BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0015.p (213 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775943.1| major facilitator superfamily permease [Herb... 275 3e-72 ref|ZP_02927343.1| hypothetical protein VspiD_11875 [Verrucomicr... 271 5e-71 ref|ZP_02887326.1| major facilitator superfamily MFS_1 [Burkhold... 248 5e-64 ref|YP_004229062.1| major facilitator superfamily protein [Burkh... 221 5e-56 ref|ZP_02887470.1| major facilitator superfamily MFS_1 [Burkhold... 221 7e-56 >ref|YP_003775943.1| major facilitator superfamily permease [Herbaspirillum seropedicae SmR1] gb|ADJ64035.1| permease of the major facilitator superfamily protein [Herbaspirillum seropedicae SmR1] Length = 417 Score = 275 bits (703), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 153/196 (78%), Positives = 171/196 (87%), Gaps = 2/196 (1%) Query: 13 ASLPDSYGSGYRNARILAICQGLFTCAISIDLTLTALTGYQLAPDKSLATLPFALITVAG 72 AS PD+ SG RNAR+LA+CQGLFTCAISIDLTLTALTG+QLAPDKSLATLPFALITVAG Sbjct: 11 ASAPDA--SGARNARVLALCQGLFTCAISIDLTLTALTGWQLAPDKSLATLPFALITVAG 68 Query: 73 AVVTWFAAFLIQRLGRRLSFALGALAGAIGGAISVWSVFHGHFWSFCIGTAGVGVFQAFA 132 AVVTWFAAFLIQRLGRR SF LGA + +GG +SVWSV+ GHFWSFC GTA VGVFQAFA Sbjct: 69 AVVTWFAAFLIQRLGRRWSFVLGAASCCVGGLVSVWSVWQGHFWSFCAGTALVGVFQAFA 128 Query: 133 QYYRLAAADAVSAEFKSRAISTVLTGGVIAAVLGPALASWSKDLFPTALFSGAYLMVALL 192 QYYRLAAADAV KSRAI+TVL GGVIAA++GPALA+WSKD PTALF+GAYL+VA + Sbjct: 129 QYYRLAAADAVPEAAKSRAIATVLAGGVIAALVGPALAAWSKDWIPTALFAGAYLVVAAM 188 Query: 193 SLLSMIVLLVFYRDTE 208 LLS++ LL+FYRD Sbjct: 189 GLLSVLALLLFYRDQP 204 >ref|ZP_02927343.1| hypothetical protein VspiD_11875 [Verrucomicrobium spinosum DSM 4136] Length = 405 Score = 271 bits (692), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 136/188 (72%), Positives = 160/188 (85%) Query: 23 YRNARILAICQGLFTCAISIDLTLTALTGYQLAPDKSLATLPFALITVAGAVVTWFAAFL 82 +RNARILA+CQ L+ CAISIDLTLT LTGY+LAPDKSLATLPFA+ITV+GA V++FAAFL Sbjct: 8 HRNARILAVCQALYICAISIDLTLTGLTGYELAPDKSLATLPFAMITVSGAGVSYFAAFL 67 Query: 83 IQRLGRRLSFALGALAGAIGGAISVWSVFHGHFWSFCIGTAGVGVFQAFAQYYRLAAADA 142 +Q LGRRL F LGAL GA+GG ISVW+V G FW FC GTAGVGV+QAFA YYRLAAADA Sbjct: 68 LQWLGRRLGFTLGALIGAVGGGISVWAVMEGRFWLFCAGTAGVGVYQAFALYYRLAAADA 127 Query: 143 VSAEFKSRAISTVLTGGVIAAVLGPALASWSKDLFPTALFSGAYLMVALLSLLSMIVLLV 202 V E KSRAISTVL GGV+AA++GPALA+WSKDL P+ALF+GAYLMVALL +++ +L Sbjct: 128 VEPEAKSRAISTVLAGGVLAAIIGPALAAWSKDLIPSALFAGAYLMVALLGVIAAGLLWT 187 Query: 203 FYRDTEAV 210 FY D + + Sbjct: 188 FYCDGDPI 195 >ref|ZP_02887326.1| major facilitator superfamily MFS_1 [Burkholderia graminis C4D1M] gb|EDT07114.1| major facilitator superfamily MFS_1 [Burkholderia graminis C4D1M] Length = 416 Score = 248 bits (633), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 125/201 (62%), Positives = 161/201 (80%), Gaps = 3/201 (1%) Query: 11 SRASLPDSYGSGYR--NARILAICQGLFTCAISIDLTLTALTGYQLAPDKSLATLPFALI 68 +R S+ +G R NA +L++ QGL+T A++IDLTLT LTGYQLAPDKSLATLPFALI Sbjct: 3 TRKKEATSFDTGVRQSNAVVLSVAQGLYTAAVAIDLTLTGLTGYQLAPDKSLATLPFALI 62 Query: 69 TVAGAVVTWFAAFLIQRLGRRLSFALGALAGAIGGAISVWSVFHGHFWSFCIGTAGVGVF 128 TVA A+ T FA+ L+Q++GRR F +GA GA+GG +SVW++ FW FC+GTA VG+F Sbjct: 63 TVASAIATLFASLLMQKIGRRRGFVIGAATGALGGLVSVWAILQNDFWWFCLGTAAVGIF 122 Query: 129 QAFAQYYRLAAADAVSAEFKSRAISTVLTGGVIAAVLGPALASWSKDLFPTALFSGAYLM 188 QAFAQYYRLAAAD+V+ + K++AIS VL GGVIAA+LGPALA+WSK+LFPT LF+G+YLM Sbjct: 123 QAFAQYYRLAAADSVAPQQKAKAISMVLAGGVIAAILGPALAAWSKNLFPT-LFAGSYLM 181 Query: 189 VALLSLLSMIVLLVFYRDTEA 209 V LL + S++VL+ +RD EA Sbjct: 182 VFLLGVGSILVLVFGFRDVEA 202 >ref|YP_004229062.1| major facilitator superfamily protein [Burkholderia sp. CCGE1001] gb|ADX56002.1| major facilitator superfamily MFS_1 [Burkholderia sp. CCGE1001] Length = 417 Score = 221 bits (564), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 126/200 (63%), Positives = 153/200 (76%), Gaps = 3/200 (1%) Query: 17 DSYGS---GYRNARILAICQGLFTCAISIDLTLTALTGYQLAPDKSLATLPFALITVAGA 73 D +GS G R AR+LA+CQ L+T ++SIDLTLT L GY LA DK+LATLPF+LITVA A Sbjct: 14 DRHGSDPEGRRAARVLAVCQALYTSSVSIDLTLTGLVGYTLADDKALATLPFSLITVAAA 73 Query: 74 VVTWFAAFLIQRLGRRLSFALGALAGAIGGAISVWSVFHGHFWSFCIGTAGVGVFQAFAQ 133 + T FA+FL+ R+GRR F LGA GA+GGA+SVW++FH FW+FC GTA VGVFQAFAQ Sbjct: 74 LTTIFASFLMARIGRRAGFVLGAGVGALGGAVSVWAIFHHDFWAFCAGTATVGVFQAFAQ 133 Query: 134 YYRLAAADAVSAEFKSRAISTVLTGGVIAAVLGPALASWSKDLFPTALFSGAYLMVALLS 193 YYRLAAADAV E KSRAISTVLTGGV+AAV GP LA+WSKD F+G+Y +V L Sbjct: 134 YYRLAAADAVGLEGKSRAISTVLTGGVVAAVCGPLLAAWSKDWLAPVAFAGSYALVTGLG 193 Query: 194 LLSMIVLLVFYRDTEAVGGA 213 L S+++L++ YRD V A Sbjct: 194 LASIVLLMLLYRDMAPVPAA 213 >ref|ZP_02887470.1| major facilitator superfamily MFS_1 [Burkholderia graminis C4D1M] gb|EDT06944.1| major facilitator superfamily MFS_1 [Burkholderia graminis C4D1M] Length = 427 Score = 221 bits (562), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 123/191 (64%), Positives = 150/191 (78%), Gaps = 2/191 (1%) Query: 16 PDSYGSGYRNARILAICQGLFTCAISIDLTLTALTGYQLAPDKSLATLPFALITVAGAVV 75 PD +G R AR+LA+CQ L+T ++SIDLTLT L GY LA DK+LATLPF+LITVA A+ Sbjct: 28 PDPHGR--RAARVLAVCQALYTSSVSIDLTLTGLVGYTLADDKALATLPFSLITVAAALT 85 Query: 76 TWFAAFLIQRLGRRLSFALGALAGAIGGAISVWSVFHGHFWSFCIGTAGVGVFQAFAQYY 135 T FA+FL+ R+GRR F LGA GA+GGA+SVW++FH FW+FC GTA VGVFQAFAQYY Sbjct: 86 TVFASFLMARIGRRAGFVLGAGVGALGGAVSVWAIFHHDFWAFCAGTATVGVFQAFAQYY 145 Query: 136 RLAAADAVSAEFKSRAISTVLTGGVIAAVLGPALASWSKDLFPTALFSGAYLMVALLSLL 195 RLAAADAV E KSRAISTVLTGGV+AAV GP LA+WSKD F+G+Y +V L L Sbjct: 146 RLAAADAVGLEGKSRAISTVLTGGVVAAVCGPLLAAWSKDWLAPVAFAGSYALVTGLGLA 205 Query: 196 SMIVLLVFYRD 206 S+++L++ YRD Sbjct: 206 SIVLLMLLYRD 216