BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0041.p (290 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775932.1| nitrate/sulfonate/bicarbonate ABC transporte... 479 e-133 ref|YP_001242494.1| putative ABC transporter [Bradyrhizobium sp.... 402 e-110 ref|YP_002495409.1| binding-protein-dependent transport systems ... 395 e-108 ref|YP_001767077.1| binding-protein-dependent transport systems ... 392 e-107 ref|YP_001524867.1| nitrate/sulfonate/bicarbonate ABC transporte... 388 e-106 >ref|YP_003775932.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ64024.1| ABC-type nitrate/sulfonate/bicarbonate transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 289 Score = 479 bits (1232), Expect = e-133, Method: Compositional matrix adjust. Identities = 247/283 (87%), Positives = 269/283 (95%) Query: 8 FVRPEIIVEPNRNAVAEVQRPLSAFEAIYRISWIRKTAILLVLALVWEIYGRWLDNSLLF 67 FVRPEI+V+PN +A AEVQRPLSAFE++YR+ W+RKT ILLVLA +WE+YGRWLDN+LLF Sbjct: 7 FVRPEILVDPNPHATAEVQRPLSAFESLYRMGWLRKTVILLVLAAIWEVYGRWLDNALLF 66 Query: 68 PSFSETLHAFMSGISSGVLLQRAAVSLQTLLIGYSLGILLAGLLTTLAISSRIGNDFLET 127 PSFSET+ AF+SGI SGVLLQRAAVS+QTLL+GY LGILLAGLLTT+AISSRIGND LET Sbjct: 67 PSFSETVQAFLSGIGSGVLLQRAAVSMQTLLVGYGLGILLAGLLTTVAISSRIGNDLLET 126 Query: 128 LTSMFNPLPAIALLPLALIWFGLGTGSIIFVLVHSVLWAVALNTHAGFRSVSATMRMVGQ 187 LTSMFNPLPAIALLPLALIWFGLGTGSIIFVLVHSVLWAVALNTH GFR+VS T+RMVGQ Sbjct: 127 LTSMFNPLPAIALLPLALIWFGLGTGSIIFVLVHSVLWAVALNTHGGFRAVSNTLRMVGQ 186 Query: 188 NYGLRRFALVRYILIPAAFPSILTGLKIGWAFAWRTLIAAELVFGVSSGTGGLGWYIFEN 247 NYGLRRF+LV+ ILIPAAFPSILTGLK+GWAFAWRTLIAAELVFGVSSG GGLGWYIFEN Sbjct: 187 NYGLRRFSLVKSILIPAAFPSILTGLKVGWAFAWRTLIAAELVFGVSSGAGGLGWYIFEN 246 Query: 248 RNQLETANVFSGLFFVIIIGLFVENMIFAKIEKRTIRRWGMQH 290 RNQLETANVFSGLFFVIIIGL VEN+IFA+IEKRTIRRWGMQH Sbjct: 247 RNQLETANVFSGLFFVIIIGLVVENLIFAQIEKRTIRRWGMQH 289 >ref|YP_001242494.1| putative ABC transporter [Bradyrhizobium sp. BTAi1] gb|ABQ38588.1| putative ABC transporter [Bradyrhizobium sp. BTAi1] Length = 288 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 201/287 (70%), Positives = 235/287 (81%) Query: 4 NSTLFVRPEIIVEPNRNAVAEVQRPLSAFEAIYRISWIRKTAILLVLALVWEIYGRWLDN 63 + TL +RPEI+ +V+ LS E IY ++ +RK IL+ LA +W+ YG WL N Sbjct: 2 SETLALRPEIVNAETPLGDVKVEASLSIIERIYHVAGVRKAVILVALAALWQAYGLWLGN 61 Query: 64 SLLFPSFSETLHAFMSGISSGVLLQRAAVSLQTLLIGYSLGILLAGLLTTLAISSRIGND 123 LLFP+F++TL AF I++GV+ R VSL+TLLIGY +GI LA +LTT+AI SRIG D Sbjct: 62 PLLFPTFTDTLSAFFENIANGVIPARTLVSLETLLIGYGIGIALAAVLTTIAIGSRIGAD 121 Query: 124 FLETLTSMFNPLPAIALLPLALIWFGLGTGSIIFVLVHSVLWAVALNTHAGFRSVSATMR 183 LE LTSMFNPLPAIALLPLALIWFGLG GSIIFVLVHSVLWA+ALNTH+GFRSVS T+R Sbjct: 122 MLEALTSMFNPLPAIALLPLALIWFGLGKGSIIFVLVHSVLWAIALNTHSGFRSVSNTLR 181 Query: 184 MVGQNYGLRRFALVRYILIPAAFPSILTGLKIGWAFAWRTLIAAELVFGVSSGTGGLGWY 243 MVG NYGLR LVR+ILIPAAFP+ILTGLK+GWAFAWRTLIAAELVFGVSSG GGLGW+ Sbjct: 182 MVGLNYGLRGLKLVRFILIPAAFPAILTGLKVGWAFAWRTLIAAELVFGVSSGAGGLGWF 241 Query: 244 IFENRNQLETANVFSGLFFVIIIGLFVENMIFAKIEKRTIRRWGMQH 290 IFENRNQLETANVF+GLF VI IGL VEN++FA IE++T+RRWGMQH Sbjct: 242 IFENRNQLETANVFAGLFTVIFIGLVVENVVFATIERKTVRRWGMQH 288 >ref|YP_002495409.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium nodulans ORS 2060] gb|ACL55106.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium nodulans ORS 2060] Length = 292 Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 211/292 (72%), Positives = 242/292 (82%), Gaps = 2/292 (0%) Query: 1 MTKNSTLFV--RPEIIVEPNRNAVAEVQRPLSAFEAIYRISWIRKTAILLVLALVWEIYG 58 MT STL + RPEI+ E + V++ LS E +YR W+RK A+L LA++WE+YG Sbjct: 1 MTTASTLGLDRRPEILRETSAAGAITVEQRLSLPELLYRQGWLRKCAVLATLAVLWEVYG 60 Query: 59 RWLDNSLLFPSFSETLHAFMSGISSGVLLQRAAVSLQTLLIGYSLGILLAGLLTTLAISS 118 RWLDN LLFP+FS T+ AF + I SG + +A +SLQTL IGY +GI LA +LTT+AI S Sbjct: 61 RWLDNPLLFPTFSATVEAFGTAILSGEIPAKALISLQTLAIGYGIGIALAAILTTIAIGS 120 Query: 119 RIGNDFLETLTSMFNPLPAIALLPLALIWFGLGTGSIIFVLVHSVLWAVALNTHAGFRSV 178 RIG D LETLT+MFNPLPAIALLPLALIWFGLG GS++FVLVHSVLWA+ALNTHAGFRSV Sbjct: 121 RIGTDLLETLTAMFNPLPAIALLPLALIWFGLGQGSVVFVLVHSVLWAIALNTHAGFRSV 180 Query: 179 SATMRMVGQNYGLRRFALVRYILIPAAFPSILTGLKIGWAFAWRTLIAAELVFGVSSGTG 238 S T+RMVG NYGLR LVR ILIPAAFPSILTGLK+GWAFAWRTLIAAELVFGVSSG+G Sbjct: 181 SNTLRMVGLNYGLRNLRLVRAILIPAAFPSILTGLKVGWAFAWRTLIAAELVFGVSSGSG 240 Query: 239 GLGWYIFENRNQLETANVFSGLFFVIIIGLFVENMIFAKIEKRTIRRWGMQH 290 GLGWYIFENRN LET NVF+GLF VI+IGLFVEN++FA IEKRTIRRWGMQH Sbjct: 241 GLGWYIFENRNALETTNVFAGLFTVILIGLFVENVVFANIEKRTIRRWGMQH 292 >ref|YP_001767077.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] gb|ACA14643.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] Length = 292 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 209/292 (71%), Positives = 243/292 (83%), Gaps = 2/292 (0%) Query: 1 MTKNSTLFV--RPEIIVEPNRNAVAEVQRPLSAFEAIYRISWIRKTAILLVLALVWEIYG 58 M+ STL + RP+I+ E + + V++ LS E +YR W+RK +L LA++WE+YG Sbjct: 1 MSTVSTLGLDQRPDIVRETSASGAVAVEQRLSLPELLYRQGWLRKCVVLAALAILWEVYG 60 Query: 59 RWLDNSLLFPSFSETLHAFMSGISSGVLLQRAAVSLQTLLIGYSLGILLAGLLTTLAISS 118 RWLDN LLFP+F T+ AF S I SG + ++A +SL+TL IGY +GI LA LLTT+AI S Sbjct: 61 RWLDNPLLFPTFGATVEAFGSAILSGEIPRKALISLETLAIGYGIGIGLAALLTTIAIGS 120 Query: 119 RIGNDFLETLTSMFNPLPAIALLPLALIWFGLGTGSIIFVLVHSVLWAVALNTHAGFRSV 178 RIG D LETLT+MFNPLPAIALLPLALIWFGLG GS++FVLVHSVLWA+ALNTHAGFRSV Sbjct: 121 RIGTDLLETLTAMFNPLPAIALLPLALIWFGLGQGSVVFVLVHSVLWAIALNTHAGFRSV 180 Query: 179 SATMRMVGQNYGLRRFALVRYILIPAAFPSILTGLKIGWAFAWRTLIAAELVFGVSSGTG 238 S T+RMVG NYGLR +LVR ILIPAAFPSILTGLK+GWAFAWRTLIAAELVFGVSSG+G Sbjct: 181 SNTLRMVGLNYGLRNLSLVRAILIPAAFPSILTGLKVGWAFAWRTLIAAELVFGVSSGSG 240 Query: 239 GLGWYIFENRNQLETANVFSGLFFVIIIGLFVENMIFAKIEKRTIRRWGMQH 290 GLGWYIFENRN LET NVF+GLF VI+IGLFVEN+IFA IEKRTIRRWGMQH Sbjct: 241 GLGWYIFENRNALETTNVFAGLFTVILIGLFVENVIFANIEKRTIRRWGMQH 292 >ref|YP_001524867.1| nitrate/sulfonate/bicarbonate ABC transporter permease [Azorhizobium caulinodans ORS 571] dbj|BAF87949.1| putative ABC-type nitrate/sulfonate/bicarbonate transport system permease component [Azorhizobium caulinodans ORS 571] Length = 288 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 208/287 (72%), Positives = 238/287 (82%) Query: 4 NSTLFVRPEIIVEPNRNAVAEVQRPLSAFEAIYRISWIRKTAILLVLALVWEIYGRWLDN 63 + TL +RPEII +V+ LS FE IY I +RK ILLVLA +WE YGRWL N Sbjct: 2 SETLLLRPEIIKPDTTAGDVQVEASLSWFERIYGIGAVRKAFILLVLAGLWEAYGRWLGN 61 Query: 64 SLLFPSFSETLHAFMSGISSGVLLQRAAVSLQTLLIGYSLGILLAGLLTTLAISSRIGND 123 LLFP+F+ETL A + I++GV+ QR VSLQTLLIGY +GI+LA +LTTLAI SR+G D Sbjct: 62 PLLFPTFTETLTALIDNIANGVIPQRVLVSLQTLLIGYGIGIVLAAILTTLAIGSRLGAD 121 Query: 124 FLETLTSMFNPLPAIALLPLALIWFGLGTGSIIFVLVHSVLWAVALNTHAGFRSVSATMR 183 LE LTSMFNPLPAIALLPLALIWFGLG GS+IFVLVHSVLWA+ALNTH+GFRSVS TMR Sbjct: 122 LLEALTSMFNPLPAIALLPLALIWFGLGQGSVIFVLVHSVLWAIALNTHSGFRSVSNTMR 181 Query: 184 MVGQNYGLRRFALVRYILIPAAFPSILTGLKIGWAFAWRTLIAAELVFGVSSGTGGLGWY 243 MVG NYGLR LVR ILIPAAFP+ILTGLK+GWAFAWRTLIAAELVFGVSSG+GGLGW+ Sbjct: 182 MVGMNYGLRGLKLVRLILIPAAFPAILTGLKVGWAFAWRTLIAAELVFGVSSGSGGLGWF 241 Query: 244 IFENRNQLETANVFSGLFFVIIIGLFVENMIFAKIEKRTIRRWGMQH 290 IFENRNQLET+NVF+GL VI+IGL VEN+ FA IE++T+RRWGMQH Sbjct: 242 IFENRNQLETSNVFAGLLTVILIGLIVENVGFATIERKTVRRWGMQH 288