV 362 PLL++FT+LTILTAYP++ WLVG +F +ML VELWLSFLYASYNGAMVVALTEVMPV+V Sbjct: 317 PLLILFTVLTILTAYPSLKWLVGAPSFARMLEVELWLSFLYASYNGAMVVALTEVMPVNV 376 Query: 363 RTAGFSLAYSLATAVFGGFTPAIATGLIEITHDKAAPGLWMSFAAVCGLIATLVLYRKK 421 RTAGFSLAYSLATA+FGGFTPAIATGLIE+T DK APGLWM+ AA+CGLIATLVLYR+ Sbjct: 377 RTAGFSLAYSLATALFGGFTPAIATGLIEMTGDKGAPGLWMTTAAICGLIATLVLYRRN 435 >ref|YP_002942648.1| general substrate transporter [Variovorax paradoxus S110] gb|ACS17382.1| General substrate transporter [Variovorax paradoxus S110] Length = 454 Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust. Identities = 340/423 (80%), Positives = 382/423 (90%), Gaps = 5/423 (1%) Query: 11 KFATVLRVTSGNFMEMFDFFLFGFYASYISKAFFPSGDEFASLMLTFMTFGAGFLMRPLG 70 KFATVLRVT GNFMEMFDFFLFGFYA+ ISKAFFP+G+EFASLMLTFMTFGAGFLMRPLG Sbjct: 32 KFATVLRVTGGNFMEMFDFFLFGFYATQISKAFFPAGNEFASLMLTFMTFGAGFLMRPLG 91 Query: 71 AIILGAYVDRVGRRQGLIVTLALMALGTVLIAFVPGYATIGLLAPALVLIGRLLQGFSAG 130 AI LGAYVDRVGRR+GLI TLALMA+GT+LIA VP YATIG AP LVL+GRLLQGFSAG Sbjct: 92 AIFLGAYVDRVGRRKGLIATLALMAVGTLLIACVPSYATIGFAAPLLVLVGRLLQGFSAG 151 Query: 131 VELGGVSVYLAEMATPGRKGFYVSWQSASQQVAIIFAAAIGYGLNIWLTKDQVGDWGWRV 190 VELGGVSVYL+EMATPGRKGFYVSWQSASQQVAII AAA+GY LN+ + ++GD+ WR+ Sbjct: 152 VELGGVSVYLSEMATPGRKGFYVSWQSASQQVAIIVAAALGYWLNVTFSPQEIGDFYWRI 211 Query: 191 PFFIGCMIVPVLFVIRRSLQETEEFLARKRKPNLNEIFRSMVENWKLVIAGMMLVSMTTV 250 PFF+GC+IVPVLF+IRRSLQETEEF+ARK +P+ EIF+SMV NW LV+AGMMLVSMTTV Sbjct: 212 PFFVGCLIVPVLFIIRRSLQETEEFMARKHRPDAREIFQSMVANWALVVAGMMLVSMTTV 271 Query: 251 SFYLITVYTPTFGKNVLKLSTESALIVTFCVGISNFIWLPVMGALSDRIGRRPLLLVFTI 310 SFYLITVYTPTFGK+VL LST AL+VT CV ISNFIWLPVMGALSDR+GR+PLL++FT+ Sbjct: 272 SFYLITVYTPTFGKSVLHLSTTDALVVTLCVAISNFIWLPVMGALSDRVGRKPLLILFTV 331 Query: 311 LTILTAYPAMTWLVGDATFGKMLVVELWLSFLYASYNGAMVVALTEVMPVDVRTAGFSLA 370 LTILTAYP++ WLVG +FG+ML VELWLSFLYASYNGAMVVALTEVMPV+VRTAGFSLA Sbjct: 332 LTILTAYPSLKWLVGAPSFGRMLEVELWLSFLYASYNGAMVVALTEVMPVNVRTAGFSLA 391 Query: 371 YSLATAVFGGFTPAIATGLIEITHDKAAPGLWMSFAAVCGLIATLVLYRKK-----SLAV 425 YSLATA+FGGFTPAIATGLIE+T DK APGLWM+ AA CGL+ATLVLYR+ S+ V Sbjct: 392 YSLATALFGGFTPAIATGLIEMTGDKGAPGLWMTAAAACGLVATLVLYRRNVDPADSVRV 451 Query: 426 PLV 428 P+V Sbjct: 452 PVV 454