BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0013.p (297 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775945.1| Crp/Fnr family transcription regulator [Herb... 366 2e-99 ref|YP_001099920.1| aerobic, anaerobic respiration, osmotic bala... 334 1e-89 ref|YP_001353329.1| Crp/FNR family transcriptional regulator [Ja... 332 3e-89 ref|ZP_08273907.1| transcriptional regulator, Crp/Fnr family [Ox... 312 4e-83 ref|YP_003776587.1| Crp/Fnr family transcription regulator [Herb... 309 4e-82 >ref|YP_003775945.1| Crp/Fnr family transcription regulator [Herbaspirillum seropedicae SmR1] gb|ADJ64037.1| Crp/Fnr family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 255 Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 174/230 (75%), Positives = 203/230 (88%), Gaps = 3/230 (1%) Query: 28 SLPINAADSPSSPVPV-LQALKAGCASCSLHQLCLPMGLDETDMQRLDQIIGRRRRIKRD 86 SLP A+ SP PV L AL+A C++CS+HQLCLPMGLD+ DMQRL+Q+I RRR++KRD Sbjct: 3 SLP--ASTHKHSPPPVNLHALRASCSACSMHQLCLPMGLDQGDMQRLEQVINRRRKVKRD 60 Query: 87 QSLYRMGDAFDMLYAIRLGHFKTYQVNSNGSQQITGFQMAGELLGMDAIGTGRHQCEAVA 146 ++LYR+ D FDMLYAIRLGHFKT+Q N NG QQITGFQMAGELLGMDAIG G H CEAVA Sbjct: 61 ETLYRLNDKFDMLYAIRLGHFKTFQHNPNGGQQITGFQMAGELLGMDAIGAGHHLCEAVA 120 Query: 147 LEDSEVCEIPFSRLEELFQDMPVLLRQFHRIMSKEISREQGVMLTLNSMSAQQKLAAFLV 206 LEDSEVCEIPF+ LE+LF+DMP LLRQFHR+MS EISREQ VMLTL SM+AQQK+AAFL+ Sbjct: 121 LEDSEVCEIPFASLEDLFRDMPTLLRQFHRMMSLEISREQRVMLTLGSMTAQQKMAAFLL 180 Query: 207 NLSTRYATRGYSASRFQLRMTREEIGNYLGLAVESVSRLLSNLKKNGVVD 256 NLS+RY +RGYS++RFQLRMTREEIGNYLGLAVESVSRLL+N KK+GV++ Sbjct: 181 NLSSRYMSRGYSSTRFQLRMTREEIGNYLGLAVESVSRLLTNFKKSGVIE 230 >ref|YP_001099920.1| aerobic, anaerobic respiration, osmotic balance transcriptional regulator [Herminiimonas arsenicoxydans] emb|CAL61795.1| Transcriptional activator protein anr [Herminiimonas arsenicoxydans] Length = 251 Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 151/221 (68%), Positives = 184/221 (83%) Query: 39 SPVPVLQALKAGCASCSLHQLCLPMGLDETDMQRLDQIIGRRRRIKRDQSLYRMGDAFDM 98 SP ++ A++A CA+CS+HQLCLPMGL E D+ +LDQIIGRRR++ RD LYRM D F Sbjct: 9 SPSIIVSAVRASCATCSMHQLCLPMGLGENDIDKLDQIIGRRRKVPRDGYLYRMDDPFTN 68 Query: 99 LYAIRLGHFKTYQVNSNGSQQITGFQMAGELLGMDAIGTGRHQCEAVALEDSEVCEIPFS 158 LYA+R+GHFKTYQVN+ G QQITGFQMAGELLGMDAI T RH C+A+ALEDSEVCEIPF Sbjct: 69 LYAVRIGHFKTYQVNAGGEQQITGFQMAGELLGMDAISTDRHHCDAIALEDSEVCEIPFP 128 Query: 159 RLEELFQDMPVLLRQFHRIMSKEISREQGVMLTLNSMSAQQKLAAFLVNLSTRYATRGYS 218 RLEELF MP+LLR FHR+MS+EI+REQ VML L +M A+Q+ AAFLVNL++RY RGYS Sbjct: 129 RLEELFGSMPILLRHFHRMMSQEITREQSVMLLLGNMRAEQRFAAFLVNLASRYVARGYS 188 Query: 219 ASRFQLRMTREEIGNYLGLAVESVSRLLSNLKKNGVVDXSS 259 ++ FQLRM+RE+IGNYLGL +ES+SRLLS KK G++ S+ Sbjct: 189 STSFQLRMSREDIGNYLGLTIESISRLLSKFKKQGLLKVSN 229 >ref|YP_001353329.1| Crp/FNR family transcriptional regulator [Janthinobacterium sp. Marseille] gb|ABR90137.1| transcriptional regulator, Crp/Fnr family [Janthinobacterium sp. Marseille] Length = 252 Score = 332 bits (852), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 154/222 (69%), Positives = 182/222 (81%), Gaps = 2/222 (0%) Query: 36 SPSSPVPVL--QALKAGCASCSLHQLCLPMGLDETDMQRLDQIIGRRRRIKRDQSLYRMG 93 SPS+ P L AL+A C++CS+HQLCLPMGL E DM RLD+IIGRRR++ RD LYRMG Sbjct: 5 SPSTTDPALSVNALRASCSTCSMHQLCLPMGLGENDMDRLDKIIGRRRKVARDDYLYRMG 64 Query: 94 DAFDMLYAIRLGHFKTYQVNSNGSQQITGFQMAGELLGMDAIGTGRHQCEAVALEDSEVC 153 DAF LYA+R+GHFKT Q+N+ G QQITGFQM GELLGMDAI T RH C AVALEDSEVC Sbjct: 65 DAFTNLYAVRVGHFKTCQINAGGEQQITGFQMTGELLGMDAISTDRHHCNAVALEDSEVC 124 Query: 154 EIPFSRLEELFQDMPVLLRQFHRIMSKEISREQGVMLTLNSMSAQQKLAAFLVNLSTRYA 213 EIPF RLEELF MP LLR FHR+MS+EI+REQ VML L +M A+Q+ AAFLVNL++RY Sbjct: 125 EIPFPRLEELFGTMPTLLRHFHRMMSQEITREQSVMLLLGNMRAEQRFAAFLVNLASRYM 184 Query: 214 TRGYSASRFQLRMTREEIGNYLGLAVESVSRLLSNLKKNGVV 255 RGYS++ FQLRM+RE+IGNYLGL +ES+SRLLS KK G++ Sbjct: 185 ARGYSSTSFQLRMSREDIGNYLGLTIESISRLLSKFKKQGLL 226 >ref|ZP_08273907.1| transcriptional regulator, Crp/Fnr family [Oxalobacteraceae bacterium IMCC9480] gb|EGF32622.1| transcriptional regulator, Crp/Fnr family [Oxalobacteraceae bacterium IMCC9480] Length = 254 Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 157/218 (72%), Positives = 182/218 (83%) Query: 39 SPVPVLQALKAGCASCSLHQLCLPMGLDETDMQRLDQIIGRRRRIKRDQSLYRMGDAFDM 98 +P + A+KA CASCSLHQLCLPMGLDE D+ RLDQIIGRRRRI+RD++LYRM D F Sbjct: 10 TPAQTIHAIKASCASCSLHQLCLPMGLDEGDINRLDQIIGRRRRIQRDEALYRMEDPFRN 69 Query: 99 LYAIRLGHFKTYQVNSNGSQQITGFQMAGELLGMDAIGTGRHQCEAVALEDSEVCEIPFS 158 LYAIR GHFKT+Q+N G ITGFQMAGELLGMDAI T RH C+AVALEDSEVCEIPF+ Sbjct: 70 LYAIRFGHFKTFQINPGGDTHITGFQMAGELLGMDAISTERHHCDAVALEDSEVCEIPFA 129 Query: 159 RLEELFQDMPVLLRQFHRIMSKEISREQGVMLTLNSMSAQQKLAAFLVNLSTRYATRGYS 218 RLEELF ++P LL FHRIMS+EI REQ VML L +M A+Q+ AAFLVNLS+RYATRGYS Sbjct: 130 RLEELFGEIPRLLHHFHRIMSQEIMREQNVMLLLGNMRAEQRFAAFLVNLSSRYATRGYS 189 Query: 219 ASRFQLRMTREEIGNYLGLAVESVSRLLSNLKKNGVVD 256 A+ FQLRM+RE+IGNYLGL +ES+SRLLS KK G ++ Sbjct: 190 ATSFQLRMSREDIGNYLGLTIESISRLLSRFKKQGWLE 227 >ref|YP_003776587.1| Crp/Fnr family transcription regulator [Herbaspirillum seropedicae SmR1] gb|ADJ64679.1| Crp/Fnr family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 278 Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 146/239 (61%), Positives = 188/239 (78%), Gaps = 10/239 (4%) Query: 25 SPMSLPINAADSPSSPVPVLQALKA--------GCASCSLHQLCLPMGLDETDMQRLDQI 76 +P++ P NAA +P + L A + C +C +HQLCLPMGLDE+DM+RLD+I Sbjct: 8 TPITTPANAA-APLTHCSSLTAAREAAASSALRSCTACGMHQLCLPMGLDESDMKRLDKI 66 Query: 77 IGRRRRIKRDQSLYRMGDAFDMLYAIRLGHFKTYQVNSNGSQQITGFQMAGELLGMDAIG 136 IGRR+ + RD LYR+GD F LYA+R+GHFKTYQ N +G +QITGFQM GELLGMDAI Sbjct: 67 IGRRK-VARDDFLYRIGDRFTALYAVRVGHFKTYQENLDGDRQITGFQMPGELLGMDAIS 125 Query: 137 TGRHQCEAVALEDSEVCEIPFSRLEELFQDMPVLLRQFHRIMSKEISREQGVMLTLNSMS 196 T +HQC+AVAL+DSEVCEIPF+RLE+LF +P LLR FHRIMS EI+ EQ V++ L +M Sbjct: 126 TEQHQCDAVALQDSEVCEIPFARLEQLFGQIPHLLRHFHRIMSHEITSEQNVIMLLGNMR 185 Query: 197 AQQKLAAFLVNLSTRYATRGYSASRFQLRMTREEIGNYLGLAVESVSRLLSNLKKNGVV 255 A+Q+ AAFLVNLS+RYA RGYS++RFQLRMTR+++GNYLGL +ES+SRL+S +K G++ Sbjct: 186 AEQRFAAFLVNLSSRYAARGYSSTRFQLRMTRQDVGNYLGLTIESISRLISKFRKQGLL 244