BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0038.p (214 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775935.1| transmembrane sensor histidine kinase transc... 261 3e-68 ref|YP_001242497.1| putative two-component system histidine kina... 123 2e-26 ref|YP_002495412.1| histidine kinase [Methylobacterium nodulans ... 122 4e-26 ref|YP_001203537.1| putative two-component system histidine kina... 122 5e-26 ref|YP_001524870.1| ATP-binding protein [Azorhizobium caulinodan... 113 2e-23 >ref|YP_003775935.1| transmembrane sensor histidine kinase transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ64027.1| transmembrane sensor histidine kinase transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 468 Score = 261 bits (668), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 123/163 (75%), Positives = 140/163 (85%) Query: 2 IVAGRSLYTRLVMRVGIVLAISSAVLLIAIWISTQLAANEAYDRILSGSALQIAENTWYQ 61 ++AGRSLYTRLV+RVG VL +S+A LLIAIWISTQ AA EAYDRIL+GSALQIAENTWY Sbjct: 8 VIAGRSLYTRLVIRVGAVLLVSAAALLIAIWISTQFAAREAYDRILAGSALQIAENTWYD 67 Query: 62 NGAVNVDVPLAAFSMLTAGDQVFYVVIDPDGRTVAGDPDFKPEIPWNKLEEGPLLQDGAY 121 +G VNVDVPLAA SML GD Y V DP GR +AGD +F+PEIPW +LE+GPLL+DG Y Sbjct: 68 HGEVNVDVPLAALSMLGTGDHAIYAVFDPRGRVIAGDAEFRPEIPWQELEQGPLLRDGQY 127 Query: 122 LDTPVRMAVIGRRMPVAGAHPWAVIVLAQTNNARMSFAKSVGT 164 L TPVRMA+IGRRMPV G HPWAVIVLAQTNNARMSFA+S+G+ Sbjct: 128 LGTPVRMAIIGRRMPVEGPHPWAVIVLAQTNNARMSFAQSLGS 170 >ref|YP_001242497.1| putative two-component system histidine kinase [Bradyrhizobium sp. BTAi1] gb|ABQ38591.1| putative Two-component system histidine kinase [Bradyrhizobium sp. BTAi1] Length = 462 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 72/152 (47%), Positives = 93/152 (61%) Query: 7 SLYTRLVMRVGIVLAISSAVLLIAIWISTQLAANEAYDRILSGSALQIAENTWYQNGAVN 66 SL RL++ +G +L + + VL +A W AA +AYDR+L+G A+QIAEN + Q G V Sbjct: 13 SLRARLLIAIGAILTVGAIVLSLAAWQYAATAARDAYDRLLAGGAVQIAENIYMQGGVVT 72 Query: 67 VDVPLAAFSMLTAGDQVFYVVIDPDGRTVAGDPDFKPEIPWNKLEEGPLLQDGAYLDTPV 126 +D P AAF+ L+A D VFY V DP G VAG D P L EG +L+DG Y D PV Sbjct: 73 LDPPAAAFATLSAYDLVFYRVTDPRGVVVAGYDDLAISAPAAALREGVVLRDGVYRDQPV 132 Query: 127 RMAVIGRRMPVAGAHPWAVIVLAQTNNARMSF 158 R+A + RR+ A W+ IVLAQT AR S Sbjct: 133 RIAAVARRLDGAPGDGWSAIVLAQTLRARDSL 164 >ref|YP_002495412.1| histidine kinase [Methylobacterium nodulans ORS 2060] gb|ACL55109.1| histidine kinase [Methylobacterium nodulans ORS 2060] Length = 461 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 70/162 (43%), Positives = 96/162 (59%), Gaps = 3/162 (1%) Query: 7 SLYTRLVMRVGIVLAISSAVLLIAIWISTQLAANEAYDRILSGSALQIAENTWYQNGAVN 66 SL+ RLV +G+VLA+ +A+LL A W S +LAA++AYDR+L G+ALQIAE + Sbjct: 7 SLFLRLVTVLGLVLAVGAALLLGAAWTSARLAADQAYDRLLVGAALQIAETIASDGREIT 66 Query: 67 VDVPLAAFSMLTAG--DQVFYVVIDPDGRTVAGDPDFKPEIPWNKLEEGPLLQDGAYLDT 124 VD P +AF L D++FY V+DP + G PD + +L +GPLL D + Sbjct: 67 VDPPFSAFETLGLAPRDRIFYKVVDPSDGLLTGSPDLAVPVDRARLGDGPLLLDATHRGE 126 Query: 125 PVRMAVIGRRMPVAGAHPWAVIVLAQTNNARMSFAKSVGTAK 166 PVR+ V GR +P WA +V+AQT AR A + TAK Sbjct: 127 PVRVVVAGRYVPDIPKAGWAAVVVAQTREARNGLAGDL-TAK 167 >ref|YP_001203537.1| putative two-component system histidine kinase [Bradyrhizobium sp. ORS 278] emb|CAL75300.1| putative Two-component system histidine kinase [Bradyrhizobium sp. ORS 278] Length = 468 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 69/149 (46%), Positives = 95/149 (63%) Query: 7 SLYTRLVMRVGIVLAISSAVLLIAIWISTQLAANEAYDRILSGSALQIAENTWYQNGAVN 66 SL RL++ +G +LA+ + VL +A W AA +AYD++L+G A+Q+AEN + Q G V Sbjct: 13 SLRARLLIAIGAILAVGAVVLSLAAWQYAATAARDAYDKLLAGGAVQVAENIYMQGGVVT 72 Query: 67 VDVPLAAFSMLTAGDQVFYVVIDPDGRTVAGDPDFKPEIPWNKLEEGPLLQDGAYLDTPV 126 +D P AAF+ L+A D VFY V DP G VAG D + P + L +G +L+DG Y D PV Sbjct: 73 LDPPAAAFATLSAYDLVFYRVTDPRGVVVAGYDDLAIQAPKSALRDGVVLRDGVYRDQPV 132 Query: 127 RMAVIGRRMPVAGAHPWAVIVLAQTNNAR 155 R+A + RR+ A W+ IVLAQT AR Sbjct: 133 RIAAVARRLDGAPGEGWSEIVLAQTVRAR 161 >ref|YP_001524870.1| ATP-binding protein [Azorhizobium caulinodans ORS 571] dbj|BAF87952.1| ATP-binding protein [Azorhizobium caulinodans ORS 571] Length = 436 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 66/149 (44%), Positives = 90/149 (60%), Gaps = 1/149 (0%) Query: 19 VLAISSAVLLIAIWISTQLAANEAYDRILSGSALQIAENTWYQNGAVNVDVPLAAFSMLT 78 +LA+ + +L A W ++AA +AYD++L G A+QIAEN + Q G V +D P AAFS L+ Sbjct: 1 MLALGALLLSFAAWEYAKVAARDAYDKLLIGGAVQIAENVYVQGGVVALDPPAAAFSTLS 60 Query: 79 AGDQVFYVVIDPDGRTVAGDPDFKPEIPWNKLEEGPLLQDGAYLDTPVRMAVIGRRMPVA 138 A D VFY V DP G VAG D + L G +L+DG Y PVR+A +G+++ A Sbjct: 61 AYDLVFYRVTDPRGVVVAGYDDLAKGVGGAALHRGVVLRDGTYQGQPVRIAALGKQLEDA 120 Query: 139 GAHPWAVIVLAQTNNARMSFAKSVGTAKI 167 G WA IVLAQT AR + A + T + Sbjct: 121 GGG-WAEIVLAQTMRAREALAWDLTTKAV 148