BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0040.p (267 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775933.1| nitrate/sulfonate/bicarbonate ABC transporte... 474 e-132 ref|YP_001767078.1| ABC transporter-like protein [Methylobacteri... 423 e-116 ref|YP_002495410.1| ABC transporter-like protein [Methylobacteri... 422 e-116 ref|YP_001524868.1| ABC transporter ATP-binding protein [Azorhiz... 422 e-116 ref|YP_001203539.1| putative ABC transporter (ATP binding subuni... 413 e-113 >ref|YP_003775933.1| nitrate/sulfonate/bicarbonate ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ64025.1| ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 263 Score = 474 bits (1220), Expect = e-132, Method: Compositional matrix adjust. Identities = 225/254 (88%), Positives = 238/254 (93%) Query: 14 TPVDPSAPLLEIDNVTLQYKTSDSLVTATQQVSFNVHPSDRYILLGPSGCGKSTLLKAIG 73 + +DPS PLLEID VTLQYKT+DSLVTATQ VSFNVHP DRYILLGPSGCGKSTLLKAIG Sbjct: 9 SSIDPSRPLLEIDRVTLQYKTTDSLVTATQSVSFNVHPGDRYILLGPSGCGKSTLLKAIG 68 Query: 74 GYLQPTSGKIRLKGREVTQPGSDRMMVFQEFDQLLPWKTVRQNVEFALHASGRLQGKEAS 133 GYLQPTSG IRLKGREV +PG DRMMVFQEFDQLLPWKTVRQNVEFALHASGRLQG+ A+ Sbjct: 69 GYLQPTSGAIRLKGREVHEPGPDRMMVFQEFDQLLPWKTVRQNVEFALHASGRLQGRAAA 128 Query: 134 DRAAYYIEKVGLAKFIDSYPHTLSGGMKQRVSIARGMAMEPDVLLMDEPFAALDALTRRK 193 +RA YYI KVGLAKFIDSYPH LSGGMKQRVSIARGMAMEPDVLLMDEPFAALDALTRRK Sbjct: 129 ERAEYYISKVGLAKFIDSYPHMLSGGMKQRVSIARGMAMEPDVLLMDEPFAALDALTRRK 188 Query: 194 MQDELLRLWDDTNFTVLFVTHSIEEAIRIGTRILLLSPHPGQVRAELNSIPPEEMGTASQ 253 MQDELLRLWDDT FTVLFVTHSIEEAIR+GTRILLL+PHPGQVRAELNSI P ++GTA+Q Sbjct: 189 MQDELLRLWDDTQFTVLFVTHSIEEAIRVGTRILLLTPHPGQVRAELNSIDPSQLGTAAQ 248 Query: 254 AQLEQRINDMLFAH 267 A+LE RINDMLFAH Sbjct: 249 AELETRINDMLFAH 262 >ref|YP_001767078.1| ABC transporter-like protein [Methylobacterium sp. 4-46] gb|ACA14644.1| ABC transporter related [Methylobacterium sp. 4-46] Length = 256 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 202/246 (82%), Positives = 217/246 (88%) Query: 21 PLLEIDNVTLQYKTSDSLVTATQQVSFNVHPSDRYILLGPSGCGKSTLLKAIGGYLQPTS 80 PLL + VTLQYKT+D LVTAT +V F V P DRYILLGPSGCGKSTLLKAIGGYL P Sbjct: 11 PLLTVQGVTLQYKTTDHLVTATYRVDFEVLPGDRYILLGPSGCGKSTLLKAIGGYLTPVE 70 Query: 81 GKIRLKGREVTQPGSDRMMVFQEFDQLLPWKTVRQNVEFALHASGRLQGKEASDRAAYYI 140 G+IRLKGR VT+PG DRMMVFQEFDQLLPWKTVRQNV FAL ASGR G EA+DRA YI Sbjct: 71 GEIRLKGRRVTEPGPDRMMVFQEFDQLLPWKTVRQNVAFALTASGRAAGAEANDRAMAYI 130 Query: 141 EKVGLAKFIDSYPHTLSGGMKQRVSIARGMAMEPDVLLMDEPFAALDALTRRKMQDELLR 200 EKVGLAKF DSYPH LSGGMKQRV+IARGMAMEPD+LLMDEPFAALDALTRRKMQDELLR Sbjct: 131 EKVGLAKFADSYPHMLSGGMKQRVAIARGMAMEPDILLMDEPFAALDALTRRKMQDELLR 190 Query: 201 LWDDTNFTVLFVTHSIEEAIRIGTRILLLSPHPGQVRAELNSIPPEEMGTASQAQLEQRI 260 LW+DT FTVLFVTHSIEEAI++GTRILLLSPHPGQV+AELNS+ P E+GTA+Q LE RI Sbjct: 191 LWEDTRFTVLFVTHSIEEAIKVGTRILLLSPHPGQVKAELNSLAPAELGTAAQGALEARI 250 Query: 261 NDMLFA 266 NDMLFA Sbjct: 251 NDMLFA 256 >ref|YP_002495410.1| ABC transporter-like protein [Methylobacterium nodulans ORS 2060] gb|ACL55107.1| ABC transporter related [Methylobacterium nodulans ORS 2060] Length = 256 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 202/246 (82%), Positives = 217/246 (88%) Query: 21 PLLEIDNVTLQYKTSDSLVTATQQVSFNVHPSDRYILLGPSGCGKSTLLKAIGGYLQPTS 80 PLL + VTLQYKTSD LVTAT +V F V P DRYILLGPSGCGKSTLLKAIGGYL P Sbjct: 11 PLLSVQGVTLQYKTSDHLVTATYRVDFEVLPGDRYILLGPSGCGKSTLLKAIGGYLTPVE 70 Query: 81 GKIRLKGREVTQPGSDRMMVFQEFDQLLPWKTVRQNVEFALHASGRLQGKEASDRAAYYI 140 G+IRLKGR+V++PG DRMMVFQEFDQLLPWKTV+QNV FAL ASGR G EA DRA YI Sbjct: 71 GEIRLKGRKVSEPGPDRMMVFQEFDQLLPWKTVKQNVAFALTASGRASGPEAMDRAMAYI 130 Query: 141 EKVGLAKFIDSYPHTLSGGMKQRVSIARGMAMEPDVLLMDEPFAALDALTRRKMQDELLR 200 EKVGLAKF DSYPH LSGGMKQRV+IARGMAMEPD+LLMDEPFAALDALTRRKMQDELLR Sbjct: 131 EKVGLAKFADSYPHMLSGGMKQRVAIARGMAMEPDILLMDEPFAALDALTRRKMQDELLR 190 Query: 201 LWDDTNFTVLFVTHSIEEAIRIGTRILLLSPHPGQVRAELNSIPPEEMGTASQAQLEQRI 260 LW+DT FTVLFVTHSIEEAI++GTRILLLSPHPGQVRAELNS+ P E+GTA+Q LE RI Sbjct: 191 LWEDTRFTVLFVTHSIEEAIKVGTRILLLSPHPGQVRAELNSLAPSELGTAAQGALEARI 250 Query: 261 NDMLFA 266 NDMLFA Sbjct: 251 NDMLFA 256 >ref|YP_001524868.1| ABC transporter ATP-binding protein [Azorhizobium caulinodans ORS 571] dbj|BAF87950.1| ABC transporter ATP-binding protein [Azorhizobium caulinodans ORS 571] Length = 287 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 203/253 (80%), Positives = 223/253 (88%) Query: 15 PVDPSAPLLEIDNVTLQYKTSDSLVTATQQVSFNVHPSDRYILLGPSGCGKSTLLKAIGG 74 P APLL ++ VTLQYKT SLVTAT +V F+V+ SDR++LLGPSGCGKSTLLKAIGG Sbjct: 35 PQSIGAPLLSVEGVTLQYKTPGSLVTATYRVDFDVYDSDRFVLLGPSGCGKSTLLKAIGG 94 Query: 75 YLQPTSGKIRLKGREVTQPGSDRMMVFQEFDQLLPWKTVRQNVEFALHASGRLQGKEASD 134 YL+PT GKIRLKG EV +PG DRMMVFQEFDQLLPWKTVR+NV FAL ASGRL+G EA + Sbjct: 95 YLRPTEGKIRLKGHEVKEPGPDRMMVFQEFDQLLPWKTVRENVVFALTASGRLEGAEAQE 154 Query: 135 RAAYYIEKVGLAKFIDSYPHTLSGGMKQRVSIARGMAMEPDVLLMDEPFAALDALTRRKM 194 RAA YI+KVGL KFIDSYPH LSGGMKQRV+IARGMAMEPDVLLMDEPFAALDALTRRKM Sbjct: 155 RAAAYIDKVGLTKFIDSYPHMLSGGMKQRVAIARGMAMEPDVLLMDEPFAALDALTRRKM 214 Query: 195 QDELLRLWDDTNFTVLFVTHSIEEAIRIGTRILLLSPHPGQVRAELNSIPPEEMGTASQA 254 QDELL+LW+DT FTVLFVTHSIEEAI+IGTRILLLSPHPG+VRAELNS+P E MGT + Sbjct: 215 QDELLQLWEDTRFTVLFVTHSIEEAIKIGTRILLLSPHPGRVRAELNSVPAEAMGTPAAV 274 Query: 255 QLEQRINDMLFAH 267 QLE RINDMLF H Sbjct: 275 QLETRINDMLFGH 287 >ref|YP_001203539.1| putative ABC transporter (ATP binding subunit) [Bradyrhizobium sp. ORS 278] emb|CAL75302.1| putative ABC transporter (ATP binding subunit) [Bradyrhizobium sp. ORS 278] Length = 264 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 197/247 (79%), Positives = 216/247 (87%) Query: 21 PLLEIDNVTLQYKTSDSLVTATQQVSFNVHPSDRYILLGPSGCGKSTLLKAIGGYLQPTS 80 PLL ++ VTLQYKT D+LVTAT +V F V SDR++LLGPSGCGKSTLLKAIGGYL+PT Sbjct: 17 PLLSVEGVTLQYKTPDTLVTATYRVDFKVFDSDRFVLLGPSGCGKSTLLKAIGGYLKPTE 76 Query: 81 GKIRLKGREVTQPGSDRMMVFQEFDQLLPWKTVRQNVEFALHASGRLQGKEASDRAAYYI 140 G+IRLKG EVT+PG DRMMVFQEFDQLLPWKTVR+NV FAL ASGRL EA +RA YI Sbjct: 77 GRIRLKGHEVTEPGPDRMMVFQEFDQLLPWKTVRENVVFALTASGRLSAAEAQERAKSYI 136 Query: 141 EKVGLAKFIDSYPHTLSGGMKQRVSIARGMAMEPDVLLMDEPFAALDALTRRKMQDELLR 200 +KVGL KFIDSYPH LSGGMKQRV+IARGMAMEPDVLLMDEPFAALDALTRRKMQDELL+ Sbjct: 137 DKVGLTKFIDSYPHMLSGGMKQRVAIARGMAMEPDVLLMDEPFAALDALTRRKMQDELLQ 196 Query: 201 LWDDTNFTVLFVTHSIEEAIRIGTRILLLSPHPGQVRAELNSIPPEEMGTASQAQLEQRI 260 LW DT FTVLFVTHSIEEAI+IG+RILLLSPHPG+VRAELNS+PP MG+ Q LE RI Sbjct: 197 LWQDTRFTVLFVTHSIEEAIKIGSRILLLSPHPGRVRAELNSVPPGTMGSPEQVALEGRI 256 Query: 261 NDMLFAH 267 NDMLF H Sbjct: 257 NDMLFGH 263