BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0021.p (286 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775939.1| pirin-like protein [Herbaspirillum seropedic... 470 e-131 emb|CBJ39110.1| Conserved pirin-related protein [Ralstonia solan... 384 e-104 ref|NP_518662.1| pirin-like protein [Ralstonia solanacearum GMI1... 380 e-103 ref|YP_001898011.1| Pirin domain-containing protein [Ralstonia p... 375 e-102 ref|YP_003746700.1| hypothetical protein RCFBP_20935 [Ralstonia ... 375 e-102 >ref|YP_003775939.1| pirin-like protein [Herbaspirillum seropedicae SmR1] gb|ADJ64031.1| pirin-like protein [Herbaspirillum seropedicae SmR1] Length = 289 Score = 470 bits (1210), Expect = e-131, Method: Compositional matrix adjust. Identities = 232/290 (80%), Positives = 251/290 (86%), Gaps = 7/290 (2%) Query: 1 MST-TFTRQLERLVNGIPTQDGAGVSLTRVLTHDLQRRLDPFLMLDAFHSDKPDDYLAGF 59 MST +TRQ+ERLVNGIPTQDGAGVSLTRVLTHDLQRRLDPFLMLDAFHSD+P DYLAGF Sbjct: 3 MSTPLYTRQIERLVNGIPTQDGAGVSLTRVLTHDLQRRLDPFLMLDAFHSDEPSDYLAGF 62 Query: 60 PDHPHRGFETVTYMLQGRMRHRDNAGNEGLLEPGGMQWMTAGRGLVHSELPEQEDGLMSG 119 PDHPHRGFETVTYML GRMRHRDNAGNEGLLEPGGMQWMTAGRGLVHSELPEQE+GLMSG Sbjct: 63 PDHPHRGFETVTYMLAGRMRHRDNAGNEGLLEPGGMQWMTAGRGLVHSELPEQENGLMSG 122 Query: 120 FQLWVNLAGRDKMTTPGYSDIPSAQIPEVTPQDGVQVRVLAGQAFGVKGAVERPTTAPLY 179 FQLWVNLAG+DKMT PGY DIP+A IPE +PQ GV+VRVLAG AFG GA+ R TT PLY Sbjct: 123 FQLWVNLAGKDKMTEPGYQDIPAAGIPETSPQPGVRVRVLAGSAFGTDGAIRRATTEPLY 182 Query: 180 LDLHVQADKRLALPIPATHNAFLYVYEGELLVGQ---DQRVAAAGRMAILSNTAGAEGVD 236 LDL ++A LALPIPATHNAFLYVYEG L VG + R A AGRMA+LSN G+ Sbjct: 183 LDLALEAGTTLALPIPATHNAFLYVYEGALAVGAADGETRPAEAGRMAVLSNVPGSA--- 239 Query: 237 GVEIEASKESRFLLIAGQPLNEPIAQWGPFVMNTREEVEQAIDDFRAGKF 286 GV + A + SRFLLIAG+PLNEPI QWGPFVMNTRE+VEQAIDDFRAG+F Sbjct: 240 GVTVRAEQASRFLLIAGKPLNEPITQWGPFVMNTREQVEQAIDDFRAGRF 289 >emb|CBJ39110.1| Conserved pirin-related protein [Ralstonia solanacearum CMR15] Length = 290 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 192/288 (66%), Positives = 226/288 (78%), Gaps = 11/288 (3%) Query: 7 RQLERLVNGIPTQDGAGVSLTRVLTHDLQRRLDPFLMLDAFHSDKPDDYLAGFPDHPHRG 66 R++ER+V G T DGAGV LTRVLT LQRRLDPFLMLDAF SD P+DYLAGFPDHPHRG Sbjct: 5 RRVERIVTGSATSDGAGVRLTRVLTQPLQRRLDPFLMLDAFRSDDPNDYLAGFPDHPHRG 64 Query: 67 FETVTYMLQGRMRHRDNAGNEGLLEPGGMQWMTAGRGLVHSELPEQEDGLMSGFQLWVNL 126 FETVTYM+ GRMRHRDNAG+EGLL+ GG+QWMTAG G+VHSE+PEQEDG+M GFQLW+NL Sbjct: 65 FETVTYMIAGRMRHRDNAGHEGLLQTGGVQWMTAGSGIVHSEMPEQEDGVMEGFQLWLNL 124 Query: 127 AGRDKMTTPGYSDIPSAQIPEVTPQDGVQVRVLAGQAFGVKGAVERPTTAPLYLDLHVQA 186 RDKMTTP Y DIPSA+IPE T + GV VRV+AG++ GV+GA+ R T PLYLDL + A Sbjct: 125 PARDKMTTPWYRDIPSAEIPEFTTEGGVAVRVIAGESHGVQGAMTRDATQPLYLDLSLPA 184 Query: 187 DKRLALPIPATHNAFLYVYEGELLVGQDQRVAAAG-------RMAILSNTAGAEGVDGVE 239 A P+PA HNAF+YV+ G +VG Q +AG +MAIL+NT EG DGV Sbjct: 185 GATFAQPLPARHNAFVYVFRGSAMVGDAQAPGSAGLQRVDDKQMAILANT---EGSDGVV 241 Query: 240 IEASKE-SRFLLIAGQPLNEPIAQWGPFVMNTREEVEQAIDDFRAGKF 286 I A +R LL+AGQPLNEPIAQ+GPFVMNT+EE+ QA+ DF+AGKF Sbjct: 242 IRAGDAPARVLLVAGQPLNEPIAQYGPFVMNTQEEIFQAVRDFQAGKF 289 >ref|NP_518662.1| pirin-like protein [Ralstonia solanacearum GMI1000] emb|CAD14069.1| probable pirin-like protein [Ralstonia solanacearum GMI1000] Length = 298 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 192/288 (66%), Positives = 224/288 (77%), Gaps = 11/288 (3%) Query: 7 RQLERLVNGIPTQDGAGVSLTRVLTHDLQRRLDPFLMLDAFHSDKPDDYLAGFPDHPHRG 66 R++ER+V G T DGAGV LTRVLT LQRRLDPFLMLDAF SD P+DYLAGFPDHPHRG Sbjct: 13 RRVERVVTGHATSDGAGVRLTRVLTQPLQRRLDPFLMLDAFRSDDPNDYLAGFPDHPHRG 72 Query: 67 FETVTYMLQGRMRHRDNAGNEGLLEPGGMQWMTAGRGLVHSELPEQEDGLMSGFQLWVNL 126 FETVTYM+ GRMRHRDNAG+EGLL+ GG+QWMTAG G+VHSE+PEQEDG+M GFQLW+NL Sbjct: 73 FETVTYMIAGRMRHRDNAGHEGLLQTGGVQWMTAGSGIVHSEMPEQEDGVMEGFQLWLNL 132 Query: 127 AGRDKMTTPGYSDIPSAQIPEVTPQDGVQVRVLAGQAFGVKGAVERPTTAPLYLDLHVQA 186 RDKMTTP Y DIPSA+IP T + GV VRV+AG++ GV+GA+ R T PLYLDL + A Sbjct: 133 PARDKMTTPWYRDIPSAEIPGFTTEGGVAVRVIAGESHGVQGAMTRDATQPLYLDLSLPA 192 Query: 187 DKRLALPIPATHNAFLYVYEGELLVGQDQRVAAAG-------RMAILSNTAGAEGVDGVE 239 A P+PA HNAF+YV+ G LVG Q AG +MAIL+NT EG DGV Sbjct: 193 GTAFAQPLPARHNAFVYVFRGSALVGDAQAPGGAGLQRVDDKQMAILANT---EGSDGVV 249 Query: 240 IEASKE-SRFLLIAGQPLNEPIAQWGPFVMNTREEVEQAIDDFRAGKF 286 I A +R LL+AGQPLNEPIAQ+GPFVMNT+EE+ QA+ DF+AGKF Sbjct: 250 IRADDAPARVLLVAGQPLNEPIAQYGPFVMNTQEEIFQAVRDFQAGKF 297 >ref|YP_001898011.1| Pirin domain-containing protein [Ralstonia pickettii 12J] ref|ZP_07674528.1| oxidoreductase, short-chain dehydrogenase/reductase family [Ralstonia sp. 5_7_47FAA] gb|ACD25579.1| Pirin domain protein [Ralstonia pickettii 12J] gb|EFP67112.1| oxidoreductase, short-chain dehydrogenase/reductase family [Ralstonia sp. 5_7_47FAA] Length = 298 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 187/288 (64%), Positives = 225/288 (78%), Gaps = 11/288 (3%) Query: 7 RQLERLVNGIPTQDGAGVSLTRVLTHDLQRRLDPFLMLDAFHSDKPDDYLAGFPDHPHRG 66 R +ER++ G PT DGAGV LTRVLT++LQRRLDPFLMLDAF SD P+DYLAGFPDHPHRG Sbjct: 13 RLVERIITGRPTSDGAGVKLTRVLTNNLQRRLDPFLMLDAFRSDDPNDYLAGFPDHPHRG 72 Query: 67 FETVTYMLQGRMRHRDNAGNEGLLEPGGMQWMTAGRGLVHSELPEQEDGLMSGFQLWVNL 126 FETVTYM+ GRMRHRD+AG+EGLL+ GG+QWMTAG G+VHSE+PEQEDG+M GFQLW+NL Sbjct: 73 FETVTYMIAGRMRHRDSAGHEGLLQHGGVQWMTAGSGVVHSEMPEQEDGVMEGFQLWLNL 132 Query: 127 AGRDKMTTPGYSDIPSAQIPEVTPQDGVQVRVLAGQAFGVKGAVERPTTAPLYLDLHVQA 186 DKMTTP Y DIPS +IPE T +DGV VRV+AG++ GV+GA+ R T PLYLD+ + A Sbjct: 133 PASDKMTTPWYRDIPSNEIPEFTTEDGVAVRVIAGESHGVQGAMTREATQPLYLDITLPA 192 Query: 187 DKRLALPIPATHNAFLYVYEGELLVGQDQRVAAAG-------RMAILSNTAGAEGVDGVE 239 A +PA HNAF+YV+ G LVG + AG +MAIL+NT EG DGV Sbjct: 193 GASFAQRLPAGHNAFVYVFRGSALVGDAEASGDAGLQRVEDKQMAILANT---EGSDGVV 249 Query: 240 IEA-SKESRFLLIAGQPLNEPIAQWGPFVMNTREEVEQAIDDFRAGKF 286 I A E+R LL+AG+PLNE IAQ+GPFVMNT+EE+ QA+ DF+AGKF Sbjct: 250 IRAGDAEARVLLVAGKPLNESIAQYGPFVMNTQEEIFQAVRDFQAGKF 297 >ref|YP_003746700.1| hypothetical protein RCFBP_20935 [Ralstonia solanacearum CFBP2957] emb|CBJ44114.1| Conserved pirin-related protein [Ralstonia solanacearum CFBP2957] Length = 298 Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust. Identities = 188/288 (65%), Positives = 225/288 (78%), Gaps = 11/288 (3%) Query: 7 RQLERLVNGIPTQDGAGVSLTRVLTHDLQRRLDPFLMLDAFHSDKPDDYLAGFPDHPHRG 66 R++ER+V G T DGAGV LTRVLT LQRRLDPFLMLDAF SD P+DYLAGFPDHPHRG Sbjct: 13 RRVERIVTGHATSDGAGVRLTRVLTQPLQRRLDPFLMLDAFRSDDPNDYLAGFPDHPHRG 72 Query: 67 FETVTYMLQGRMRHRDNAGNEGLLEPGGMQWMTAGRGLVHSELPEQEDGLMSGFQLWVNL 126 FETVTYM+ GRMRHRD+AG+EGLL+ GG+QWMTAGRG+VHSE+PEQEDG+M GFQLW+NL Sbjct: 73 FETVTYMIAGRMRHRDSAGHEGLLQTGGVQWMTAGRGVVHSEMPEQEDGVMEGFQLWLNL 132 Query: 127 AGRDKMTTPGYSDIPSAQIPEVTPQDGVQVRVLAGQAFGVKGAVERPTTAPLYLDLHVQA 186 RDKMTTP Y DIPSA+IP T +DGV VRV+AG++ GV+GA+ R T PLYLD+ + A Sbjct: 133 PARDKMTTPWYRDIPSAEIPGFTTEDGVAVRVIAGESHGVQGAMTREATRPLYLDISLPA 192 Query: 187 DKRLALPIPATHNAFLYVYEGELLVGQDQRVAAAG-------RMAILSNTAGAEGVDGVE 239 P+PA HNAF+YV+ G LVG Q AG +MAIL+NT EG DGV Sbjct: 193 GAVFTQPLPARHNAFVYVFRGSALVGDAQAPGDAGLQRVDDKQMAILANT---EGSDGVA 249 Query: 240 IEASKE-SRFLLIAGQPLNEPIAQWGPFVMNTREEVEQAIDDFRAGKF 286 I A +R LL+AGQPL+EPIAQ+GPFVMN++E++ QA+ DF+AGKF Sbjct: 250 IRAGDAPARVLLVAGQPLDEPIAQYGPFVMNSQEDIFQAVRDFQAGKF 297