BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0010.p (237 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775948.1| 3',5'-cyclic-nucleotide phosphodiesterase [H... 351 5e-95 ref|YP_001619946.1| hypothetical protein sce9293 [Sorangium cell... 252 3e-65 ref|NP_109524.1| 3',5'-cyclic-nucleotide phosphodiesterase CpdA-... 219 4e-55 ref|NP_108257.1| 3',5'-cyclic-nucleotide phosphodiesterase [Meso... 215 5e-54 ref|YP_002297569.1| 3',5'-cyclic-nucleotide phosphodiesterase, p... 179 4e-43 >ref|YP_003775948.1| 3',5'-cyclic-nucleotide phosphodiesterase [Herbaspirillum seropedicae SmR1] gb|ADJ64040.1| 3',5'-cyclic-nucleotide phosphodiesterase protein [Herbaspirillum seropedicae SmR1] Length = 279 Score = 351 bits (901), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 173/267 (64%), Positives = 200/267 (74%), Gaps = 33/267 (12%) Query: 1 MRTIVHLSDLHFGRIDEALIAPIIAQIHELAPDLIVVSGDLTQRARSEQFREARQFLDAL 60 MR ++HLSDLHFGR D A+I P+IAQIHEL PDL+VVSGDLTQRARS QFR+ARQFLDAL Sbjct: 1 MRRVIHLSDLHFGRTDPAIIEPLIAQIHELQPDLVVVSGDLTQRARSSQFRQARQFLDAL 60 Query: 61 PQPQIVVPGNHDIPLFNVAARFFSPLTKYRRHITEQLQPIFIDEEIAVIGINTARSLTIK 120 P PQ+VVPGNHD+PLFNVAAR PL KY+RHIT LQP+++D+EIAV+GINTARSLTI+ Sbjct: 61 PTPQLVVPGNHDVPLFNVAARLLQPLRKYKRHITPDLQPLYVDDEIAVVGINTARSLTIQ 120 Query: 121 DGRVNDRQIEVARRELAAVDDHVVKIIVTHHPFDLPSGPQHHDLVGKALPAMRAFAICGA 180 DGRVNDRQIE+ARRELAAV DH+VKIIVTHHPFDLP GPQHH LVG+ALPAMRAFA+CGA Sbjct: 121 DGRVNDRQIELARRELAAVGDHLVKIIVTHHPFDLPPGPQHHGLVGQALPAMRAFALCGA 180 Query: 181 XRGRCG---------------------------------SRGETNSFNVLRVEAHHILVE 207 G RGE NSFNVL++EAH I+V Sbjct: 181 DLLLAGHVHASSAVSSAARYRIAGYSALVVQAGTATSTRGRGEANSFNVLQIEAHQIVVH 240 Query: 208 RMHWQVEQGKFTLGATDAFEQRGNEWF 234 R+ W+ E+ F L A+ F QRG+EWF Sbjct: 241 RLGWRAEERAFGLDASQTFVQRGSEWF 267 >ref|YP_001619946.1| hypothetical protein sce9293 [Sorangium cellulosum 'So ce 56'] emb|CAN99466.1| unnamed protein product [Sorangium cellulosum 'So ce 56'] Length = 269 Score = 252 bits (643), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 133/269 (49%), Positives = 168/269 (62%), Gaps = 34/269 (12%) Query: 1 MRTIVHLSDLHFGRIDEALIAPIIAQIHELAPDLIVVSGDLTQRARSEQFREARQFLDAL 60 MRT+VHLSDLHFGR+D+A++ P+I +I L P ++V+SGDLTQRAR +F EAR FLDAL Sbjct: 1 MRTLVHLSDLHFGRVDKAILRPLIERIGGLEPHVVVISGDLTQRARDAEFAEARAFLDAL 60 Query: 61 PQPQIVVPGNHDIPLFNVAARFFSPLTKYRRHITEQLQPIFIDEEIAVIGINTARSLTIK 120 P P+IVVPGNHD+PL+N+ RFF PL +YR HIT+ L P +D EIAV+GINTARSLTIK Sbjct: 61 PSPRIVVPGNHDVPLYNLFDRFFRPLDRYRSHITDDLSPFHLDAEIAVLGINTARSLTIK 120 Query: 121 DGRVNDRQIEVARRELAAVDDHVVKIIVTHHPFDLPSGPQHHDLVGKALPAMRAFAICG- 179 DGR+N RQ+E + + + + KI+VTHHPFDLP H +VG+A AM A A CG Sbjct: 121 DGRINARQVEGIKARMCDLGPEITKIVVTHHPFDLPENSP-HAIVGRARQAMAAIAGCGV 179 Query: 180 ----------------AXRGRCG----------------SRGETNSFNVLRVEAHHILVE 207 A R G RGE N+FNV+RV+ I +E Sbjct: 180 DVILSGHLHMSHTGHSAERFDAGGHSSLIVQAGTATSTRGRGEQNAFNVIRVDGRKIHIE 239 Query: 208 RMHWQVEQGKFTLGATDAFEQRGNEWFAA 236 R WQ E G F + T+ FE+ W A Sbjct: 240 RYFWQPEDGLFGIAITEHFEETSRGWVRA 268 >ref|NP_109524.1| 3',5'-cyclic-nucleotide phosphodiesterase CpdA-like protein [Mesorhizobium loti MAFF303099] dbj|BAB54863.1| 3',5'-cyclic-nucleotide phosphodiesterase CpdA homolog [Mesorhizobium loti MAFF303099] Length = 269 Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 117/266 (43%), Positives = 157/266 (59%), Gaps = 33/266 (12%) Query: 1 MRTIVHLSDLHFGRIDEALIAPIIAQIHELAPDLIVVSGDLTQRARSEQFREARQFLDAL 60 M+T+VHLSDLHFG+ + L+ I A++ + DL+VVSGDLTQRAR ++F +AR FLD+L Sbjct: 1 MKTLVHLSDLHFGKTESQLVDAIAAEVRAVDSDLLVVSGDLTQRARKDEFLQARAFLDSL 60 Query: 61 PQPQIVVPGNHDIPLFNVAARFFSPLTKYRRHITEQLQPIFIDEEIAVIGINTARSLTIK 120 P P+IVVPGNHD+PL+NV AR +PL++YRR+I P + D E+AV+GINTARSLTIK Sbjct: 61 PGPRIVVPGNHDVPLWNVFARAMTPLSRYRRYIEADTDPFYADSEVAVVGINTARSLTIK 120 Query: 121 DGRVNDRQIEVARRELAAVDDHVVKIIVTHHPFDLPSGPQHHDLVGKALPAMRAFAICGA 180 DGR+N RQ++ A + A + D + +I+VTHHPF+ +VG+A AM AF+ G Sbjct: 121 DGRINVRQLKAATEKFAHMSDDITRIVVTHHPFEGRDLESDDGIVGRADLAMHAFSRSGV 180 Query: 181 X--------RGRCGS-------------------------RGETNSFNVLRVEAHHILVE 207 R GS R NSFN++R+E I VE Sbjct: 181 DIILSGHQHLHRAGSSARRYLIDGYAALLIQAGTAVSSRLRRAANSFNIIRIEHPRISVE 240 Query: 208 RMHWQVEQGKFTLGATDAFEQRGNEW 233 WQ Q F A+ +F Q W Sbjct: 241 CRAWQPSQSGFETSASYSFRQGPGGW 266 >ref|NP_108257.1| 3',5'-cyclic-nucleotide phosphodiesterase [Mesorhizobium loti MAFF303099] dbj|BAB53718.1| 3',5'-cyclic-nucleotide phosphodiesterase [Mesorhizobium loti MAFF303099] Length = 269 Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 115/266 (43%), Positives = 157/266 (59%), Gaps = 33/266 (12%) Query: 1 MRTIVHLSDLHFGRIDEALIAPIIAQIHELAPDLIVVSGDLTQRARSEQFREARQFLDAL 60 M+T+VHLSDLHFG+ + L+ I A++ + DL+VVSGDLTQRAR ++F +AR FLD+L Sbjct: 1 MKTLVHLSDLHFGKTESHLVDAIAAEVRAVDSDLLVVSGDLTQRARKDEFLQARAFLDSL 60 Query: 61 PQPQIVVPGNHDIPLFNVAARFFSPLTKYRRHITEQLQPIFIDEEIAVIGINTARSLTIK 120 P P+IVVPGNHD+PL+NV AR +PL++YRR+I P + D E+AV+GINTARSLTIK Sbjct: 61 PGPRIVVPGNHDVPLWNVFARAMTPLSRYRRYIEADTDPFYADSEVAVVGINTARSLTIK 120 Query: 121 DGRVNDRQIEVARRELAAVDDHVVKIIVTHHPFDLPSGPQHHDLVGKALPAMRAFAICGA 180 +GR+N RQ++ A + A + D + +I+VTHHPF+ +V +A AM AF+ G Sbjct: 121 NGRINVRQLKAATEKFAYMSDDITRIVVTHHPFEGLDLESDDGIVARADLAMDAFSRSGV 180 Query: 181 ---XRG-----RCGS-------------------------RGETNSFNVLRVEAHHILVE 207 G R GS R NSFN++R+E I +E Sbjct: 181 DIILSGHQHLHRAGSSARRYLIDGYAALLVQAGTAVSSRVRQAANSFNIIRIEHPRISIE 240 Query: 208 RMHWQVEQGKFTLGATDAFEQRGNEW 233 WQ Q F A+ +F Q W Sbjct: 241 CRAWQSLQSGFETSASYSFRQGSGGW 266 >ref|YP_002297569.1| 3',5'-cyclic-nucleotide phosphodiesterase, putative [Rhodospirillum centenum SW] gb|ACI98756.1| 3',5'-cyclic-nucleotide phosphodiesterase, putative [Rhodospirillum centenum SW] Length = 286 Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 107/268 (39%), Positives = 141/268 (52%), Gaps = 37/268 (13%) Query: 1 MRTIVHLSDLHFGRIDEALIAPIIAQIHELAPDLIVVSGDLTQRARSEQFREARQFLDAL 60 MR I H+SDLHFGRID A++A + + APDLIVVSGDLTQRAR QFR AR FL L Sbjct: 1 MRRIAHISDLHFGRIDPAVVAALRDDLAAQAPDLIVVSGDLTQRARPSQFRAARAFLADL 60 Query: 61 PQPQIVVPGNHDIPLFNVAARFFSPLTKYRRHITEQLQPIFIDEEIAVIGINTARSLTIK 120 P P +VVPGNHD+P FN+ AR PL YRR+I E L P +AV+G+NT+RSL + Sbjct: 61 PAPHMVVPGNHDLPAFNLLARLVDPLRNYRRYIAEDLDPFLNLGNLAVLGLNTSRSLILD 120 Query: 121 --DGRVNDRQIEVARRELAAVDDHVVKIIVTHHPFDLPSGPQHHDLVGKALPAMRAFAIC 178 +GRVN RQ++ L + V K++ THHPF P LVG+A A+RA Sbjct: 121 FAEGRVNQRQMDRILGCLRELGPEVFKVVFTHHPFLPPPDHPGRRLVGRATRALRALEAA 180 Query: 179 GAX--------RGRCGS-------------------------RGETNSFNVLRVEAHHIL 205 G R G R E N++N++ + ++ Sbjct: 181 GVDLLLAGHLHRAYSGDVMSHHAHVERSILVAQASTATSTRLRNEPNAWNLIEIAPPSLV 240 Query: 206 VERMHWQVEQGKFTLGATDAFEQRGNEW 233 + W+ E +F G A+E+ G W Sbjct: 241 LRLRTWEGE--RFMPGLVTAWEKHGPRW 266