BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0037.p (370 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001888479.1| family 3 extracellular solute-binding protei... 338 8e-91 ref|YP_003910166.1| extracellular solute-binding protein family ... 277 2e-72 ref|ZP_02882944.1| extracellular solute-binding protein family 3... 274 1e-71 ref|ZP_04948559.1| ABC-type amino acid transport/signal transduc... 273 5e-71 ref|YP_001862937.1| extracellular solute-binding protein [Burkho... 271 9e-71 >ref|YP_001888479.1| family 3 extracellular solute-binding protein [Burkholderia phytofirmans PsJN] gb|ACD19109.1| extracellular solute-binding protein family 3 [Burkholderia phytofirmans PsJN] Length = 277 Score = 338 bits (867), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 179/244 (73%), Positives = 198/244 (81%), Gaps = 7/244 (2%) Query: 54 AALFAPGGTLRASINLGNPVLASVDPNTGKPVGVSVDLAAELARRLGVPLQLVAVKSAGA 113 AA+FAP GTLRASINLGNPVLA++DP TG+PVGVSVDLA ELA+RLGVPLQLVAV SAGA Sbjct: 40 AAVFAPSGTLRASINLGNPVLAALDPATGQPVGVSVDLATELAKRLGVPLQLVAVNSAGA 99 Query: 114 SVENIEQDKADIGFFAVDPKRAQEISFTGPYVLIEGYYAVRADSPITTNTQVDQPGITVA 173 SVEN+EQ KADIGFFAVDPKR QEI+FT PYVLIEG+Y VR SPITTN QVDQ G+TVA Sbjct: 100 SVENVEQGKADIGFFAVDPKRGQEIAFTKPYVLIEGFYLVRDGSPITTNEQVDQAGVTVA 159 Query: 174 VGNGSAYDLFLTRELKSATIVRIPTSPAVVQGFLDQNLSVAAGVKQQLEHDAAKAGGLRI 233 VG GSAYDLFLTREL AT+VRIPTSPAVVQGFLDQ+L VAAGVKQQLE DAA GLRI Sbjct: 160 VGKGSAYDLFLTRELHHATLVRIPTSPAVVQGFLDQHLDVAAGVKQQLEKDAAGKNGLRI 219 Query: 234 LGQRFMVIRQAMGVPKARGEAXAVRYPHGFRAHARAAGDPGDGSADAGRRHVHAVPGAVA 293 L QRFMVIRQAMGVPKA+G+ A Y F +A+G +A R H + GAV Sbjct: 220 LDQRFMVIRQAMGVPKAKGD-DAAAYLSKFVEDMKASGFV---TASLAR---HQIAGAVV 272 Query: 294 AQEN 297 A+E+ Sbjct: 273 AKES 276 >ref|YP_003910166.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] gb|ADN60875.1| extracellular solute-binding protein family 3 [Burkholderia sp. CCGE1003] Length = 260 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 142/228 (62%), Positives = 171/228 (75%), Gaps = 5/228 (2%) Query: 57 FAPGGTLRASINLGNPVLASVDPNTGKPVGVSVDLAAELARRLGVPLQLVAVKSAGASVE 116 FAP G LRASINLGNP+LA+ DP TG+P GVSVDLA A +LGV L+LV +AG SV+ Sbjct: 23 FAPTGKLRASINLGNPILANKDPQTGEPFGVSVDLARAFAAKLGVELELVVFDTAGKSVQ 82 Query: 117 NIEQDKADIGFFAVDPKRAQEISFTGPYVLIEGYYAVRADSPITTNTQVDQPGITVAVGN 176 + +++AD GFFAVDP R + I+FT PYVLIEG+Y VR DSP+ TN VDQP VAVG Sbjct: 83 AVSEERADFGFFAVDPLRGETIAFTAPYVLIEGFYLVRDDSPVRTNADVDQPHNRVAVGK 142 Query: 177 GSAYDLFLTRELKSATIVRIPTSPAVVQGFLDQNLSVAAGVKQQLEHDAAKAGGLRILGQ 236 GSAYDLFLTRELK+A IVR PTSP VV+ F++Q L VAAGVKQQLE DA + GLR+LG+ Sbjct: 143 GSAYDLFLTRELKAAQIVRAPTSPTVVKTFVEQGLEVAAGVKQQLEADARNSPGLRLLGE 202 Query: 237 RFMVIRQAMGVPKARGEAXAVRYPHGFRAHARAAGDPGDGSADAGRRH 284 RFMVI+QAMG PK+RGEA A + GF +A+G AD+ +RH Sbjct: 203 RFMVIQQAMGTPKSRGEAAAA-FLRGFVEEMKASG----FVADSLKRH 245 >ref|ZP_02882944.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] gb|EDT11228.1| extracellular solute-binding protein family 3 [Burkholderia graminis C4D1M] Length = 246 Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 136/200 (68%), Positives = 157/200 (78%) Query: 57 FAPGGTLRASINLGNPVLASVDPNTGKPVGVSVDLAAELARRLGVPLQLVAVKSAGASVE 116 F P G LRASINLGNP+LA+ DP TG+P GVSVDLA AR+LGV L+LV +AG SV+ Sbjct: 11 FTPTGKLRASINLGNPILANKDPQTGEPFGVSVDLARAFARQLGVELELVVFDAAGKSVQ 70 Query: 117 NIEQDKADIGFFAVDPKRAQEISFTGPYVLIEGYYAVRADSPITTNTQVDQPGITVAVGN 176 + +++AD GFFAVDP R + I+FT PYVLIEG+Y VR DSP+ TN VDQP VAVG Sbjct: 71 AVSEERADFGFFAVDPLRGETIAFTAPYVLIEGFYLVRDDSPVRTNADVDQPHNRVAVGK 130 Query: 177 GSAYDLFLTRELKSATIVRIPTSPAVVQGFLDQNLSVAAGVKQQLEHDAAKAGGLRILGQ 236 GSAYDLFLTRELK+A IVR PTSP VVQ FL+Q L VAAGVKQQLE DA A GLR+L + Sbjct: 131 GSAYDLFLTRELKAAQIVRAPTSPTVVQTFLEQGLEVAAGVKQQLEADARAASGLRLLDE 190 Query: 237 RFMVIRQAMGVPKARGEAXA 256 RFMVI+QAMG PK+RGEA A Sbjct: 191 RFMVIQQAMGTPKSRGEAAA 210 >ref|ZP_04948559.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] gb|EAY71730.1| ABC-type amino acid transport/signal transduction systems periplasmic component [Burkholderia dolosa AUO158] Length = 244 Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 141/228 (61%), Positives = 168/228 (73%), Gaps = 5/228 (2%) Query: 57 FAPGGTLRASINLGNPVLASVDPNTGKPVGVSVDLAAELARRLGVPLQLVAVKSAGASVE 116 F P G LRASINLGNP+LA+ DP TG+P GVS+DLA A RL V L+LV +AG SV+ Sbjct: 11 FTPTGKLRASINLGNPILANRDPATGEPFGVSIDLARAFAERLSVELELVVFDAAGKSVQ 70 Query: 117 NIEQDKADIGFFAVDPKRAQEISFTGPYVLIEGYYAVRADSPITTNTQVDQPGITVAVGN 176 + ++AD GFFA+DP R + ++FT PYVLIEG+Y VR DSPI +N VD+P VAVG Sbjct: 71 ALTDERADFGFFAIDPSRGETVAFTAPYVLIEGFYLVRDDSPIRSNDDVDRPDHRVAVGK 130 Query: 177 GSAYDLFLTRELKSATIVRIPTSPAVVQGFLDQNLSVAAGVKQQLEHDAAKAGGLRILGQ 236 GSAYDLFLTRELK+A IVR PTS AVVQ F++Q+L VAAGV+QQLE DAAK GLR+L + Sbjct: 131 GSAYDLFLTRELKAAQIVRAPTSQAVVQTFIEQDLEVAAGVRQQLESDAAKTPGLRLLDE 190 Query: 237 RFMVIRQAMGVPKARGEAXAVRYPHGFRAHARAAGDPGDGSADAGRRH 284 RFMVIRQAMGVPK+RGEA A F +A+G ADA RRH Sbjct: 191 RFMVIRQAMGVPKSRGEAAAAVLGE-FVEEMKASG----FVADALRRH 233 >ref|YP_001862937.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gb|ACC75891.1| extracellular solute-binding protein family 3 [Burkholderia phymatum STM815] Length = 244 Score = 271 bits (694), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 142/228 (62%), Positives = 168/228 (73%), Gaps = 5/228 (2%) Query: 57 FAPGGTLRASINLGNPVLASVDPNTGKPVGVSVDLAAELARRLGVPLQLVAVKSAGASVE 116 F P G +RASINLGNP+LA+ TG+P GVS+DLA A RLGV L+LV +AG SV+ Sbjct: 11 FTPTGKVRASINLGNPILANRHAETGEPFGVSIDLARAFAERLGVELELVVFDAAGKSVQ 70 Query: 117 NIEQDKADIGFFAVDPKRAQEISFTGPYVLIEGYYAVRADSPITTNTQVDQPGITVAVGN 176 I +++AD GFFA+DP R + I+FT PYVLIEG+Y VR DSP+ TN VDQP VAVG Sbjct: 71 AINEERADFGFFAIDPLRGEMITFTAPYVLIEGFYLVRDDSPVRTNADVDQPHNRVAVGK 130 Query: 177 GSAYDLFLTRELKSATIVRIPTSPAVVQGFLDQNLSVAAGVKQQLEHDAAKAGGLRILGQ 236 GSAYDL LTRELK+A IVR PTSPAVVQ FL+Q+L VAAGVKQQLE DA +AGGLR+L + Sbjct: 131 GSAYDLLLTRELKAAEIVRAPTSPAVVQTFLEQDLEVAAGVKQQLEADAQRAGGLRLLDE 190 Query: 237 RFMVIRQAMGVPKARGEAXAVRYPHGFRAHARAAGDPGDGSADAGRRH 284 RFMVI+QAMG PK+ GEA A H F +A+G ADA RRH Sbjct: 191 RFMVIQQAMGTPKSCGEAAAAAL-HAFVEEMKASG----FVADALRRH 233